Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Mir3105-201ENSMUST00000175480 85 ntBASIC0.03□□□□□ -2.4
Cdc40Q9DC48 Mir8107-201ENSMUST00000184024 117 ntBASIC0.03□□□□□ -2.4
Cdc40Q9DC48 Gm24276-201ENSMUST00000102181 110 ntBASIC0.02□□□□□ -2.41
Cdc40Q9DC48 Gm26158-201ENSMUST00000158973 119 ntBASIC0.02□□□□□ -2.41
Cdc40Q9DC48 Gm27943-201ENSMUST00000184844 116 ntBASIC0.02□□□□□ -2.41
Cdc40Q9DC48 AC192091.2-201ENSMUST00000217869 117 ntBASIC0.02□□□□□ -2.41
Cdc40Q9DC48 AC134601.1-201ENSMUST00000221058 109 ntBASIC0.02□□□□□ -2.41
Cdc40Q9DC48 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC0.02□□□□□ -2.41
Cdc40Q9DC48 Snord95-201ENSMUST00000082846 68 ntBASIC0.02□□□□□ -2.41
Cdc40Q9DC48 Mir489-201ENSMUST00000093599 107 ntBASIC0.02□□□□□ -2.41
Cdc40Q9DC48 Mir541-201ENSMUST00000102097 90 ntBASIC0.01□□□□□ -2.41
Cdc40Q9DC48 Gm25408-201ENSMUST00000104104 133 ntBASIC0.01□□□□□ -2.41
Cdc40Q9DC48 Gm6897-201ENSMUST00000117714 138 ntBASIC0.01□□□□□ -2.41
Cdc40Q9DC48 Gm14758-201ENSMUST00000119104 138 ntBASIC0.01□□□□□ -2.41
Cdc40Q9DC48 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.01□□□□□ -2.41
Cdc40Q9DC48 Gm22557-201ENSMUST00000157804 102 ntBASIC0.01□□□□□ -2.41
Cdc40Q9DC48 Gm24903-201ENSMUST00000158131 126 ntBASIC0.01□□□□□ -2.41
Cdc40Q9DC48 Gm25364-201ENSMUST00000158851 107 ntBASIC0.01□□□□□ -2.41
Cdc40Q9DC48 Gm16550-201ENSMUST00000162550 126 ntBASIC0.01□□□□□ -2.41
Cdc40Q9DC48 Gm23047-201ENSMUST00000177661 94 ntBASIC0.01□□□□□ -2.41
Cdc40Q9DC48 Gm27476-201ENSMUST00000183366 104 ntBASIC0.01□□□□□ -2.41
Cdc40Q9DC48 Mir30f-201ENSMUST00000196073 92 ntBASIC0.01□□□□□ -2.41
Cdc40Q9DC48 Gm44345-201ENSMUST00000199560 135 ntBASIC0.01□□□□□ -2.41
Cdc40Q9DC48 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.01□□□□□ -2.41
Cdc40Q9DC48 Gm44989-201ENSMUST00000204749 217 ntBASIC0.01□□□□□ -2.41
Cdc40Q9DC48 Gm25703-201ENSMUST00000083123 151 ntBASIC0.01□□□□□ -2.41
Cdc40Q9DC48 Gm24121-201ENSMUST00000102029 106 ntBASIC0□□□□□ -2.41
Cdc40Q9DC48 Gm15654-201ENSMUST00000152660 300 ntBASIC0□□□□□ -2.41
Cdc40Q9DC48 Gm22079-201ENSMUST00000157592 106 ntBASIC0□□□□□ -2.41
Cdc40Q9DC48 Gm22433-201ENSMUST00000158550 142 ntBASIC0□□□□□ -2.41
Cdc40Q9DC48 Gm44469-201ENSMUST00000198558 79 ntBASIC0□□□□□ -2.41
Cdc40Q9DC48 mt-Ti-201ENSMUST00000082393 69 ntBASIC0□□□□□ -2.41
Cdc40Q9DC48 Gm22738-201ENSMUST00000083440 147 ntBASIC0□□□□□ -2.41
Cdc40Q9DC48 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0□□□□□ -2.41
Cdc40Q9DC48 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
Cdc40Q9DC48 Gm26279-201ENSMUST00000157095 102 ntBASIC-0.01□□□□□ -2.41
Cdc40Q9DC48 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.01□□□□□ -2.41
Cdc40Q9DC48 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.01□□□□□ -2.41
Cdc40Q9DC48 Gm44807-201ENSMUST00000206115 154 ntBASIC-0.01□□□□□ -2.41
Cdc40Q9DC48 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.01□□□□□ -2.41
Cdc40Q9DC48 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.02□□□□□ -2.41
Cdc40Q9DC48 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.02□□□□□ -2.41
Cdc40Q9DC48 Gm23987-201ENSMUST00000117039 129 ntBASIC-0.02□□□□□ -2.41
Cdc40Q9DC48 Gm14001-201ENSMUST00000118847 247 ntBASIC-0.02□□□□□ -2.41
Cdc40Q9DC48 Gm22145-201ENSMUST00000157396 148 ntBASIC-0.02□□□□□ -2.41
Cdc40Q9DC48 Gm24729-201ENSMUST00000158225 137 ntBASIC-0.02□□□□□ -2.41
Cdc40Q9DC48 Gm23003-201ENSMUST00000179948 107 ntBASIC-0.02□□□□□ -2.41
Cdc40Q9DC48 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.02□□□□□ -2.41
Cdc40Q9DC48 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
Cdc40Q9DC48 Mir466p-201ENSMUST00000103925 89 ntBASIC-0.03□□□□□ -2.41
Cdc40Q9DC48 Gm22850-201ENSMUST00000157714 82 ntBASIC-0.03□□□□□ -2.41
Cdc40Q9DC48 Gm22101-201ENSMUST00000157928 103 ntBASIC-0.03□□□□□ -2.41
Cdc40Q9DC48 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.03□□□□□ -2.41
Cdc40Q9DC48 Gm22744-201ENSMUST00000083444 65 ntBASIC-0.03□□□□□ -2.41
Cdc40Q9DC48 Gm23772-201ENSMUST00000104433 102 ntBASIC-0.04□□□□□ -2.42
Cdc40Q9DC48 Gm14626-201ENSMUST00000117619 216 ntBASIC-0.04□□□□□ -2.42
Cdc40Q9DC48 Gm23036-201ENSMUST00000157885 99 ntBASIC-0.04□□□□□ -2.42
Cdc40Q9DC48 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.04□□□□□ -2.42
Cdc40Q9DC48 Gm22946-201ENSMUST00000158558 82 ntBASIC-0.04□□□□□ -2.42
Cdc40Q9DC48 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.04□□□□□ -2.42
Cdc40Q9DC48 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
Cdc40Q9DC48 Mir382-201ENSMUST00000083494 76 ntBASIC-0.04□□□□□ -2.42
Cdc40Q9DC48 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.05□□□□□ -2.42
Cdc40Q9DC48 Gm24238-201ENSMUST00000157792 98 ntBASIC-0.05□□□□□ -2.42
Cdc40Q9DC48 Gm23892-201ENSMUST00000158105 130 ntBASIC-0.05□□□□□ -2.42
Cdc40Q9DC48 Gm27905-201ENSMUST00000184005 207 ntBASIC-0.05□□□□□ -2.42
Cdc40Q9DC48 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.05□□□□□ -2.42
Cdc40Q9DC48 Snord82-201ENSMUST00000082889 70 ntBASIC-0.05□□□□□ -2.42
Cdc40Q9DC48 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.05□□□□□ -2.42
Cdc40Q9DC48 Mir9-2-201ENSMUST00000083490 72 ntBASIC-0.05□□□□□ -2.42
Cdc40Q9DC48 Gm25610-201ENSMUST00000104016 129 ntBASIC-0.06□□□□□ -2.42
Cdc40Q9DC48 Gm24761-201ENSMUST00000179589 127 ntBASIC-0.06□□□□□ -2.42
Cdc40Q9DC48 AC122320.1-201ENSMUST00000227233 105 ntBASIC-0.06□□□□□ -2.42
Cdc40Q9DC48 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.06□□□□□ -2.42
Cdc40Q9DC48 Mir20b-201ENSMUST00000102087 80 ntBASIC-0.07□□□□□ -2.42
Cdc40Q9DC48 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
Cdc40Q9DC48 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.07□□□□□ -2.42
Cdc40Q9DC48 Gm12469-201ENSMUST00000117623 207 ntBASIC-0.07□□□□□ -2.42
Cdc40Q9DC48 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.07□□□□□ -2.42
Cdc40Q9DC48 Gm22612-201ENSMUST00000158293 101 ntBASIC-0.07□□□□□ -2.42
Cdc40Q9DC48 Gm26360-201ENSMUST00000158872 103 ntBASIC-0.07□□□□□ -2.42
Cdc40Q9DC48 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC-0.07□□□□□ -2.42
Cdc40Q9DC48 Gm37586-201ENSMUST00000193654 204 ntBASIC-0.07□□□□□ -2.42
Cdc40Q9DC48 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC-0.07□□□□□ -2.42
Cdc40Q9DC48 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.08□□□□□ -2.42
Cdc40Q9DC48 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.08□□□□□ -2.42
Cdc40Q9DC48 Snora15-201ENSMUST00000177461 131 ntBASIC-0.08□□□□□ -2.42
Cdc40Q9DC48 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.08□□□□□ -2.42
Cdc40Q9DC48 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.09□□□□□ -2.42
Cdc40Q9DC48 Mir1191-201ENSMUST00000116883 120 ntBASIC-0.09□□□□□ -2.42
Cdc40Q9DC48 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.09□□□□□ -2.42
Cdc40Q9DC48 Gm25390-201ENSMUST00000157341 103 ntBASIC-0.09□□□□□ -2.42
Cdc40Q9DC48 Gm25329-201ENSMUST00000158041 126 ntBASIC-0.09□□□□□ -2.42
Cdc40Q9DC48 Gm25654-201ENSMUST00000158467 88 ntBASIC-0.09□□□□□ -2.42
Cdc40Q9DC48 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.09□□□□□ -2.42
Cdc40Q9DC48 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.09□□□□□ -2.42
Cdc40Q9DC48 Mir201-201ENSMUST00000083470 66 ntBASIC-0.09□□□□□ -2.42
Cdc40Q9DC48 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.09□□□□□ -2.42
Cdc40Q9DC48 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.09□□□□□ -2.42
Cdc40Q9DC48 Mir672-201ENSMUST00000102331 100 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 76,532 protein–RNA pairs in 158.2 ms