Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-0.11□□□□□ -2.43
Ccdc3Q9D6Y1 Gm12815-201ENSMUST00000121737 135 ntBASIC-0.11□□□□□ -2.43
Ccdc3Q9D6Y1 Gm22815-201ENSMUST00000157451 62 ntBASIC-0.11□□□□□ -2.43
Ccdc3Q9D6Y1 Gm22433-201ENSMUST00000158550 142 ntBASIC-0.11□□□□□ -2.43
Ccdc3Q9D6Y1 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.11□□□□□ -2.43
Ccdc3Q9D6Y1 Gm25935-201ENSMUST00000178746 107 ntBASIC-0.11□□□□□ -2.43
Ccdc3Q9D6Y1 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.11□□□□□ -2.43
Ccdc3Q9D6Y1 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.11□□□□□ -2.43
Ccdc3Q9D6Y1 Mir186-201ENSMUST00000083497 71 ntBASIC-0.11□□□□□ -2.43
Ccdc3Q9D6Y1 Gm11322-201ENSMUST00000118095 435 ntBASIC-0.12□□□□□ -2.43
Ccdc3Q9D6Y1 Gm28020-201ENSMUST00000157739 67 ntBASIC-0.12□□□□□ -2.43
Ccdc3Q9D6Y1 Gm25015-201ENSMUST00000158400 128 ntBASIC-0.12□□□□□ -2.43
Ccdc3Q9D6Y1 Gm22434-201ENSMUST00000158549 122 ntBASIC-0.12□□□□□ -2.43
Ccdc3Q9D6Y1 Gm25769-201ENSMUST00000158569 127 ntBASIC-0.12□□□□□ -2.43
Ccdc3Q9D6Y1 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.12□□□□□ -2.43
Ccdc3Q9D6Y1 Gm44373-201ENSMUST00000196112 169 ntBASIC-0.12□□□□□ -2.43
Ccdc3Q9D6Y1 Gm44807-201ENSMUST00000206115 154 ntBASIC-0.12□□□□□ -2.43
Ccdc3Q9D6Y1 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.12□□□□□ -2.43
Ccdc3Q9D6Y1 Snord85-201ENSMUST00000083262 73 ntBASIC-0.12□□□□□ -2.43
Ccdc3Q9D6Y1 Gm25111-201ENSMUST00000116686 147 ntBASIC-0.13□□□□□ -2.43
Ccdc3Q9D6Y1 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.13□□□□□ -2.43
Ccdc3Q9D6Y1 Gm24381-201ENSMUST00000122697 104 ntBASIC-0.13□□□□□ -2.43
Ccdc3Q9D6Y1 n-R5s87-201ENSMUST00000122752 116 ntBASIC-0.13□□□□□ -2.43
Ccdc3Q9D6Y1 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.13□□□□□ -2.43
Ccdc3Q9D6Y1 Gm22079-201ENSMUST00000157592 106 ntBASIC-0.13□□□□□ -2.43
Ccdc3Q9D6Y1 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.13□□□□□ -2.43
Ccdc3Q9D6Y1 AC192091.2-201ENSMUST00000217869 117 ntBASIC-0.13□□□□□ -2.43
Ccdc3Q9D6Y1 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
Ccdc3Q9D6Y1 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.13□□□□□ -2.43
Ccdc3Q9D6Y1 Mir18-201ENSMUST00000083469 96 ntBASIC-0.13□□□□□ -2.43
Ccdc3Q9D6Y1 Mir672-201ENSMUST00000102331 100 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Mir669a-7-201ENSMUST00000180364 87 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Mir669a-6-201ENSMUST00000196127 87 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Mir669a-12-201ENSMUST00000197274 87 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Mir669a-5-201ENSMUST00000197439 87 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Mir669a-10-201ENSMUST00000197745 87 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Mir669a-11-201ENSMUST00000197952 87 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Mir669a-4-201ENSMUST00000198665 87 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Mir669a-9-201ENSMUST00000200087 87 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Mir669a-8-201ENSMUST00000200268 87 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 AC134601.1-201ENSMUST00000221058 109 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Snord19-201ENSMUST00000104609 76 ntBASIC-0.15□□□□□ -2.43
Ccdc3Q9D6Y1 Gm12469-201ENSMUST00000117623 207 ntBASIC-0.15□□□□□ -2.43
Ccdc3Q9D6Y1 Gm14906-201ENSMUST00000119265 390 ntBASIC-0.15□□□□□ -2.43
Ccdc3Q9D6Y1 Gm25267-201ENSMUST00000158522 63 ntBASIC-0.15□□□□□ -2.43
Ccdc3Q9D6Y1 Gm28925-201ENSMUST00000188586 168 ntBASIC-0.15□□□□□ -2.43
Ccdc3Q9D6Y1 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.15□□□□□ -2.43
Ccdc3Q9D6Y1 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
Ccdc3Q9D6Y1 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC-0.16□□□□□ -2.44
Ccdc3Q9D6Y1 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.16□□□□□ -2.44
Ccdc3Q9D6Y1 Mir466f-2-201ENSMUST00000104805 94 ntBASIC-0.16□□□□□ -2.44
Ccdc3Q9D6Y1 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.16□□□□□ -2.44
Ccdc3Q9D6Y1 Gm25223-201ENSMUST00000158200 110 ntBASIC-0.16□□□□□ -2.44
Ccdc3Q9D6Y1 Mir6951-201ENSMUST00000183910 75 ntBASIC-0.16□□□□□ -2.44
Ccdc3Q9D6Y1 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC-0.16□□□□□ -2.44
Ccdc3Q9D6Y1 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.16□□□□□ -2.44
Ccdc3Q9D6Y1 Gm22738-201ENSMUST00000083440 147 ntBASIC-0.16□□□□□ -2.44
Ccdc3Q9D6Y1 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.17□□□□□ -2.44
Ccdc3Q9D6Y1 Gm23772-201ENSMUST00000104433 102 ntBASIC-0.17□□□□□ -2.44
Ccdc3Q9D6Y1 Mir1191-201ENSMUST00000116883 120 ntBASIC-0.17□□□□□ -2.44
Ccdc3Q9D6Y1 Gm23841-201ENSMUST00000116951 114 ntBASIC-0.17□□□□□ -2.44
Ccdc3Q9D6Y1 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.17□□□□□ -2.44
Ccdc3Q9D6Y1 Gm22557-201ENSMUST00000157804 102 ntBASIC-0.17□□□□□ -2.44
Ccdc3Q9D6Y1 Gm25329-201ENSMUST00000158041 126 ntBASIC-0.17□□□□□ -2.44
Ccdc3Q9D6Y1 Gm16550-201ENSMUST00000162550 126 ntBASIC-0.17□□□□□ -2.44
Ccdc3Q9D6Y1 Gm27476-201ENSMUST00000183366 104 ntBASIC-0.17□□□□□ -2.44
Ccdc3Q9D6Y1 Gm37586-201ENSMUST00000193654 204 ntBASIC-0.17□□□□□ -2.44
Ccdc3Q9D6Y1 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.17□□□□□ -2.44
Ccdc3Q9D6Y1 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.17□□□□□ -2.44
Ccdc3Q9D6Y1 Gm22358-201ENSMUST00000082877 122 ntBASIC-0.17□□□□□ -2.44
Ccdc3Q9D6Y1 Gm25188-201ENSMUST00000083913 122 ntBASIC-0.17□□□□□ -2.44
Ccdc3Q9D6Y1 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 Gm6897-201ENSMUST00000117714 138 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 Gm14758-201ENSMUST00000119104 138 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 Gm14883-201ENSMUST00000120179 157 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 Gm26279-201ENSMUST00000157095 102 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 Gm25600-201ENSMUST00000158357 106 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 AC165157.3-201ENSMUST00000220815 103 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 Snora75-201ENSMUST00000082903 133 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 Mir9-2-201ENSMUST00000083490 72 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 Mir489-201ENSMUST00000093599 107 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 Gm24121-201ENSMUST00000102029 106 ntBASIC-0.19□□□□□ -2.44
Ccdc3Q9D6Y1 Gm22850-201ENSMUST00000157714 82 ntBASIC-0.19□□□□□ -2.44
Ccdc3Q9D6Y1 Gm23047-201ENSMUST00000177661 94 ntBASIC-0.19□□□□□ -2.44
Ccdc3Q9D6Y1 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.19□□□□□ -2.44
Ccdc3Q9D6Y1 Mir7657-201ENSMUST00000196051 57 ntBASIC-0.19□□□□□ -2.44
Ccdc3Q9D6Y1 AC158981.3-202ENSMUST00000228906 523 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 139.5 ms