Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-0.11□□□□□ -2.43
Ccdc3Q9D6Y1 Gm12815-201ENSMUST00000121737 135 ntBASIC-0.11□□□□□ -2.43
Ccdc3Q9D6Y1 Gm22815-201ENSMUST00000157451 62 ntBASIC-0.11□□□□□ -2.43
Ccdc3Q9D6Y1 Gm22433-201ENSMUST00000158550 142 ntBASIC-0.11□□□□□ -2.43
Ccdc3Q9D6Y1 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.11□□□□□ -2.43
Ccdc3Q9D6Y1 Gm25935-201ENSMUST00000178746 107 ntBASIC-0.11□□□□□ -2.43
Ccdc3Q9D6Y1 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.11□□□□□ -2.43
Ccdc3Q9D6Y1 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.11□□□□□ -2.43
Ccdc3Q9D6Y1 Mir186-201ENSMUST00000083497 71 ntBASIC-0.11□□□□□ -2.43
Ccdc3Q9D6Y1 Gm11322-201ENSMUST00000118095 435 ntBASIC-0.12□□□□□ -2.43
Ccdc3Q9D6Y1 Gm28020-201ENSMUST00000157739 67 ntBASIC-0.12□□□□□ -2.43
Ccdc3Q9D6Y1 Gm25015-201ENSMUST00000158400 128 ntBASIC-0.12□□□□□ -2.43
Ccdc3Q9D6Y1 Gm22434-201ENSMUST00000158549 122 ntBASIC-0.12□□□□□ -2.43
Ccdc3Q9D6Y1 Gm25769-201ENSMUST00000158569 127 ntBASIC-0.12□□□□□ -2.43
Ccdc3Q9D6Y1 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.12□□□□□ -2.43
Ccdc3Q9D6Y1 Gm44373-201ENSMUST00000196112 169 ntBASIC-0.12□□□□□ -2.43
Ccdc3Q9D6Y1 Gm44807-201ENSMUST00000206115 154 ntBASIC-0.12□□□□□ -2.43
Ccdc3Q9D6Y1 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.12□□□□□ -2.43
Ccdc3Q9D6Y1 Snord85-201ENSMUST00000083262 73 ntBASIC-0.12□□□□□ -2.43
Ccdc3Q9D6Y1 Gm25111-201ENSMUST00000116686 147 ntBASIC-0.13□□□□□ -2.43
Ccdc3Q9D6Y1 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.13□□□□□ -2.43
Ccdc3Q9D6Y1 Gm24381-201ENSMUST00000122697 104 ntBASIC-0.13□□□□□ -2.43
Ccdc3Q9D6Y1 n-R5s87-201ENSMUST00000122752 116 ntBASIC-0.13□□□□□ -2.43
Ccdc3Q9D6Y1 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.13□□□□□ -2.43
Ccdc3Q9D6Y1 Gm22079-201ENSMUST00000157592 106 ntBASIC-0.13□□□□□ -2.43
Ccdc3Q9D6Y1 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.13□□□□□ -2.43
Ccdc3Q9D6Y1 AC192091.2-201ENSMUST00000217869 117 ntBASIC-0.13□□□□□ -2.43
Ccdc3Q9D6Y1 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
Ccdc3Q9D6Y1 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.13□□□□□ -2.43
Ccdc3Q9D6Y1 Mir18-201ENSMUST00000083469 96 ntBASIC-0.13□□□□□ -2.43
Ccdc3Q9D6Y1 Mir672-201ENSMUST00000102331 100 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Mir669a-7-201ENSMUST00000180364 87 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Mir669a-6-201ENSMUST00000196127 87 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Mir669a-12-201ENSMUST00000197274 87 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Mir669a-5-201ENSMUST00000197439 87 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Mir669a-10-201ENSMUST00000197745 87 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Mir669a-11-201ENSMUST00000197952 87 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Mir669a-4-201ENSMUST00000198665 87 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Mir669a-9-201ENSMUST00000200087 87 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Mir669a-8-201ENSMUST00000200268 87 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 AC134601.1-201ENSMUST00000221058 109 ntBASIC-0.14□□□□□ -2.43
Ccdc3Q9D6Y1 Snord19-201ENSMUST00000104609 76 ntBASIC-0.15□□□□□ -2.43
Ccdc3Q9D6Y1 Gm12469-201ENSMUST00000117623 207 ntBASIC-0.15□□□□□ -2.43
Ccdc3Q9D6Y1 Gm14906-201ENSMUST00000119265 390 ntBASIC-0.15□□□□□ -2.43
Ccdc3Q9D6Y1 Gm25267-201ENSMUST00000158522 63 ntBASIC-0.15□□□□□ -2.43
Ccdc3Q9D6Y1 Gm28925-201ENSMUST00000188586 168 ntBASIC-0.15□□□□□ -2.43
Ccdc3Q9D6Y1 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.15□□□□□ -2.43
Ccdc3Q9D6Y1 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
Ccdc3Q9D6Y1 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC-0.16□□□□□ -2.44
Ccdc3Q9D6Y1 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.16□□□□□ -2.44
Ccdc3Q9D6Y1 Mir466f-2-201ENSMUST00000104805 94 ntBASIC-0.16□□□□□ -2.44
Ccdc3Q9D6Y1 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.16□□□□□ -2.44
Ccdc3Q9D6Y1 Gm25223-201ENSMUST00000158200 110 ntBASIC-0.16□□□□□ -2.44
Ccdc3Q9D6Y1 Mir6951-201ENSMUST00000183910 75 ntBASIC-0.16□□□□□ -2.44
Ccdc3Q9D6Y1 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC-0.16□□□□□ -2.44
Ccdc3Q9D6Y1 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.16□□□□□ -2.44
Ccdc3Q9D6Y1 Gm22738-201ENSMUST00000083440 147 ntBASIC-0.16□□□□□ -2.44
Ccdc3Q9D6Y1 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.17□□□□□ -2.44
Ccdc3Q9D6Y1 Gm23772-201ENSMUST00000104433 102 ntBASIC-0.17□□□□□ -2.44
Ccdc3Q9D6Y1 Mir1191-201ENSMUST00000116883 120 ntBASIC-0.17□□□□□ -2.44
Ccdc3Q9D6Y1 Gm23841-201ENSMUST00000116951 114 ntBASIC-0.17□□□□□ -2.44
Ccdc3Q9D6Y1 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.17□□□□□ -2.44
Ccdc3Q9D6Y1 Gm22557-201ENSMUST00000157804 102 ntBASIC-0.17□□□□□ -2.44
Ccdc3Q9D6Y1 Gm25329-201ENSMUST00000158041 126 ntBASIC-0.17□□□□□ -2.44
Ccdc3Q9D6Y1 Gm16550-201ENSMUST00000162550 126 ntBASIC-0.17□□□□□ -2.44
Ccdc3Q9D6Y1 Gm27476-201ENSMUST00000183366 104 ntBASIC-0.17□□□□□ -2.44
Ccdc3Q9D6Y1 Gm37586-201ENSMUST00000193654 204 ntBASIC-0.17□□□□□ -2.44
Ccdc3Q9D6Y1 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.17□□□□□ -2.44
Ccdc3Q9D6Y1 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.17□□□□□ -2.44
Ccdc3Q9D6Y1 Gm22358-201ENSMUST00000082877 122 ntBASIC-0.17□□□□□ -2.44
Ccdc3Q9D6Y1 Gm25188-201ENSMUST00000083913 122 ntBASIC-0.17□□□□□ -2.44
Ccdc3Q9D6Y1 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 Gm6897-201ENSMUST00000117714 138 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 Gm14758-201ENSMUST00000119104 138 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 Gm14883-201ENSMUST00000120179 157 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 Gm26279-201ENSMUST00000157095 102 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 Gm25600-201ENSMUST00000158357 106 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 AC165157.3-201ENSMUST00000220815 103 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 Snora75-201ENSMUST00000082903 133 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 Mir9-2-201ENSMUST00000083490 72 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 Mir489-201ENSMUST00000093599 107 ntBASIC-0.18□□□□□ -2.44
Ccdc3Q9D6Y1 Gm24121-201ENSMUST00000102029 106 ntBASIC-0.19□□□□□ -2.44
Ccdc3Q9D6Y1 Gm22850-201ENSMUST00000157714 82 ntBASIC-0.19□□□□□ -2.44
Ccdc3Q9D6Y1 Gm23047-201ENSMUST00000177661 94 ntBASIC-0.19□□□□□ -2.44
Ccdc3Q9D6Y1 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.19□□□□□ -2.44
Ccdc3Q9D6Y1 Mir7657-201ENSMUST00000196051 57 ntBASIC-0.19□□□□□ -2.44
Ccdc3Q9D6Y1 AC158981.3-202ENSMUST00000228906 523 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 204.4 ms