Protein–RNA interactions for Protein: Q9CZA6

Nde1, Nuclear distribution protein nudE homolog 1, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nde1Q9CZA6 Mir216a-201ENSMUST00000083605 72 ntBASIC0.58□□□□□ -2.32
Nde1Q9CZA6 Gm24030-201ENSMUST00000083931 164 ntBASIC0.58□□□□□ -2.32
Nde1Q9CZA6 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
Nde1Q9CZA6 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
Nde1Q9CZA6 Gm22815-201ENSMUST00000157451 62 ntBASIC0.57□□□□□ -2.32
Nde1Q9CZA6 Gm25901-201ENSMUST00000158494 130 ntBASIC0.57□□□□□ -2.32
Nde1Q9CZA6 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.57□□□□□ -2.32
Nde1Q9CZA6 Mir6390-201ENSMUST00000184405 129 ntBASIC0.57□□□□□ -2.32
Nde1Q9CZA6 Gm28435-201ENSMUST00000185496 108 ntBASIC0.57□□□□□ -2.32
Nde1Q9CZA6 Gm36956-201ENSMUST00000193830 214 ntBASIC0.57□□□□□ -2.32
Nde1Q9CZA6 Gm44338-201ENSMUST00000198614 110 ntBASIC0.57□□□□□ -2.32
Nde1Q9CZA6 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.57□□□□□ -2.32
Nde1Q9CZA6 DQ267101-201ENSMUST00000082562 73 ntBASIC0.57□□□□□ -2.32
Nde1Q9CZA6 Snord61-201ENSMUST00000083176 71 ntBASIC0.57□□□□□ -2.32
Nde1Q9CZA6 Snord33-201ENSMUST00000083694 84 ntBASIC0.57□□□□□ -2.32
Nde1Q9CZA6 Gm25980-201ENSMUST00000157176 218 ntBASIC0.56□□□□□ -2.32
Nde1Q9CZA6 Gm25716-201ENSMUST00000158628 104 ntBASIC0.56□□□□□ -2.32
Nde1Q9CZA6 Mir3094-201ENSMUST00000175121 64 ntBASIC0.56□□□□□ -2.32
Nde1Q9CZA6 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
Nde1Q9CZA6 Gm42506-201ENSMUST00000202009 150 ntBASIC0.56□□□□□ -2.32
Nde1Q9CZA6 Gm25138-201ENSMUST00000083248 136 ntBASIC0.56□□□□□ -2.32
Nde1Q9CZA6 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.55□□□□□ -2.32
Nde1Q9CZA6 Gm22373-201ENSMUST00000104584 89 ntBASIC0.55□□□□□ -2.32
Nde1Q9CZA6 Gm11644-201ENSMUST00000119735 150 ntBASIC0.55□□□□□ -2.32
Nde1Q9CZA6 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.55□□□□□ -2.32
Nde1Q9CZA6 Mir6394-201ENSMUST00000184738 99 ntBASIC0.55□□□□□ -2.32
Nde1Q9CZA6 Mir3969-201ENSMUST00000197106 92 ntBASIC0.55□□□□□ -2.32
Nde1Q9CZA6 Gm44488-201ENSMUST00000199467 119 ntBASIC0.55□□□□□ -2.32
Nde1Q9CZA6 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.55□□□□□ -2.32
Nde1Q9CZA6 Gm23445-201ENSMUST00000082800 107 ntBASIC0.55□□□□□ -2.32
Nde1Q9CZA6 Gm25274-201ENSMUST00000104296 135 ntBASIC0.54□□□□□ -2.32
Nde1Q9CZA6 Gm23991-201ENSMUST00000117033 93 ntBASIC0.54□□□□□ -2.32
Nde1Q9CZA6 Gm14039-201ENSMUST00000118705 101 ntBASIC0.54□□□□□ -2.32
Nde1Q9CZA6 Gm16265-201ENSMUST00000134558 108 ntBASIC0.54□□□□□ -2.32
Nde1Q9CZA6 Gm15654-201ENSMUST00000152660 300 ntBASIC0.54□□□□□ -2.32
Nde1Q9CZA6 Gm24476-201ENSMUST00000157437 131 ntBASIC0.54□□□□□ -2.32
Nde1Q9CZA6 Gm24728-201ENSMUST00000158226 125 ntBASIC0.54□□□□□ -2.32
Nde1Q9CZA6 Gm24678-201ENSMUST00000158756 104 ntBASIC0.54□□□□□ -2.32
Nde1Q9CZA6 Gm24106-201ENSMUST00000175498 127 ntBASIC0.54□□□□□ -2.32
Nde1Q9CZA6 Gm43381-201ENSMUST00000198553 165 ntBASIC0.54□□□□□ -2.32
Nde1Q9CZA6 Gm44807-201ENSMUST00000206115 154 ntBASIC0.54□□□□□ -2.32
Nde1Q9CZA6 Gm22302-201ENSMUST00000082657 106 ntBASIC0.54□□□□□ -2.32
Nde1Q9CZA6 Gm23947-201ENSMUST00000093636 107 ntBASIC0.54□□□□□ -2.32
Nde1Q9CZA6 Gm23320-201ENSMUST00000104462 127 ntBASIC0.53□□□□□ -2.32
Nde1Q9CZA6 Gm26274-201ENSMUST00000157103 321 ntBASIC0.53□□□□□ -2.32
Nde1Q9CZA6 Gm24547-201ENSMUST00000158649 149 ntBASIC0.53□□□□□ -2.32
Nde1Q9CZA6 Gm25444-201ENSMUST00000158999 113 ntBASIC0.53□□□□□ -2.32
Nde1Q9CZA6 Gm16550-201ENSMUST00000162550 126 ntBASIC0.53□□□□□ -2.32
Nde1Q9CZA6 Gm27446-201ENSMUST00000183963 89 ntBASIC0.53□□□□□ -2.32
Nde1Q9CZA6 Mir30f-201ENSMUST00000196073 92 ntBASIC0.53□□□□□ -2.32
Nde1Q9CZA6 Gm44211-201ENSMUST00000204867 145 ntBASIC0.53□□□□□ -2.32
Nde1Q9CZA6 Gm22753-201ENSMUST00000083657 107 ntBASIC0.53□□□□□ -2.32
Nde1Q9CZA6 Gm6272-201ENSMUST00000121256 171 ntBASIC0.52□□□□□ -2.33
Nde1Q9CZA6 Mir1899-201ENSMUST00000122798 96 ntBASIC0.52□□□□□ -2.33
Nde1Q9CZA6 Gm20409-201ENSMUST00000173457 130 ntBASIC0.52□□□□□ -2.33
Nde1Q9CZA6 Gm23416-201ENSMUST00000175520 95 ntBASIC0.52□□□□□ -2.33
Nde1Q9CZA6 Gm28767-201ENSMUST00000188601 114 ntBASIC0.52□□□□□ -2.33
Nde1Q9CZA6 Gm25401-201ENSMUST00000082975 106 ntBASIC0.52□□□□□ -2.33
Nde1Q9CZA6 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.52□□□□□ -2.33
Nde1Q9CZA6 Snord69-201ENSMUST00000104024 80 ntBASIC0.51□□□□□ -2.33
Nde1Q9CZA6 Gm23853-201ENSMUST00000158375 104 ntBASIC0.51□□□□□ -2.33
Nde1Q9CZA6 Gm24549-201ENSMUST00000158647 139 ntBASIC0.51□□□□□ -2.33
Nde1Q9CZA6 Mir1966-201ENSMUST00000158807 108 ntBASIC0.51□□□□□ -2.33
Nde1Q9CZA6 Mir6364-201ENSMUST00000183396 86 ntBASIC0.51□□□□□ -2.33
Nde1Q9CZA6 Mir6985-201ENSMUST00000184641 61 ntBASIC0.51□□□□□ -2.33
Nde1Q9CZA6 Mir7657-201ENSMUST00000196051 57 ntBASIC0.51□□□□□ -2.33
Nde1Q9CZA6 Gm43944-201ENSMUST00000205220 120 ntBASIC0.51□□□□□ -2.33
Nde1Q9CZA6 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.51□□□□□ -2.33
Nde1Q9CZA6 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
Nde1Q9CZA6 Gm24920-201ENSMUST00000083018 85 ntBASIC0.51□□□□□ -2.33
Nde1Q9CZA6 Mir30a-201ENSMUST00000083471 71 ntBASIC0.51□□□□□ -2.33
Nde1Q9CZA6 Mir344-201ENSMUST00000083634 95 ntBASIC0.51□□□□□ -2.33
Nde1Q9CZA6 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Nde1Q9CZA6 Gm25610-201ENSMUST00000104016 129 ntBASIC0.5□□□□□ -2.33
Nde1Q9CZA6 Gm25378-201ENSMUST00000104333 129 ntBASIC0.5□□□□□ -2.33
Nde1Q9CZA6 Gm26011-201ENSMUST00000104410 104 ntBASIC0.5□□□□□ -2.33
Nde1Q9CZA6 Gm11248-201ENSMUST00000119568 201 ntBASIC0.5□□□□□ -2.33
Nde1Q9CZA6 Gm22466-201ENSMUST00000175278 69 ntBASIC0.5□□□□□ -2.33
Nde1Q9CZA6 Gm26236-201ENSMUST00000175536 137 ntBASIC0.5□□□□□ -2.33
Nde1Q9CZA6 Gm27289-201ENSMUST00000183341 82 ntBASIC0.5□□□□□ -2.33
Nde1Q9CZA6 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.5□□□□□ -2.33
Nde1Q9CZA6 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.5□□□□□ -2.33
Nde1Q9CZA6 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.5□□□□□ -2.33
Nde1Q9CZA6 Gm25060-201ENSMUST00000157374 130 ntBASIC0.49□□□□□ -2.33
Nde1Q9CZA6 Gm37545-201ENSMUST00000186512 148 ntBASIC0.49□□□□□ -2.33
Nde1Q9CZA6 Gm23509-201ENSMUST00000083080 160 ntBASIC0.49□□□□□ -2.33
Nde1Q9CZA6 Gm10172-201ENSMUST00000085929 558 ntBASIC0.49□□□□□ -2.33
Nde1Q9CZA6 Gm23253-201ENSMUST00000157441 104 ntBASIC0.48□□□□□ -2.33
Nde1Q9CZA6 Gm24238-201ENSMUST00000157792 98 ntBASIC0.48□□□□□ -2.33
Nde1Q9CZA6 Gm25329-201ENSMUST00000158041 126 ntBASIC0.48□□□□□ -2.33
Nde1Q9CZA6 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.48□□□□□ -2.33
Nde1Q9CZA6 Gm18502-201ENSMUST00000218679 199 ntBASIC0.48□□□□□ -2.33
Nde1Q9CZA6 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.48□□□□□ -2.33
Nde1Q9CZA6 Gm14946-201ENSMUST00000119859 296 ntBASIC0.47□□□□□ -2.33
Nde1Q9CZA6 Gm22522-201ENSMUST00000158271 151 ntBASIC0.47□□□□□ -2.33
Nde1Q9CZA6 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
Nde1Q9CZA6 Gm44458-201ENSMUST00000196594 143 ntBASIC0.47□□□□□ -2.33
Nde1Q9CZA6 Gm43749-201ENSMUST00000199345 352 ntBASIC0.47□□□□□ -2.33
Nde1Q9CZA6 Gm23881-201ENSMUST00000116872 66 ntBASIC0.46□□□□□ -2.34
Nde1Q9CZA6 Gm26484-201ENSMUST00000158018 106 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 136.5 ms