Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm25756-201ENSMUST00000103990 136 ntBASIC-0.74□□□□□ -2.53
Rpa3Q9CQ71 Mir1191-201ENSMUST00000116883 120 ntBASIC-0.74□□□□□ -2.53
Rpa3Q9CQ71 Gm22332-201ENSMUST00000158072 126 ntBASIC-0.74□□□□□ -2.53
Rpa3Q9CQ71 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.74□□□□□ -2.53
Rpa3Q9CQ71 Gm25464-201ENSMUST00000175481 107 ntBASIC-0.74□□□□□ -2.53
Rpa3Q9CQ71 Gm29140-201ENSMUST00000190187 476 ntBASIC-0.74□□□□□ -2.53
Rpa3Q9CQ71 Gm37313-201ENSMUST00000191673 290 ntBASIC-0.74□□□□□ -2.53
Rpa3Q9CQ71 AC153526.1-201ENSMUST00000219750 190 ntBASIC-0.74□□□□□ -2.53
Rpa3Q9CQ71 Gm24929-201ENSMUST00000083403 139 ntBASIC-0.74□□□□□ -2.53
Rpa3Q9CQ71 Gm25773-201ENSMUST00000116718 127 ntBASIC-0.75□□□□□ -2.53
Rpa3Q9CQ71 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.75□□□□□ -2.53
Rpa3Q9CQ71 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.75□□□□□ -2.53
Rpa3Q9CQ71 Gm25364-201ENSMUST00000158851 107 ntBASIC-0.75□□□□□ -2.53
Rpa3Q9CQ71 Gm22364-201ENSMUST00000083097 98 ntBASIC-0.75□□□□□ -2.53
Rpa3Q9CQ71 Gm25328-201ENSMUST00000175013 107 ntBASIC-0.76□□□□□ -2.53
Rpa3Q9CQ71 Gm23567-201ENSMUST00000178005 107 ntBASIC-0.76□□□□□ -2.53
Rpa3Q9CQ71 AC154552.1-201ENSMUST00000222969 202 ntBASIC-0.76□□□□□ -2.53
Rpa3Q9CQ71 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.76□□□□□ -2.53
Rpa3Q9CQ71 Mir363-201ENSMUST00000093598 75 ntBASIC-0.76□□□□□ -2.53
Rpa3Q9CQ71 Gm23219-201ENSMUST00000158123 87 ntBASIC-0.77□□□□□ -2.53
Rpa3Q9CQ71 Gm26401-201ENSMUST00000158502 76 ntBASIC-0.77□□□□□ -2.53
Rpa3Q9CQ71 Mir5624-201ENSMUST00000176635 61 ntBASIC-0.77□□□□□ -2.53
Rpa3Q9CQ71 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.77□□□□□ -2.53
Rpa3Q9CQ71 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC-0.77□□□□□ -2.53
Rpa3Q9CQ71 Gm42623-201ENSMUST00000197225 379 ntBASIC-0.77□□□□□ -2.53
Rpa3Q9CQ71 Gm25588-201ENSMUST00000082501 140 ntBASIC-0.77□□□□□ -2.53
Rpa3Q9CQ71 Gm22032-201ENSMUST00000116946 116 ntBASIC-0.78□□□□□ -2.53
Rpa3Q9CQ71 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.78□□□□□ -2.53
Rpa3Q9CQ71 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.78□□□□□ -2.53
Rpa3Q9CQ71 Gm28008-201ENSMUST00000184021 186 ntBASIC-0.78□□□□□ -2.53
Rpa3Q9CQ71 AC166341.3-201ENSMUST00000221861 114 ntBASIC-0.78□□□□□ -2.53
Rpa3Q9CQ71 Gm11204-201ENSMUST00000122438 147 ntBASIC-0.79□□□□□ -2.54
Rpa3Q9CQ71 Gm26160-201ENSMUST00000158965 63 ntBASIC-0.79□□□□□ -2.54
Rpa3Q9CQ71 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC-0.79□□□□□ -2.54
Rpa3Q9CQ71 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC-0.79□□□□□ -2.54
Rpa3Q9CQ71 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC-0.79□□□□□ -2.54
Rpa3Q9CQ71 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC-0.79□□□□□ -2.54
Rpa3Q9CQ71 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC-0.79□□□□□ -2.54
Rpa3Q9CQ71 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC-0.79□□□□□ -2.54
Rpa3Q9CQ71 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC-0.79□□□□□ -2.54
Rpa3Q9CQ71 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC-0.79□□□□□ -2.54
Rpa3Q9CQ71 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC-0.79□□□□□ -2.54
Rpa3Q9CQ71 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC-0.79□□□□□ -2.54
Rpa3Q9CQ71 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC-0.79□□□□□ -2.54
Rpa3Q9CQ71 Mir7657-201ENSMUST00000196051 57 ntBASIC-0.79□□□□□ -2.54
Rpa3Q9CQ71 Gm24423-201ENSMUST00000101982 106 ntBASIC-0.8□□□□□ -2.54
Rpa3Q9CQ71 Gm23466-201ENSMUST00000157133 106 ntBASIC-0.8□□□□□ -2.54
Rpa3Q9CQ71 Gm24238-201ENSMUST00000157792 98 ntBASIC-0.8□□□□□ -2.54
Rpa3Q9CQ71 Gm25267-201ENSMUST00000158522 63 ntBASIC-0.8□□□□□ -2.54
Rpa3Q9CQ71 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.8□□□□□ -2.54
Rpa3Q9CQ71 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.8□□□□□ -2.54
Rpa3Q9CQ71 Gm22448-201ENSMUST00000179254 107 ntBASIC-0.8□□□□□ -2.54
Rpa3Q9CQ71 Gm25235-201ENSMUST00000179933 107 ntBASIC-0.8□□□□□ -2.54
Rpa3Q9CQ71 Mir6928-201ENSMUST00000185166 70 ntBASIC-0.8□□□□□ -2.54
Rpa3Q9CQ71 Gm37750-201ENSMUST00000193563 129 ntBASIC-0.8□□□□□ -2.54
Rpa3Q9CQ71 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.8□□□□□ -2.54
Rpa3Q9CQ71 Gm23941-201ENSMUST00000101953 107 ntBASIC-0.81□□□□□ -2.54
Rpa3Q9CQ71 Gm25935-201ENSMUST00000178746 107 ntBASIC-0.81□□□□□ -2.54
Rpa3Q9CQ71 Gm18665-201ENSMUST00000189783 270 ntBASIC-0.81□□□□□ -2.54
Rpa3Q9CQ71 Gm44858-201ENSMUST00000207360 154 ntBASIC-0.81□□□□□ -2.54
Rpa3Q9CQ71 Mir181a-1-201ENSMUST00000083631 87 ntBASIC-0.81□□□□□ -2.54
Rpa3Q9CQ71 Gm22790-201ENSMUST00000157229 129 ntBASIC-0.82□□□□□ -2.54
Rpa3Q9CQ71 Gm22966-201ENSMUST00000157957 129 ntBASIC-0.82□□□□□ -2.54
Rpa3Q9CQ71 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.83□□□□□ -2.54
Rpa3Q9CQ71 Gm24006-201ENSMUST00000158462 132 ntBASIC-0.83□□□□□ -2.54
Rpa3Q9CQ71 Gm25974-201ENSMUST00000158701 94 ntBASIC-0.83□□□□□ -2.54
Rpa3Q9CQ71 Gm24737-201ENSMUST00000158861 100 ntBASIC-0.83□□□□□ -2.54
Rpa3Q9CQ71 Gm27521-201ENSMUST00000184022 64 ntBASIC-0.83□□□□□ -2.54
Rpa3Q9CQ71 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC-0.83□□□□□ -2.54
Rpa3Q9CQ71 Gm43927-201ENSMUST00000204599 117 ntBASIC-0.83□□□□□ -2.54
Rpa3Q9CQ71 AC129019.2-201ENSMUST00000222063 202 ntBASIC-0.83□□□□□ -2.54
Rpa3Q9CQ71 Gm23242-201ENSMUST00000083055 107 ntBASIC-0.83□□□□□ -2.54
Rpa3Q9CQ71 Mir181b-2-201ENSMUST00000083644 89 ntBASIC-0.83□□□□□ -2.54
Rpa3Q9CQ71 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-0.83□□□□□ -2.54
Rpa3Q9CQ71 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.84□□□□□ -2.54
Rpa3Q9CQ71 Gm26421-201ENSMUST00000104279 132 ntBASIC-0.84□□□□□ -2.54
Rpa3Q9CQ71 Gm14906-201ENSMUST00000119265 390 ntBASIC-0.84□□□□□ -2.54
Rpa3Q9CQ71 Gm12686-201ENSMUST00000120546 397 ntBASIC-0.84□□□□□ -2.54
Rpa3Q9CQ71 Gm22079-201ENSMUST00000157592 106 ntBASIC-0.84□□□□□ -2.54
Rpa3Q9CQ71 Gm22557-201ENSMUST00000157804 102 ntBASIC-0.84□□□□□ -2.54
Rpa3Q9CQ71 Mir7227-201ENSMUST00000200408 59 ntBASIC-0.84□□□□□ -2.54
Rpa3Q9CQ71 mt-Tc-201ENSMUST00000082400 66 ntBASIC-0.84□□□□□ -2.54
Rpa3Q9CQ71 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC-0.85□□□□□ -2.55
Rpa3Q9CQ71 Gm24223-201ENSMUST00000158827 90 ntBASIC-0.85□□□□□ -2.55
Rpa3Q9CQ71 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.85□□□□□ -2.55
Rpa3Q9CQ71 Gm37404-201ENSMUST00000195726 359 ntBASIC-0.85□□□□□ -2.55
Rpa3Q9CQ71 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.85□□□□□ -2.55
Rpa3Q9CQ71 Gm26202-201ENSMUST00000082910 65 ntBASIC-0.85□□□□□ -2.55
Rpa3Q9CQ71 Gm24468-201ENSMUST00000104489 104 ntBASIC-0.86□□□□□ -2.55
Rpa3Q9CQ71 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.86□□□□□ -2.55
Rpa3Q9CQ71 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC-0.86□□□□□ -2.55
Rpa3Q9CQ71 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC-0.86□□□□□ -2.55
Rpa3Q9CQ71 Gm25797-201ENSMUST00000082640 107 ntBASIC-0.86□□□□□ -2.55
Rpa3Q9CQ71 Gm22571-201ENSMUST00000082984 70 ntBASIC-0.86□□□□□ -2.55
Rpa3Q9CQ71 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.86□□□□□ -2.55
Rpa3Q9CQ71 Gm24640-201ENSMUST00000116949 126 ntBASIC-0.87□□□□□ -2.55
Rpa3Q9CQ71 Gm22626-201ENSMUST00000116990 126 ntBASIC-0.87□□□□□ -2.55
Rpa3Q9CQ71 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.87□□□□□ -2.55
Rpa3Q9CQ71 Gm26290-201ENSMUST00000158891 145 ntBASIC-0.87□□□□□ -2.55
Rpa3Q9CQ71 Gm25160-201ENSMUST00000158914 102 ntBASIC-0.87□□□□□ -2.55
Retrieved 100 of 76,532 protein–RNA pairs in 169.9 ms