Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Mir6369-201ENSMUST00000183772 106 ntBASIC0.23□□□□□ -2.37
Sf3b1Q99NB9 Gm27332-201ENSMUST00000184893 112 ntBASIC0.23□□□□□ -2.37
Sf3b1Q99NB9 Mir6928-201ENSMUST00000185166 70 ntBASIC0.23□□□□□ -2.37
Sf3b1Q99NB9 Gm28767-201ENSMUST00000188601 114 ntBASIC0.23□□□□□ -2.37
Sf3b1Q99NB9 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.23□□□□□ -2.37
Sf3b1Q99NB9 Mir411-201ENSMUST00000083543 82 ntBASIC0.23□□□□□ -2.37
Sf3b1Q99NB9 Gm24132-201ENSMUST00000104745 91 ntBASIC0.22□□□□□ -2.37
Sf3b1Q99NB9 Gm22612-201ENSMUST00000158293 101 ntBASIC0.22□□□□□ -2.37
Sf3b1Q99NB9 Gm22088-201ENSMUST00000158341 117 ntBASIC0.22□□□□□ -2.37
Sf3b1Q99NB9 Gm25834-201ENSMUST00000158916 101 ntBASIC0.22□□□□□ -2.37
Sf3b1Q99NB9 Gm24575-201ENSMUST00000175502 77 ntBASIC0.22□□□□□ -2.37
Sf3b1Q99NB9 Gm8508-201ENSMUST00000061226 363 ntBASIC0.22□□□□□ -2.37
Sf3b1Q99NB9 Mir200a-201ENSMUST00000083466 90 ntBASIC0.22□□□□□ -2.37
Sf3b1Q99NB9 Gm23708-201ENSMUST00000104367 123 ntBASIC0.21□□□□□ -2.38
Sf3b1Q99NB9 Gm22557-201ENSMUST00000157804 102 ntBASIC0.21□□□□□ -2.38
Sf3b1Q99NB9 Gm16550-201ENSMUST00000162550 126 ntBASIC0.21□□□□□ -2.38
Sf3b1Q99NB9 Gm22239-201ENSMUST00000175220 103 ntBASIC0.21□□□□□ -2.38
Sf3b1Q99NB9 Mir100-201ENSMUST00000175270 80 ntBASIC0.21□□□□□ -2.38
Sf3b1Q99NB9 Gm27717-201ENSMUST00000183933 151 ntBASIC0.21□□□□□ -2.38
Sf3b1Q99NB9 Gm37586-201ENSMUST00000193654 204 ntBASIC0.21□□□□□ -2.38
Sf3b1Q99NB9 Mir6375-201ENSMUST00000197176 95 ntBASIC0.21□□□□□ -2.38
Sf3b1Q99NB9 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.21□□□□□ -2.38
Sf3b1Q99NB9 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
Sf3b1Q99NB9 Mir1899-201ENSMUST00000122798 96 ntBASIC0.2□□□□□ -2.38
Sf3b1Q99NB9 Gm27993-201ENSMUST00000184362 85 ntBASIC0.2□□□□□ -2.38
Sf3b1Q99NB9 Gm44807-201ENSMUST00000206115 154 ntBASIC0.2□□□□□ -2.38
Sf3b1Q99NB9 Gm23301-201ENSMUST00000082713 65 ntBASIC0.2□□□□□ -2.38
Sf3b1Q99NB9 Gm24522-201ENSMUST00000083964 108 ntBASIC0.2□□□□□ -2.38
Sf3b1Q99NB9 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.2□□□□□ -2.38
Sf3b1Q99NB9 Mir466b-8-201ENSMUST00000103883 86 ntBASIC0.19□□□□□ -2.38
Sf3b1Q99NB9 Gm23531-201ENSMUST00000104567 68 ntBASIC0.19□□□□□ -2.38
Sf3b1Q99NB9 Gm26156-201ENSMUST00000116999 123 ntBASIC0.19□□□□□ -2.38
Sf3b1Q99NB9 Gm15654-201ENSMUST00000152660 300 ntBASIC0.19□□□□□ -2.38
Sf3b1Q99NB9 Gm23258-201ENSMUST00000158319 106 ntBASIC0.19□□□□□ -2.38
Sf3b1Q99NB9 Scarna8-201ENSMUST00000158333 131 ntBASIC0.19□□□□□ -2.38
Sf3b1Q99NB9 Gm22476-201ENSMUST00000158902 100 ntBASIC0.19□□□□□ -2.38
Sf3b1Q99NB9 Mir6365-201ENSMUST00000183990 101 ntBASIC0.19□□□□□ -2.38
Sf3b1Q99NB9 Gm37330-201ENSMUST00000192606 153 ntBASIC0.19□□□□□ -2.38
Sf3b1Q99NB9 Gm37116-201ENSMUST00000195161 147 ntBASIC0.19□□□□□ -2.38
Sf3b1Q99NB9 Gm44457-201ENSMUST00000198109 76 ntBASIC0.19□□□□□ -2.38
Sf3b1Q99NB9 Mir466e-201ENSMUST00000198862 84 ntBASIC0.19□□□□□ -2.38
Sf3b1Q99NB9 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.19□□□□□ -2.38
Sf3b1Q99NB9 Gm44455-201ENSMUST00000200061 82 ntBASIC0.19□□□□□ -2.38
Sf3b1Q99NB9 Mir466c-1-201ENSMUST00000200654 84 ntBASIC0.19□□□□□ -2.38
Sf3b1Q99NB9 Gm5002-201ENSMUST00000207145 223 ntBASIC0.19□□□□□ -2.38
Sf3b1Q99NB9 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.19□□□□□ -2.38
Sf3b1Q99NB9 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
Sf3b1Q99NB9 Gm25482-201ENSMUST00000083225 107 ntBASIC0.19□□□□□ -2.38
Sf3b1Q99NB9 Gm23881-201ENSMUST00000116872 66 ntBASIC0.18□□□□□ -2.38
Sf3b1Q99NB9 Gm23901-201ENSMUST00000157570 107 ntBASIC0.18□□□□□ -2.38
Sf3b1Q99NB9 Gm24288-201ENSMUST00000157630 144 ntBASIC0.18□□□□□ -2.38
Sf3b1Q99NB9 Mir30f-201ENSMUST00000196073 92 ntBASIC0.18□□□□□ -2.38
Sf3b1Q99NB9 Mir721-201ENSMUST00000200230 88 ntBASIC0.18□□□□□ -2.38
Sf3b1Q99NB9 Mir201-201ENSMUST00000083470 66 ntBASIC0.18□□□□□ -2.38
Sf3b1Q99NB9 Gm22148-201ENSMUST00000104445 107 ntBASIC0.17□□□□□ -2.38
Sf3b1Q99NB9 Gm24833-201ENSMUST00000116775 120 ntBASIC0.17□□□□□ -2.38
Sf3b1Q99NB9 Gm23180-201ENSMUST00000158686 125 ntBASIC0.17□□□□□ -2.38
Sf3b1Q99NB9 Gm28724-201ENSMUST00000186149 625 ntBASIC0.17□□□□□ -2.38
Sf3b1Q99NB9 Mir7229-201ENSMUST00000197062 53 ntBASIC0.17□□□□□ -2.38
Sf3b1Q99NB9 Mir3969-201ENSMUST00000197106 92 ntBASIC0.17□□□□□ -2.38
Sf3b1Q99NB9 Gm45002-201ENSMUST00000208045 120 ntBASIC0.17□□□□□ -2.38
Sf3b1Q99NB9 Gm10172-201ENSMUST00000085929 558 ntBASIC0.17□□□□□ -2.38
Sf3b1Q99NB9 Mir489-201ENSMUST00000093599 107 ntBASIC0.17□□□□□ -2.38
Sf3b1Q99NB9 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.16□□□□□ -2.38
Sf3b1Q99NB9 Gm25985-201ENSMUST00000122677 107 ntBASIC0.16□□□□□ -2.38
Sf3b1Q99NB9 Gm23080-201ENSMUST00000157846 103 ntBASIC0.16□□□□□ -2.38
Sf3b1Q99NB9 Gm22520-201ENSMUST00000158269 129 ntBASIC0.16□□□□□ -2.38
Sf3b1Q99NB9 Gm23859-201ENSMUST00000158383 64 ntBASIC0.16□□□□□ -2.38
Sf3b1Q99NB9 Gm26158-201ENSMUST00000158973 119 ntBASIC0.16□□□□□ -2.38
Sf3b1Q99NB9 Mir6342-201ENSMUST00000183870 125 ntBASIC0.16□□□□□ -2.38
Sf3b1Q99NB9 Mir1a-2-201ENSMUST00000198520 72 ntBASIC0.16□□□□□ -2.38
Sf3b1Q99NB9 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.16□□□□□ -2.38
Sf3b1Q99NB9 Gm25894-201ENSMUST00000083458 75 ntBASIC0.16□□□□□ -2.38
Sf3b1Q99NB9 Mir302d-201ENSMUST00000083513 66 ntBASIC0.16□□□□□ -2.38
Sf3b1Q99NB9 Gm25610-201ENSMUST00000104016 129 ntBASIC0.15□□□□□ -2.38
Sf3b1Q99NB9 Gm24640-201ENSMUST00000116949 126 ntBASIC0.15□□□□□ -2.38
Sf3b1Q99NB9 Gm22626-201ENSMUST00000116990 126 ntBASIC0.15□□□□□ -2.38
Sf3b1Q99NB9 Gm14626-201ENSMUST00000117619 216 ntBASIC0.15□□□□□ -2.38
Sf3b1Q99NB9 Gm16186-201ENSMUST00000120132 216 ntBASIC0.15□□□□□ -2.38
Sf3b1Q99NB9 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.15□□□□□ -2.38
Sf3b1Q99NB9 Gm23857-201ENSMUST00000158379 111 ntBASIC0.15□□□□□ -2.38
Sf3b1Q99NB9 Gm23917-201ENSMUST00000175256 98 ntBASIC0.15□□□□□ -2.38
Sf3b1Q99NB9 Gm22258-201ENSMUST00000177645 94 ntBASIC0.15□□□□□ -2.38
Sf3b1Q99NB9 Gm26032-201ENSMUST00000178535 94 ntBASIC0.15□□□□□ -2.38
Sf3b1Q99NB9 Gm25210-201ENSMUST00000178813 94 ntBASIC0.15□□□□□ -2.38
Sf3b1Q99NB9 Gm25157-201ENSMUST00000178914 94 ntBASIC0.15□□□□□ -2.38
Sf3b1Q99NB9 Gm22046-201ENSMUST00000179027 94 ntBASIC0.15□□□□□ -2.38
Sf3b1Q99NB9 Gm24761-201ENSMUST00000179589 127 ntBASIC0.15□□□□□ -2.38
Sf3b1Q99NB9 Gm22941-201ENSMUST00000179630 94 ntBASIC0.15□□□□□ -2.38
Sf3b1Q99NB9 Gm25471-201ENSMUST00000180126 94 ntBASIC0.15□□□□□ -2.38
Sf3b1Q99NB9 Gm27285-201ENSMUST00000183875 127 ntBASIC0.15□□□□□ -2.38
Sf3b1Q99NB9 Mir7657-201ENSMUST00000196051 57 ntBASIC0.15□□□□□ -2.38
Sf3b1Q99NB9 Mir488-201ENSMUST00000093595 109 ntBASIC0.15□□□□□ -2.38
Sf3b1Q99NB9 Gm14502-201ENSMUST00000118154 113 ntBASIC0.14□□□□□ -2.39
Sf3b1Q99NB9 Gm23994-201ENSMUST00000158059 88 ntBASIC0.14□□□□□ -2.39
Sf3b1Q99NB9 Gm10548-202ENSMUST00000165672 272 ntBASIC0.14□□□□□ -2.39
Sf3b1Q99NB9 Mir3108-201ENSMUST00000175500 79 ntBASIC0.14□□□□□ -2.39
Sf3b1Q99NB9 Gm27943-201ENSMUST00000184844 116 ntBASIC0.14□□□□□ -2.39
Sf3b1Q99NB9 Gm27607-201ENSMUST00000185162 122 ntBASIC0.14□□□□□ -2.39
Sf3b1Q99NB9 Snord60-201ENSMUST00000082834 78 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 178.2 ms