Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Gm25113-201ENSMUST00000157185 143 ntBASIC2.56□□□□□ -2
Usp3Q91W36 Gm26358-201ENSMUST00000158215 97 ntBASIC2.56□□□□□ -2
Usp3Q91W36 Mir3061-201ENSMUST00000175129 91 ntBASIC2.56□□□□□ -2
Usp3Q91W36 Gm3852-201ENSMUST00000182781 264 ntBASIC2.56□□□□□ -2
Usp3Q91W36 Mir6917-201ENSMUST00000184111 61 ntBASIC2.56□□□□□ -2
Usp3Q91W36 Gm44966-201ENSMUST00000208096 157 ntBASIC2.56□□□□□ -2
Usp3Q91W36 Gm24162-201ENSMUST00000093665 102 ntBASIC2.56□□□□□ -2
Usp3Q91W36 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
Usp3Q91W36 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Usp3Q91W36 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC2.56□□□□□ -2
Usp3Q91W36 Gm25417-201ENSMUST00000104212 131 ntBASIC2.55□□□□□ -2
Usp3Q91W36 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC2.55□□□□□ -2
Usp3Q91W36 Gm24183-201ENSMUST00000122572 93 ntBASIC2.55□□□□□ -2
Usp3Q91W36 Gm24212-201ENSMUST00000158258 132 ntBASIC2.55□□□□□ -2
Usp3Q91W36 Gm22500-201ENSMUST00000158982 99 ntBASIC2.55□□□□□ -2
Usp3Q91W36 Gm22914-201ENSMUST00000175195 77 ntBASIC2.55□□□□□ -2
Usp3Q91W36 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.55□□□□□ -2
Usp3Q91W36 mt-Tl2-201ENSMUST00000082417 71 ntBASIC2.55□□□□□ -2
Usp3Q91W36 Gm22866-201ENSMUST00000083947 177 ntBASIC2.55□□□□□ -2
Usp3Q91W36 Mir542-201ENSMUST00000102186 85 ntBASIC2.54□□□□□ -2
Usp3Q91W36 Gm26473-201ENSMUST00000116763 127 ntBASIC2.54□□□□□ -2
Usp3Q91W36 Gm25945-201ENSMUST00000122484 135 ntBASIC2.54□□□□□ -2
Usp3Q91W36 Gm24064-201ENSMUST00000157486 106 ntBASIC2.54□□□□□ -2
Usp3Q91W36 Gm24199-201ENSMUST00000157808 136 ntBASIC2.54□□□□□ -2
Usp3Q91W36 Snord87-201ENSMUST00000175437 87 ntBASIC2.54□□□□□ -2
Usp3Q91W36 Gm8031-201ENSMUST00000213430 626 ntBASIC2.54□□□□□ -2
Usp3Q91W36 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Usp3Q91W36 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
Usp3Q91W36 Gm22752-201ENSMUST00000102083 109 ntBASIC2.53□□□□□ -2
Usp3Q91W36 Snora36b-201ENSMUST00000104383 132 ntBASIC2.53□□□□□ -2
Usp3Q91W36 Gm22403-201ENSMUST00000174919 84 ntBASIC2.53□□□□□ -2
Usp3Q91W36 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Usp3Q91W36 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
Usp3Q91W36 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Usp3Q91W36 Mir1197-201ENSMUST00000117037 120 ntBASIC2.52□□□□□ -2.01
Usp3Q91W36 Gm22416-201ENSMUST00000158590 88 ntBASIC2.52□□□□□ -2.01
Usp3Q91W36 Gm25119-201ENSMUST00000158815 88 ntBASIC2.52□□□□□ -2.01
Usp3Q91W36 Gm22095-201ENSMUST00000158984 150 ntBASIC2.52□□□□□ -2.01
Usp3Q91W36 Gm16561-201ENSMUST00000163001 192 ntBASIC2.52□□□□□ -2.01
Usp3Q91W36 Gm22887-201ENSMUST00000178586 107 ntBASIC2.52□□□□□ -2.01
Usp3Q91W36 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
Usp3Q91W36 Gm23889-201ENSMUST00000122689 104 ntBASIC2.51□□□□□ -2.01
Usp3Q91W36 Gm24075-201ENSMUST00000158175 72 ntBASIC2.51□□□□□ -2.01
Usp3Q91W36 Gm24210-201ENSMUST00000158263 133 ntBASIC2.51□□□□□ -2.01
Usp3Q91W36 Gm43626-201ENSMUST00000198575 162 ntBASIC2.51□□□□□ -2.01
Usp3Q91W36 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Usp3Q91W36 Gm24988-201ENSMUST00000104460 121 ntBASIC2.5□□□□□ -2.01
Usp3Q91W36 Gm24868-201ENSMUST00000157265 136 ntBASIC2.5□□□□□ -2.01
Usp3Q91W36 Gm24900-201ENSMUST00000158128 134 ntBASIC2.5□□□□□ -2.01
Usp3Q91W36 Gm24077-201ENSMUST00000158183 136 ntBASIC2.5□□□□□ -2.01
Usp3Q91W36 Mir7062-201ENSMUST00000185038 66 ntBASIC2.5□□□□□ -2.01
Usp3Q91W36 Gm44555-201ENSMUST00000209008 148 ntBASIC2.5□□□□□ -2.01
Usp3Q91W36 Mir127-201ENSMUST00000093568 70 ntBASIC2.5□□□□□ -2.01
Usp3Q91W36 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
Usp3Q91W36 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Usp3Q91W36 Gm25866-201ENSMUST00000158245 112 ntBASIC2.49□□□□□ -2.01
Usp3Q91W36 Mir3057-201ENSMUST00000175040 91 ntBASIC2.49□□□□□ -2.01
Usp3Q91W36 Gm27517-201ENSMUST00000184347 236 ntBASIC2.49□□□□□ -2.01
Usp3Q91W36 Gm45197-201ENSMUST00000205288 151 ntBASIC2.49□□□□□ -2.01
Usp3Q91W36 Snord7-201ENSMUST00000083781 97 ntBASIC2.49□□□□□ -2.01
Usp3Q91W36 Gm11694-201ENSMUST00000118637 159 ntBASIC2.48□□□□□ -2.01
Usp3Q91W36 Mir3075-201ENSMUST00000175340 85 ntBASIC2.48□□□□□ -2.01
Usp3Q91W36 AC157602.1-201ENSMUST00000197446 105 ntBASIC2.48□□□□□ -2.01
Usp3Q91W36 Gm25636-201ENSMUST00000082666 133 ntBASIC2.48□□□□□ -2.01
Usp3Q91W36 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Usp3Q91W36 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
Usp3Q91W36 Gm24907-201ENSMUST00000116932 128 ntBASIC2.47□□□□□ -2.01
Usp3Q91W36 Gm23980-201ENSMUST00000157135 158 ntBASIC2.47□□□□□ -2.01
Usp3Q91W36 Gm25354-201ENSMUST00000179110 105 ntBASIC2.47□□□□□ -2.01
Usp3Q91W36 Snord60-201ENSMUST00000082834 78 ntBASIC2.47□□□□□ -2.01
Usp3Q91W36 Gm23419-201ENSMUST00000175523 84 ntBASIC2.46□□□□□ -2.02
Usp3Q91W36 Gm25730-201ENSMUST00000178753 165 ntBASIC2.46□□□□□ -2.02
Usp3Q91W36 Gm23570-201ENSMUST00000083029 104 ntBASIC2.46□□□□□ -2.02
Usp3Q91W36 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Usp3Q91W36 Mir1899-201ENSMUST00000122798 96 ntBASIC2.45□□□□□ -2.02
Usp3Q91W36 Gm22944-201ENSMUST00000158662 133 ntBASIC2.45□□□□□ -2.02
Usp3Q91W36 Mir3092-201ENSMUST00000174954 96 ntBASIC2.45□□□□□ -2.02
Usp3Q91W36 Gm5900-201ENSMUST00000179862 375 ntBASIC2.45□□□□□ -2.02
Usp3Q91W36 Gm28435-201ENSMUST00000185496 108 ntBASIC2.45□□□□□ -2.02
Usp3Q91W36 Gm29047-201ENSMUST00000189816 108 ntBASIC2.45□□□□□ -2.02
Usp3Q91W36 Mir6925-201ENSMUST00000197857 70 ntBASIC2.45□□□□□ -2.02
Usp3Q91W36 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC2.45□□□□□ -2.02
Usp3Q91W36 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Usp3Q91W36 Gm25529-201ENSMUST00000104850 92 ntBASIC2.44□□□□□ -2.02
Usp3Q91W36 Gm25847-201ENSMUST00000116793 96 ntBASIC2.44□□□□□ -2.02
Usp3Q91W36 Gm22486-201ENSMUST00000116815 137 ntBASIC2.44□□□□□ -2.02
Usp3Q91W36 Gm22082-201ENSMUST00000157587 161 ntBASIC2.44□□□□□ -2.02
Usp3Q91W36 Gm24728-201ENSMUST00000158226 125 ntBASIC2.44□□□□□ -2.02
Usp3Q91W36 Mir7241-201ENSMUST00000184532 64 ntBASIC2.44□□□□□ -2.02
Usp3Q91W36 Gm27369-201ENSMUST00000185182 71 ntBASIC2.44□□□□□ -2.02
Usp3Q91W36 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.44□□□□□ -2.02
Usp3Q91W36 Gm23376-201ENSMUST00000082938 160 ntBASIC2.44□□□□□ -2.02
Usp3Q91W36 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Usp3Q91W36 Gm27722-201ENSMUST00000183908 76 ntBASIC2.43□□□□□ -2.02
Usp3Q91W36 Gm24475-201ENSMUST00000157435 143 ntBASIC2.42□□□□□ -2.02
Usp3Q91W36 Gm25870-201ENSMUST00000179845 79 ntBASIC2.42□□□□□ -2.02
Usp3Q91W36 Gm28862-201ENSMUST00000188246 163 ntBASIC2.42□□□□□ -2.02
Usp3Q91W36 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Usp3Q91W36 Gm23482-201ENSMUST00000104172 122 ntBASIC2.41□□□□□ -2.02
Usp3Q91W36 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.41□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 172.3 ms