Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm28489-201ENSMUST00000186655 316 ntBASIC-0.96□□□□□ -2.56
Lsm1Q8VC85 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.96□□□□□ -2.56
Lsm1Q8VC85 Mir363-201ENSMUST00000093598 75 ntBASIC-0.96□□□□□ -2.56
Lsm1Q8VC85 Gm22332-201ENSMUST00000158072 126 ntBASIC-0.97□□□□□ -2.56
Lsm1Q8VC85 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC-0.97□□□□□ -2.56
Lsm1Q8VC85 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC-0.97□□□□□ -2.56
Lsm1Q8VC85 Gm25664-201ENSMUST00000157697 107 ntBASIC-0.98□□□□□ -2.57
Lsm1Q8VC85 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC-0.98□□□□□ -2.57
Lsm1Q8VC85 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC-0.98□□□□□ -2.57
Lsm1Q8VC85 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC-0.98□□□□□ -2.57
Lsm1Q8VC85 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC-0.98□□□□□ -2.57
Lsm1Q8VC85 Gm18665-201ENSMUST00000189783 270 ntBASIC-0.98□□□□□ -2.57
Lsm1Q8VC85 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC-0.98□□□□□ -2.57
Lsm1Q8VC85 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC-0.98□□□□□ -2.57
Lsm1Q8VC85 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC-0.98□□□□□ -2.57
Lsm1Q8VC85 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC-0.98□□□□□ -2.57
Lsm1Q8VC85 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC-0.98□□□□□ -2.57
Lsm1Q8VC85 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC-0.98□□□□□ -2.57
Lsm1Q8VC85 Gm45005-201ENSMUST00000206640 157 ntBASIC-0.98□□□□□ -2.57
Lsm1Q8VC85 Gm26207-201ENSMUST00000082909 104 ntBASIC-0.98□□□□□ -2.57
Lsm1Q8VC85 Gm22784-201ENSMUST00000104088 132 ntBASIC-0.99□□□□□ -2.57
Lsm1Q8VC85 Mir7657-201ENSMUST00000196051 57 ntBASIC-0.99□□□□□ -2.57
Lsm1Q8VC85 AC129019.2-201ENSMUST00000222063 202 ntBASIC-0.99□□□□□ -2.57
Lsm1Q8VC85 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.99□□□□□ -2.57
Lsm1Q8VC85 Gm26420-201ENSMUST00000104273 103 ntBASIC-1□□□□□ -2.57
Lsm1Q8VC85 Gm24392-201ENSMUST00000158136 103 ntBASIC-1□□□□□ -2.57
Lsm1Q8VC85 Gm24667-201ENSMUST00000158938 103 ntBASIC-1□□□□□ -2.57
Lsm1Q8VC85 Gm23567-201ENSMUST00000178005 107 ntBASIC-1□□□□□ -2.57
Lsm1Q8VC85 Mir7651-201ENSMUST00000184154 64 ntBASIC-1□□□□□ -2.57
Lsm1Q8VC85 Mir218-1-201ENSMUST00000083669 110 ntBASIC-1□□□□□ -2.57
Lsm1Q8VC85 Gm14906-201ENSMUST00000119265 390 ntBASIC-1.01□□□□□ -2.57
Lsm1Q8VC85 Gm25935-201ENSMUST00000178746 107 ntBASIC-1.01□□□□□ -2.57
Lsm1Q8VC85 Gm27735-201ENSMUST00000185085 76 ntBASIC-1.01□□□□□ -2.57
Lsm1Q8VC85 AC164117.2-201ENSMUST00000222090 327 ntBASIC-1.01□□□□□ -2.57
Lsm1Q8VC85 AC167192.1-201ENSMUST00000225908 139 ntBASIC-1.01□□□□□ -2.57
Lsm1Q8VC85 Gm26497-201ENSMUST00000083146 107 ntBASIC-1.01□□□□□ -2.57
Lsm1Q8VC85 Gm24468-201ENSMUST00000104489 104 ntBASIC-1.02□□□□□ -2.57
Lsm1Q8VC85 Gm27884-201ENSMUST00000183865 76 ntBASIC-1.02□□□□□ -2.57
Lsm1Q8VC85 Gm26255-201ENSMUST00000122492 103 ntBASIC-1.03□□□□□ -2.57
Lsm1Q8VC85 Gm26287-201ENSMUST00000158887 81 ntBASIC-1.03□□□□□ -2.57
Lsm1Q8VC85 Gm43927-201ENSMUST00000204599 117 ntBASIC-1.03□□□□□ -2.57
Lsm1Q8VC85 AC154296.2-201ENSMUST00000214696 545 ntBASIC-1.03□□□□□ -2.57
Lsm1Q8VC85 Gm24929-201ENSMUST00000083403 139 ntBASIC-1.03□□□□□ -2.57
Lsm1Q8VC85 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-1.03□□□□□ -2.57
Lsm1Q8VC85 Gm23197-201ENSMUST00000158809 112 ntBASIC-1.04□□□□□ -2.58
Lsm1Q8VC85 Gm24223-201ENSMUST00000158827 90 ntBASIC-1.04□□□□□ -2.58
Lsm1Q8VC85 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-1.04□□□□□ -2.58
Lsm1Q8VC85 Mir5624-201ENSMUST00000176635 61 ntBASIC-1.04□□□□□ -2.58
Lsm1Q8VC85 Mir6928-201ENSMUST00000185166 70 ntBASIC-1.04□□□□□ -2.58
Lsm1Q8VC85 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC-1.04□□□□□ -2.58
Lsm1Q8VC85 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC-1.04□□□□□ -2.58
Lsm1Q8VC85 Gm45688-201ENSMUST00000210002 101 ntBASIC-1.04□□□□□ -2.58
Lsm1Q8VC85 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-1.04□□□□□ -2.58
Lsm1Q8VC85 Gm25588-201ENSMUST00000082501 140 ntBASIC-1.04□□□□□ -2.58
Lsm1Q8VC85 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC-1.05□□□□□ -2.58
Lsm1Q8VC85 Gm24238-201ENSMUST00000157792 98 ntBASIC-1.05□□□□□ -2.58
Lsm1Q8VC85 Gm25974-201ENSMUST00000158701 94 ntBASIC-1.05□□□□□ -2.58
Lsm1Q8VC85 AC125190.3-201ENSMUST00000223224 121 ntBASIC-1.05□□□□□ -2.58
Lsm1Q8VC85 mt-Tc-201ENSMUST00000082400 66 ntBASIC-1.05□□□□□ -2.58
Lsm1Q8VC85 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-1.05□□□□□ -2.58
Lsm1Q8VC85 Gm24498-201ENSMUST00000158445 102 ntBASIC-1.06□□□□□ -2.58
Lsm1Q8VC85 Gm37313-201ENSMUST00000191673 290 ntBASIC-1.06□□□□□ -2.58
Lsm1Q8VC85 Gm23219-201ENSMUST00000158123 87 ntBASIC-1.07□□□□□ -2.58
Lsm1Q8VC85 Gm25160-201ENSMUST00000158914 102 ntBASIC-1.07□□□□□ -2.58
Lsm1Q8VC85 Gm26160-201ENSMUST00000158965 63 ntBASIC-1.07□□□□□ -2.58
Lsm1Q8VC85 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC-1.07□□□□□ -2.58
Lsm1Q8VC85 AC153526.1-201ENSMUST00000219750 190 ntBASIC-1.07□□□□□ -2.58
Lsm1Q8VC85 AC108945.1-201ENSMUST00000226477 94 ntBASIC-1.07□□□□□ -2.58
Lsm1Q8VC85 Gm25797-201ENSMUST00000082640 107 ntBASIC-1.07□□□□□ -2.58
Lsm1Q8VC85 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC-1.08□□□□□ -2.58
Lsm1Q8VC85 Gm22079-201ENSMUST00000157592 106 ntBASIC-1.08□□□□□ -2.58
Lsm1Q8VC85 Gm24073-201ENSMUST00000158177 106 ntBASIC-1.08□□□□□ -2.58
Lsm1Q8VC85 Gm26290-201ENSMUST00000158891 145 ntBASIC-1.08□□□□□ -2.58
Lsm1Q8VC85 Gm29140-201ENSMUST00000190187 476 ntBASIC-1.08□□□□□ -2.58
Lsm1Q8VC85 AC154552.1-201ENSMUST00000222969 202 ntBASIC-1.08□□□□□ -2.58
Lsm1Q8VC85 Gm23941-201ENSMUST00000101953 107 ntBASIC-1.09□□□□□ -2.58
Lsm1Q8VC85 Gm11204-201ENSMUST00000122438 147 ntBASIC-1.09□□□□□ -2.58
Lsm1Q8VC85 Gm25267-201ENSMUST00000158522 63 ntBASIC-1.09□□□□□ -2.58
Lsm1Q8VC85 Mir3101-201ENSMUST00000175607 88 ntBASIC-1.09□□□□□ -2.58
Lsm1Q8VC85 Gm27317-201ENSMUST00000183533 95 ntBASIC-1.09□□□□□ -2.58
Lsm1Q8VC85 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC-1.09□□□□□ -2.58
Lsm1Q8VC85 Gm24640-201ENSMUST00000116949 126 ntBASIC-1.1□□□□□ -2.59
Lsm1Q8VC85 Gm22626-201ENSMUST00000116990 126 ntBASIC-1.1□□□□□ -2.59
Lsm1Q8VC85 Gm25235-201ENSMUST00000179933 107 ntBASIC-1.1□□□□□ -2.59
Lsm1Q8VC85 Gm22364-201ENSMUST00000083097 98 ntBASIC-1.1□□□□□ -2.59
Lsm1Q8VC85 Gm22790-201ENSMUST00000157229 129 ntBASIC-1.11□□□□□ -2.59
Lsm1Q8VC85 Gm25249-201ENSMUST00000175471 78 ntBASIC-1.11□□□□□ -2.59
Lsm1Q8VC85 Mir3969-201ENSMUST00000197106 92 ntBASIC-1.11□□□□□ -2.59
Lsm1Q8VC85 Gm44338-201ENSMUST00000198614 110 ntBASIC-1.11□□□□□ -2.59
Lsm1Q8VC85 Snora62-201ENSMUST00000082991 149 ntBASIC-1.11□□□□□ -2.59
Lsm1Q8VC85 Gm24423-201ENSMUST00000101982 106 ntBASIC-1.12□□□□□ -2.59
Lsm1Q8VC85 Gm12686-201ENSMUST00000120546 397 ntBASIC-1.12□□□□□ -2.59
Lsm1Q8VC85 Gm12748-201ENSMUST00000120763 504 ntBASIC-1.12□□□□□ -2.59
Lsm1Q8VC85 Gm22337-201ENSMUST00000157721 132 ntBASIC-1.12□□□□□ -2.59
Lsm1Q8VC85 Gm24006-201ENSMUST00000158462 132 ntBASIC-1.12□□□□□ -2.59
Lsm1Q8VC85 Gm28927-201ENSMUST00000191528 272 ntBASIC-1.12□□□□□ -2.59
Lsm1Q8VC85 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-1.13□□□□□ -2.59
Lsm1Q8VC85 Gm25329-201ENSMUST00000158041 126 ntBASIC-1.13□□□□□ -2.59
Lsm1Q8VC85 Gm28008-201ENSMUST00000184021 186 ntBASIC-1.13□□□□□ -2.59
Lsm1Q8VC85 Mir378c-201ENSMUST00000184478 99 ntBASIC-1.13□□□□□ -2.59
Retrieved 100 of 76,532 protein–RNA pairs in 138.4 ms