Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm22556-201ENSMUST00000157803 100 ntBASIC1.83□□□□□ -2.12
Ccdc9Q8VC31 Gm23090-201ENSMUST00000177331 78 ntBASIC1.83□□□□□ -2.12
Ccdc9Q8VC31 Mir6377-201ENSMUST00000183760 114 ntBASIC1.83□□□□□ -2.12
Ccdc9Q8VC31 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.83□□□□□ -2.12
Ccdc9Q8VC31 Gm26922-201ENSMUST00000082687 72 ntBASIC1.83□□□□□ -2.12
Ccdc9Q8VC31 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.82□□□□□ -2.12
Ccdc9Q8VC31 Gm23170-201ENSMUST00000157158 106 ntBASIC1.82□□□□□ -2.12
Ccdc9Q8VC31 Gm22279-201ENSMUST00000157200 93 ntBASIC1.82□□□□□ -2.12
Ccdc9Q8VC31 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.82□□□□□ -2.12
Ccdc9Q8VC31 Gm27898-201ENSMUST00000183987 80 ntBASIC1.82□□□□□ -2.12
Ccdc9Q8VC31 Mir7225-201ENSMUST00000184178 54 ntBASIC1.82□□□□□ -2.12
Ccdc9Q8VC31 Mir6352-201ENSMUST00000184495 116 ntBASIC1.82□□□□□ -2.12
Ccdc9Q8VC31 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Ccdc9Q8VC31 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC1.82□□□□□ -2.12
Ccdc9Q8VC31 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.82□□□□□ -2.12
Ccdc9Q8VC31 Snora41-201ENSMUST00000082668 132 ntBASIC1.82□□□□□ -2.12
Ccdc9Q8VC31 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Ccdc9Q8VC31 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Ccdc9Q8VC31 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.81□□□□□ -2.12
Ccdc9Q8VC31 Mir293-201ENSMUST00000104841 80 ntBASIC1.81□□□□□ -2.12
Ccdc9Q8VC31 Gm22067-201ENSMUST00000122790 107 ntBASIC1.81□□□□□ -2.12
Ccdc9Q8VC31 Gm24649-201ENSMUST00000157106 134 ntBASIC1.81□□□□□ -2.12
Ccdc9Q8VC31 Gm22731-201ENSMUST00000158086 94 ntBASIC1.81□□□□□ -2.12
Ccdc9Q8VC31 Gm24394-201ENSMUST00000158141 123 ntBASIC1.81□□□□□ -2.12
Ccdc9Q8VC31 Gm22387-201ENSMUST00000158191 131 ntBASIC1.81□□□□□ -2.12
Ccdc9Q8VC31 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Ccdc9Q8VC31 Gm43977-201ENSMUST00000203970 189 ntBASIC1.81□□□□□ -2.12
Ccdc9Q8VC31 AC166341.8-201ENSMUST00000221267 108 ntBASIC1.81□□□□□ -2.12
Ccdc9Q8VC31 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.8□□□□□ -2.12
Ccdc9Q8VC31 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.8□□□□□ -2.12
Ccdc9Q8VC31 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.8□□□□□ -2.12
Ccdc9Q8VC31 Gm23261-201ENSMUST00000158316 136 ntBASIC1.8□□□□□ -2.12
Ccdc9Q8VC31 Gm24229-201ENSMUST00000158830 118 ntBASIC1.8□□□□□ -2.12
Ccdc9Q8VC31 Mir3057-201ENSMUST00000175040 91 ntBASIC1.8□□□□□ -2.12
Ccdc9Q8VC31 Gm27365-201ENSMUST00000184041 177 ntBASIC1.8□□□□□ -2.12
Ccdc9Q8VC31 Gm24203-201ENSMUST00000082949 114 ntBASIC1.8□□□□□ -2.12
Ccdc9Q8VC31 Gm11857-201ENSMUST00000119817 324 ntBASIC1.79□□□□□ -2.12
Ccdc9Q8VC31 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.79□□□□□ -2.12
Ccdc9Q8VC31 Gm24946-201ENSMUST00000158332 106 ntBASIC1.79□□□□□ -2.12
Ccdc9Q8VC31 Gm25976-201ENSMUST00000158695 130 ntBASIC1.79□□□□□ -2.12
Ccdc9Q8VC31 Gm20409-201ENSMUST00000173457 130 ntBASIC1.79□□□□□ -2.12
Ccdc9Q8VC31 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.79□□□□□ -2.12
Ccdc9Q8VC31 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.79□□□□□ -2.12
Ccdc9Q8VC31 Gm25697-201ENSMUST00000082902 98 ntBASIC1.79□□□□□ -2.12
Ccdc9Q8VC31 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.79□□□□□ -2.12
Ccdc9Q8VC31 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.78□□□□□ -2.12
Ccdc9Q8VC31 Mir301b-201ENSMUST00000102333 97 ntBASIC1.78□□□□□ -2.12
Ccdc9Q8VC31 Gm25759-201ENSMUST00000103988 129 ntBASIC1.78□□□□□ -2.12
Ccdc9Q8VC31 Gm23986-201ENSMUST00000157144 63 ntBASIC1.78□□□□□ -2.12
Ccdc9Q8VC31 Gm26150-201ENSMUST00000157426 151 ntBASIC1.78□□□□□ -2.12
Ccdc9Q8VC31 Mir7679-201ENSMUST00000183379 63 ntBASIC1.78□□□□□ -2.12
Ccdc9Q8VC31 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Ccdc9Q8VC31 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Ccdc9Q8VC31 Gm23601-201ENSMUST00000157259 131 ntBASIC1.77□□□□□ -2.13
Ccdc9Q8VC31 Gm23898-201ENSMUST00000158111 103 ntBASIC1.77□□□□□ -2.13
Ccdc9Q8VC31 Gm23351-201ENSMUST00000158427 125 ntBASIC1.77□□□□□ -2.13
Ccdc9Q8VC31 Mir1931-201ENSMUST00000158589 119 ntBASIC1.77□□□□□ -2.13
Ccdc9Q8VC31 Gm22283-201ENSMUST00000082556 161 ntBASIC1.77□□□□□ -2.13
Ccdc9Q8VC31 Gm24536-201ENSMUST00000083144 107 ntBASIC1.77□□□□□ -2.13
Ccdc9Q8VC31 Gm23245-201ENSMUST00000083370 135 ntBASIC1.77□□□□□ -2.13
Ccdc9Q8VC31 Gm24261-201ENSMUST00000083744 104 ntBASIC1.77□□□□□ -2.13
Ccdc9Q8VC31 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.77□□□□□ -2.13
Ccdc9Q8VC31 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.76□□□□□ -2.13
Ccdc9Q8VC31 Traj61-201ENSMUST00000165025 72 ntBASIC1.76□□□□□ -2.13
Ccdc9Q8VC31 Gm23267-201ENSMUST00000178490 132 ntBASIC1.76□□□□□ -2.13
Ccdc9Q8VC31 AC132833.2-201ENSMUST00000228699 157 ntBASIC1.76□□□□□ -2.13
Ccdc9Q8VC31 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.76□□□□□ -2.13
Ccdc9Q8VC31 Gm24038-201ENSMUST00000082872 159 ntBASIC1.76□□□□□ -2.13
Ccdc9Q8VC31 Snord118-201ENSMUST00000082965 135 ntBASIC1.76□□□□□ -2.13
Ccdc9Q8VC31 Gm26109-201ENSMUST00000083970 70 ntBASIC1.76□□□□□ -2.13
Ccdc9Q8VC31 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
Ccdc9Q8VC31 Gm26339-201ENSMUST00000102368 99 ntBASIC1.75□□□□□ -2.13
Ccdc9Q8VC31 Gm22663-201ENSMUST00000158721 102 ntBASIC1.75□□□□□ -2.13
Ccdc9Q8VC31 Gm24638-201ENSMUST00000179807 132 ntBASIC1.75□□□□□ -2.13
Ccdc9Q8VC31 Gm44325-201ENSMUST00000196757 77 ntBASIC1.75□□□□□ -2.13
Ccdc9Q8VC31 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Ccdc9Q8VC31 Gm44490-201ENSMUST00000198566 127 ntBASIC1.75□□□□□ -2.13
Ccdc9Q8VC31 Gm45544-201ENSMUST00000211130 88 ntBASIC1.75□□□□□ -2.13
Ccdc9Q8VC31 Mir34c-201ENSMUST00000083653 77 ntBASIC1.75□□□□□ -2.13
Ccdc9Q8VC31 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.75□□□□□ -2.13
Ccdc9Q8VC31 Gm12309-201ENSMUST00000119889 182 ntBASIC1.74□□□□□ -2.13
Ccdc9Q8VC31 Gm26425-201ENSMUST00000122529 82 ntBASIC1.74□□□□□ -2.13
Ccdc9Q8VC31 Gm25279-201ENSMUST00000122608 133 ntBASIC1.74□□□□□ -2.13
Ccdc9Q8VC31 Gm24379-201ENSMUST00000122695 86 ntBASIC1.74□□□□□ -2.13
Ccdc9Q8VC31 Gm22706-201ENSMUST00000157907 112 ntBASIC1.74□□□□□ -2.13
Ccdc9Q8VC31 Gm25370-201ENSMUST00000158159 94 ntBASIC1.74□□□□□ -2.13
Ccdc9Q8VC31 Gm24345-201ENSMUST00000158706 124 ntBASIC1.74□□□□□ -2.13
Ccdc9Q8VC31 Gm26073-201ENSMUST00000179906 127 ntBASIC1.74□□□□□ -2.13
Ccdc9Q8VC31 Gm28383-201ENSMUST00000187563 139 ntBASIC1.74□□□□□ -2.13
Ccdc9Q8VC31 Mir3087-201ENSMUST00000199405 56 ntBASIC1.74□□□□□ -2.13
Ccdc9Q8VC31 Mir411-201ENSMUST00000083543 82 ntBASIC1.74□□□□□ -2.13
Ccdc9Q8VC31 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Ccdc9Q8VC31 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.73□□□□□ -2.13
Ccdc9Q8VC31 Gm23390-201ENSMUST00000157393 106 ntBASIC1.73□□□□□ -2.13
Ccdc9Q8VC31 Gm25329-201ENSMUST00000158041 126 ntBASIC1.73□□□□□ -2.13
Ccdc9Q8VC31 Gm25449-201ENSMUST00000179389 79 ntBASIC1.73□□□□□ -2.13
Ccdc9Q8VC31 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Ccdc9Q8VC31 Gm14882-201ENSMUST00000117216 218 ntBASIC1.72□□□□□ -2.13
Ccdc9Q8VC31 Gm24593-201ENSMUST00000122507 106 ntBASIC1.72□□□□□ -2.13
Ccdc9Q8VC31 n-R5s39-201ENSMUST00000122613 108 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 136.6 ms