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Protein–RNA interactions for Protein: Q8K2Q9
Shtn1, Shootin-1, mouse
Predictions only
Length
631 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (Experimental data)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
Shtn1
Q8K2Q9
Gm24445-201
ENSMUST00000083981
107 nt
BASIC
1.35
□□□□□ -2.19
Shtn1
Q8K2Q9
Olfr805-203
ENSMUST00000216794
3199 nt
APPRIS P1
TSL 5
BASIC
1.35
□□□□□ -2.19
Shtn1
Q8K2Q9
Gm23708-201
ENSMUST00000104367
123 nt
BASIC
1.34
□□□□□ -2.19
Shtn1
Q8K2Q9
Gm24509-201
ENSMUST00000157086
101 nt
BASIC
1.34
□□□□□ -2.19
Shtn1
Q8K2Q9
Gm25358-201
ENSMUST00000157189
101 nt
BASIC
1.34
□□□□□ -2.19
Shtn1
Q8K2Q9
Gm16550-201
ENSMUST00000162550
126 nt
BASIC
1.34
□□□□□ -2.19
Shtn1
Q8K2Q9
Mir219b-201
ENSMUST00000198317
65 nt
BASIC
1.34
□□□□□ -2.19
Shtn1
Q8K2Q9
Gm22074-201
ENSMUST00000158595
113 nt
BASIC
1.33
□□□□□ -2.2
Shtn1
Q8K2Q9
Mir7091-201
ENSMUST00000184075
79 nt
BASIC
1.33
□□□□□ -2.2
Shtn1
Q8K2Q9
Gm43898-201
ENSMUST00000204456
424 nt
BASIC
1.33
□□□□□ -2.2
Shtn1
Q8K2Q9
Gm44560-201
ENSMUST00000207816
3115 nt
BASIC
1.33
□□□□□ -2.2
Shtn1
Q8K2Q9
Traj45-201
ENSMUST00000103697
63 nt
APPRIS P1
BASIC
1.32
□□□□□ -2.2
Shtn1
Q8K2Q9
Gm24401-201
ENSMUST00000157868
91 nt
BASIC
1.32
□□□□□ -2.2
Shtn1
Q8K2Q9
Gm23509-201
ENSMUST00000083080
160 nt
BASIC
1.32
□□□□□ -2.2
Shtn1
Q8K2Q9
Olfr867-202
ENSMUST00000212098
4228 nt
TSL 3
BASIC
1.31
□□□□□ -2.2
Shtn1
Q8K2Q9
Mir709-201
ENSMUST00000102190
88 nt
BASIC
1.31
□□□□□ -2.2
Shtn1
Q8K2Q9
Gm25610-201
ENSMUST00000104016
129 nt
BASIC
1.31
□□□□□ -2.2
Shtn1
Q8K2Q9
Gm24141-201
ENSMUST00000122776
115 nt
BASIC
1.31
□□□□□ -2.2
Shtn1
Q8K2Q9
Gm23838-201
ENSMUST00000158067
162 nt
BASIC
1.31
□□□□□ -2.2
Shtn1
Q8K2Q9
Gm22515-201
ENSMUST00000158273
305 nt
BASIC
1.31
□□□□□ -2.2
Shtn1
Q8K2Q9
Gm23763-201
ENSMUST00000158345
60 nt
BASIC
1.31
□□□□□ -2.2
Shtn1
Q8K2Q9
Gm25901-201
ENSMUST00000158494
130 nt
BASIC
1.31
□□□□□ -2.2
Shtn1
Q8K2Q9
Gm24221-201
ENSMUST00000158833
313 nt
BASIC
1.31
□□□□□ -2.2
Shtn1
Q8K2Q9
Gm23504-201
ENSMUST00000158988
95 nt
BASIC
1.31
□□□□□ -2.2
Shtn1
Q8K2Q9
Gm20409-201
ENSMUST00000173457
130 nt
BASIC
1.31
□□□□□ -2.2
Shtn1
Q8K2Q9
Igkv13-78-1-201
ENSMUST00000199298
200 nt
BASIC
1.31
□□□□□ -2.2
Shtn1
Q8K2Q9
Mir3094-201
ENSMUST00000175121
64 nt
BASIC
1.3
□□□□□ -2.2
Shtn1
Q8K2Q9
Gm44807-201
ENSMUST00000206115
154 nt
BASIC
1.3
□□□□□ -2.2
Shtn1
Q8K2Q9
Gm45741-201
ENSMUST00000212661
152 nt
TSL 1 (best)
BASIC
1.3
□□□□□ -2.2
Shtn1
Q8K2Q9
Olfr832-202
ENSMUST00000218385
4435 nt
APPRIS P1
TSL 5
BASIC
1.29
□□□□□ -2.2
Shtn1
Q8K2Q9
Gm25166-201
ENSMUST00000158909
111 nt
BASIC
1.29
□□□□□ -2.2
Shtn1
Q8K2Q9
Gm23008-201
ENSMUST00000158946
80 nt
BASIC
1.29
□□□□□ -2.2
Shtn1
Q8K2Q9
Rnu6-ps2-201
ENSMUST00000178059
107 nt
BASIC
1.29
□□□□□ -2.2
Shtn1
Q8K2Q9
Mir6381-201
ENSMUST00000183426
87 nt
BASIC
1.29
□□□□□ -2.2
Shtn1
Q8K2Q9
Gm44470-201
ENSMUST00000203913
142 nt
BASIC
1.29
□□□□□ -2.2
Shtn1
Q8K2Q9
Snora41-201
ENSMUST00000082668
132 nt
BASIC
1.29
□□□□□ -2.2
Shtn1
Q8K2Q9
Gm23678-201
ENSMUST00000083157
107 nt
BASIC
1.29
□□□□□ -2.2
Shtn1
Q8K2Q9
Mir30c-2-201
ENSMUST00000083633
84 nt
BASIC
1.29
□□□□□ -2.2
Shtn1
Q8K2Q9
Arhgap5-204
ENSMUST00000219443
9323 nt
APPRIS P1
TSL 5
BASIC
1.28
□□□□□ -2.2
Shtn1
Q8K2Q9
Gm22801-201
ENSMUST00000175624
84 nt
BASIC
1.28
□□□□□ -2.2
Shtn1
Q8K2Q9
Gm44859-201
ENSMUST00000207831
94 nt
BASIC
1.28
□□□□□ -2.2
Shtn1
Q8K2Q9
Gm24311-201
ENSMUST00000082570
104 nt
BASIC
1.28
□□□□□ -2.2
Shtn1
Q8K2Q9
Gm23239-201
ENSMUST00000083006
181 nt
BASIC
1.28
□□□□□ -2.2
Shtn1
Q8K2Q9
Mir27b-201
ENSMUST00000083541
73 nt
BASIC
1.28
□□□□□ -2.2
Shtn1
Q8K2Q9
Mir22-201
ENSMUST00000083595
95 nt
BASIC
1.28
□□□□□ -2.2
Shtn1
Q8K2Q9
Mir466b-3-201
ENSMUST00000103806
81 nt
BASIC
1.27
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm13577-201
ENSMUST00000121365
205 nt
BASIC
1.27
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm26084-201
ENSMUST00000157903
104 nt
BASIC
1.27
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm22485-201
ENSMUST00000157990
109 nt
BASIC
1.27
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm27419-201
ENSMUST00000184576
109 nt
BASIC
1.27
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm22980-201
ENSMUST00000082608
70 nt
BASIC
1.27
□□□□□ -2.21
Shtn1
Q8K2Q9
Mir1904-201
ENSMUST00000122702
80 nt
BASIC
1.26
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm25060-201
ENSMUST00000157374
130 nt
BASIC
1.26
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm22340-201
ENSMUST00000157717
114 nt
BASIC
1.26
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm26363-201
ENSMUST00000158866
83 nt
BASIC
1.26
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm25071-201
ENSMUST00000175232
70 nt
BASIC
1.26
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm22887-201
ENSMUST00000178586
107 nt
BASIC
1.26
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm36929-201
ENSMUST00000195152
166 nt
TSL 5
BASIC
1.26
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm24616-201
ENSMUST00000083274
139 nt
BASIC
1.26
□□□□□ -2.21
Shtn1
Q8K2Q9
Mir532-201
ENSMUST00000093630
96 nt
BASIC
1.26
□□□□□ -2.21
Shtn1
Q8K2Q9
n-R5s70-201
ENSMUST00000122650
116 nt
BASIC
1.25
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm23253-201
ENSMUST00000157441
104 nt
BASIC
1.25
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm24777-201
ENSMUST00000157644
107 nt
BASIC
1.25
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm26089-201
ENSMUST00000157898
107 nt
BASIC
1.25
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm22966-201
ENSMUST00000157957
129 nt
BASIC
1.25
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm26291-201
ENSMUST00000158889
137 nt
BASIC
1.25
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm10974-201
ENSMUST00000107486
126 nt
APPRIS P1
TSL 5
BASIC
1.24
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm15654-201
ENSMUST00000152660
300 nt
BASIC
1.24
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm22349-201
ENSMUST00000157864
107 nt
BASIC
1.24
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm26337-201
ENSMUST00000178000
79 nt
BASIC
1.24
□□□□□ -2.21
Shtn1
Q8K2Q9
Mir7657-201
ENSMUST00000196051
57 nt
BASIC
1.24
□□□□□ -2.21
Shtn1
Q8K2Q9
Sycp1-ps1-201
ENSMUST00000207882
2768 nt
BASIC
1.23
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm24579-201
ENSMUST00000103964
144 nt
BASIC
1.23
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm14626-201
ENSMUST00000117619
216 nt
BASIC
1.23
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm26091-201
ENSMUST00000122704
82 nt
BASIC
1.23
□□□□□ -2.21
Shtn1
Q8K2Q9
2210418O10Rik-202
ENSMUST00000135430
195 nt
TSL 5
BASIC
1.23
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm24246-201
ENSMUST00000157315
132 nt
BASIC
1.23
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm23893-201
ENSMUST00000158106
134 nt
BASIC
1.23
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm23260-201
ENSMUST00000158317
172 nt
BASIC
1.23
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm20118-201
ENSMUST00000187207
162 nt
BASIC
1.23
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm45492-201
ENSMUST00000211611
288 nt
BASIC
1.23
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm24718-201
ENSMUST00000157521
136 nt
BASIC
1.22
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm22775-201
ENSMUST00000177630
120 nt
BASIC
1.22
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm23569-201
ENSMUST00000180120
120 nt
BASIC
1.22
□□□□□ -2.21
Shtn1
Q8K2Q9
Gm26421-201
ENSMUST00000104279
132 nt
BASIC
1.21
□□□□□ -2.22
Shtn1
Q8K2Q9
Gm14039-201
ENSMUST00000118705
101 nt
BASIC
1.21
□□□□□ -2.22
Shtn1
Q8K2Q9
Gm24717-201
ENSMUST00000157522
124 nt
BASIC
1.21
□□□□□ -2.22
Shtn1
Q8K2Q9
Gm17172-201
ENSMUST00000171782
190 nt
TSL 3
BASIC
1.21
□□□□□ -2.22
Shtn1
Q8K2Q9
Mir30f-201
ENSMUST00000196073
92 nt
BASIC
1.21
□□□□□ -2.22
Shtn1
Q8K2Q9
Gm42533-201
ENSMUST00000196247
157 nt
BASIC
1.21
□□□□□ -2.22
Shtn1
Q8K2Q9
Gm26274-201
ENSMUST00000157103
321 nt
BASIC
1.2
□□□□□ -2.22
Shtn1
Q8K2Q9
Gm22681-201
ENSMUST00000083853
106 nt
BASIC
1.2
□□□□□ -2.22
Shtn1
Q8K2Q9
Olfr307-203
ENSMUST00000217494
4515 nt
APPRIS P1
TSL 5
BASIC
1.19
□□□□□ -2.22
Shtn1
Q8K2Q9
Gm23126-201
ENSMUST00000104260
134 nt
BASIC
1.19
□□□□□ -2.22
Shtn1
Q8K2Q9
Gm23922-201
ENSMUST00000178792
79 nt
BASIC
1.19
□□□□□ -2.22
Shtn1
Q8K2Q9
Gm24657-201
ENSMUST00000180085
79 nt
BASIC
1.19
□□□□□ -2.22
Shtn1
Q8K2Q9
Gm22996-201
ENSMUST00000180236
79 nt
BASIC
1.19
□□□□□ -2.22
Shtn1
Q8K2Q9
Mir6369-201
ENSMUST00000183772
106 nt
BASIC
1.19
□□□□□ -2.22
Shtn1
Q8K2Q9
Gm28767-201
ENSMUST00000188601
114 nt
BASIC
1.19
□□□□□ -2.22
Shtn1
Q8K2Q9
1700127F24Rik-202
ENSMUST00000223214
259 nt
TSL 3
BASIC
1.19
□□□□□ -2.22
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Retrieved 100 of 76,532 protein–RNA pairs in 170.6 ms