Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Gm24728-201ENSMUST00000158226 125 ntBASIC0.91□□□□□ -2.26
Mmp28Q8CGV8 Gm25868-201ENSMUST00000158253 114 ntBASIC0.91□□□□□ -2.26
Mmp28Q8CGV8 Gm22074-201ENSMUST00000158595 113 ntBASIC0.91□□□□□ -2.26
Mmp28Q8CGV8 Gm25069-201ENSMUST00000175238 86 ntBASIC0.91□□□□□ -2.26
Mmp28Q8CGV8 Mir3098-201ENSMUST00000175416 87 ntBASIC0.91□□□□□ -2.26
Mmp28Q8CGV8 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.91□□□□□ -2.26
Mmp28Q8CGV8 Gm25128-201ENSMUST00000083339 76 ntBASIC0.91□□□□□ -2.26
Mmp28Q8CGV8 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.9□□□□□ -2.27
Mmp28Q8CGV8 Gm22381-201ENSMUST00000158186 107 ntBASIC0.9□□□□□ -2.27
Mmp28Q8CGV8 Gm26358-201ENSMUST00000158215 97 ntBASIC0.9□□□□□ -2.27
Mmp28Q8CGV8 Gm8034-201ENSMUST00000178853 132 ntBASIC0.9□□□□□ -2.27
Mmp28Q8CGV8 Mir7063-201ENSMUST00000184158 91 ntBASIC0.9□□□□□ -2.27
Mmp28Q8CGV8 Mir7009-201ENSMUST00000184519 64 ntBASIC0.9□□□□□ -2.27
Mmp28Q8CGV8 Gm42935-201ENSMUST00000202004 151 ntBASIC0.9□□□□□ -2.27
Mmp28Q8CGV8 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.9□□□□□ -2.27
Mmp28Q8CGV8 Gm23138-201ENSMUST00000083365 103 ntBASIC0.9□□□□□ -2.27
Mmp28Q8CGV8 Mir324-201ENSMUST00000083600 89 ntBASIC0.9□□□□□ -2.27
Mmp28Q8CGV8 Gm26168-201ENSMUST00000083787 112 ntBASIC0.9□□□□□ -2.27
Mmp28Q8CGV8 Gm25006-201ENSMUST00000083813 107 ntBASIC0.9□□□□□ -2.27
Mmp28Q8CGV8 Mir709-201ENSMUST00000102190 88 ntBASIC0.89□□□□□ -2.27
Mmp28Q8CGV8 Gm24271-201ENSMUST00000102327 111 ntBASIC0.89□□□□□ -2.27
Mmp28Q8CGV8 Gm22780-201ENSMUST00000104084 132 ntBASIC0.89□□□□□ -2.27
Mmp28Q8CGV8 Gm24605-201ENSMUST00000104772 96 ntBASIC0.89□□□□□ -2.27
Mmp28Q8CGV8 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.89□□□□□ -2.27
Mmp28Q8CGV8 Gm24916-201ENSMUST00000157287 79 ntBASIC0.89□□□□□ -2.27
Mmp28Q8CGV8 Gm26029-201ENSMUST00000158659 132 ntBASIC0.89□□□□□ -2.27
Mmp28Q8CGV8 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.89□□□□□ -2.27
Mmp28Q8CGV8 Gm22801-201ENSMUST00000175624 84 ntBASIC0.89□□□□□ -2.27
Mmp28Q8CGV8 Gm23267-201ENSMUST00000178490 132 ntBASIC0.89□□□□□ -2.27
Mmp28Q8CGV8 Gm20118-201ENSMUST00000187207 162 ntBASIC0.89□□□□□ -2.27
Mmp28Q8CGV8 Mir30f-201ENSMUST00000196073 92 ntBASIC0.89□□□□□ -2.27
Mmp28Q8CGV8 AC139186.1-201ENSMUST00000197610 94 ntBASIC0.89□□□□□ -2.27
Mmp28Q8CGV8 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC0.89□□□□□ -2.27
Mmp28Q8CGV8 Gm23377-201ENSMUST00000082943 126 ntBASIC0.89□□□□□ -2.27
Mmp28Q8CGV8 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
Mmp28Q8CGV8 Mir20b-201ENSMUST00000102087 80 ntBASIC0.88□□□□□ -2.27
Mmp28Q8CGV8 Scarna9-201ENSMUST00000104318 70 ntBASIC0.88□□□□□ -2.27
Mmp28Q8CGV8 Gm24913-201ENSMUST00000157286 107 ntBASIC0.88□□□□□ -2.27
Mmp28Q8CGV8 Gm22558-201ENSMUST00000157326 95 ntBASIC0.88□□□□□ -2.27
Mmp28Q8CGV8 Gm22708-201ENSMUST00000158987 103 ntBASIC0.88□□□□□ -2.27
Mmp28Q8CGV8 Gm28767-201ENSMUST00000188601 114 ntBASIC0.88□□□□□ -2.27
Mmp28Q8CGV8 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC0.88□□□□□ -2.27
Mmp28Q8CGV8 Gm24252-201ENSMUST00000083700 132 ntBASIC0.88□□□□□ -2.27
Mmp28Q8CGV8 Gm13231-201ENSMUST00000119218 2850 ntBASIC0.87□□□□□ -2.27
Mmp28Q8CGV8 Gm12013-201ENSMUST00000121971 155 ntBASIC0.87□□□□□ -2.27
Mmp28Q8CGV8 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC0.87□□□□□ -2.27
Mmp28Q8CGV8 Gm25968-201ENSMUST00000157167 100 ntBASIC0.87□□□□□ -2.27
Mmp28Q8CGV8 Gm23434-201ENSMUST00000157179 100 ntBASIC0.87□□□□□ -2.27
Mmp28Q8CGV8 Gm24547-201ENSMUST00000158649 149 ntBASIC0.87□□□□□ -2.27
Mmp28Q8CGV8 Traj61-201ENSMUST00000165025 72 ntBASIC0.87□□□□□ -2.27
Mmp28Q8CGV8 Gm23967-201ENSMUST00000175062 78 ntBASIC0.87□□□□□ -2.27
Mmp28Q8CGV8 Gm24575-201ENSMUST00000175502 77 ntBASIC0.87□□□□□ -2.27
Mmp28Q8CGV8 Mir8119-201ENSMUST00000183371 129 ntBASIC0.87□□□□□ -2.27
Mmp28Q8CGV8 Gm37330-201ENSMUST00000192606 153 ntBASIC0.87□□□□□ -2.27
Mmp28Q8CGV8 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.87□□□□□ -2.27
Mmp28Q8CGV8 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC0.87□□□□□ -2.27
Mmp28Q8CGV8 mt-Ts2-201ENSMUST00000082416 59 ntBASIC0.87□□□□□ -2.27
Mmp28Q8CGV8 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
Mmp28Q8CGV8 Mir343-201ENSMUST00000102360 75 ntBASIC0.86□□□□□ -2.27
Mmp28Q8CGV8 Mir1899-201ENSMUST00000122798 96 ntBASIC0.86□□□□□ -2.27
Mmp28Q8CGV8 Gm22515-201ENSMUST00000158273 305 ntBASIC0.86□□□□□ -2.27
Mmp28Q8CGV8 Mir6380-201ENSMUST00000184334 81 ntBASIC0.86□□□□□ -2.27
Mmp28Q8CGV8 AC168062.3-201ENSMUST00000227025 165 ntBASIC0.86□□□□□ -2.27
Mmp28Q8CGV8 Gm24311-201ENSMUST00000082570 104 ntBASIC0.86□□□□□ -2.27
Mmp28Q8CGV8 Gm24476-201ENSMUST00000157437 131 ntBASIC0.85□□□□□ -2.27
Mmp28Q8CGV8 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.85□□□□□ -2.27
Mmp28Q8CGV8 Gm26498-201ENSMUST00000177799 79 ntBASIC0.85□□□□□ -2.27
Mmp28Q8CGV8 Gm26230-201ENSMUST00000180141 79 ntBASIC0.85□□□□□ -2.27
Mmp28Q8CGV8 Gm27326-201ENSMUST00000183504 95 ntBASIC0.85□□□□□ -2.27
Mmp28Q8CGV8 Mir6962-201ENSMUST00000199512 63 ntBASIC0.85□□□□□ -2.27
Mmp28Q8CGV8 AC126939.1-201ENSMUST00000224943 226 ntBASIC0.85□□□□□ -2.27
Mmp28Q8CGV8 n-R5s39-201ENSMUST00000122613 108 ntBASIC0.84□□□□□ -2.27
Mmp28Q8CGV8 Mir1933-201ENSMUST00000158930 88 ntBASIC0.84□□□□□ -2.27
Mmp28Q8CGV8 Mir6381-201ENSMUST00000183426 87 ntBASIC0.84□□□□□ -2.27
Mmp28Q8CGV8 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
Mmp28Q8CGV8 Gm38323-201ENSMUST00000192450 210 ntBASIC0.84□□□□□ -2.27
Mmp28Q8CGV8 Trbv25-201ENSMUST00000194700 273 ntBASIC0.84□□□□□ -2.27
Mmp28Q8CGV8 Gm25110-201ENSMUST00000116684 121 ntBASIC0.83□□□□□ -2.28
Mmp28Q8CGV8 Gm25775-201ENSMUST00000116716 121 ntBASIC0.83□□□□□ -2.28
Mmp28Q8CGV8 Gm24795-201ENSMUST00000116737 121 ntBASIC0.83□□□□□ -2.28
Mmp28Q8CGV8 Gm25171-201ENSMUST00000116926 121 ntBASIC0.83□□□□□ -2.28
Mmp28Q8CGV8 Gm11248-201ENSMUST00000119568 201 ntBASIC0.83□□□□□ -2.28
Mmp28Q8CGV8 Gm25444-201ENSMUST00000158999 113 ntBASIC0.83□□□□□ -2.28
Mmp28Q8CGV8 Gm23636-201ENSMUST00000175070 95 ntBASIC0.83□□□□□ -2.28
Mmp28Q8CGV8 Gm24926-201ENSMUST00000178053 79 ntBASIC0.83□□□□□ -2.28
Mmp28Q8CGV8 Gm22632-201ENSMUST00000178266 79 ntBASIC0.83□□□□□ -2.28
Mmp28Q8CGV8 Mir7665-201ENSMUST00000184907 63 ntBASIC0.83□□□□□ -2.28
Mmp28Q8CGV8 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.83□□□□□ -2.28
Mmp28Q8CGV8 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.83□□□□□ -2.28
Mmp28Q8CGV8 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.83□□□□□ -2.28
Mmp28Q8CGV8 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.83□□□□□ -2.28
Mmp28Q8CGV8 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.83□□□□□ -2.28
Mmp28Q8CGV8 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.83□□□□□ -2.28
Mmp28Q8CGV8 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.83□□□□□ -2.28
Mmp28Q8CGV8 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.83□□□□□ -2.28
Mmp28Q8CGV8 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.83□□□□□ -2.28
Mmp28Q8CGV8 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.83□□□□□ -2.28
Mmp28Q8CGV8 Gm24705-201ENSMUST00000082808 107 ntBASIC0.83□□□□□ -2.28
Mmp28Q8CGV8 Snord60-201ENSMUST00000082834 78 ntBASIC0.83□□□□□ -2.28
Mmp28Q8CGV8 Mir500-201ENSMUST00000093600 92 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 169.5 ms