Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm24656-201ENSMUST00000177548 132 ntBASIC2.38□□□□□ -2.03
Usp40Q8BWR4 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Usp40Q8BWR4 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC2.37□□□□□ -2.03
Usp40Q8BWR4 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
Usp40Q8BWR4 Gm24049-201ENSMUST00000102409 100 ntBASIC2.37□□□□□ -2.03
Usp40Q8BWR4 Gm26080-201ENSMUST00000104069 131 ntBASIC2.37□□□□□ -2.03
Usp40Q8BWR4 Gm22048-201ENSMUST00000104721 89 ntBASIC2.37□□□□□ -2.03
Usp40Q8BWR4 Gm26004-201ENSMUST00000158804 116 ntBASIC2.37□□□□□ -2.03
Usp40Q8BWR4 Mir6905-201ENSMUST00000184228 70 ntBASIC2.37□□□□□ -2.03
Usp40Q8BWR4 Gm27639-201ENSMUST00000184937 85 ntBASIC2.37□□□□□ -2.03
Usp40Q8BWR4 Gm19855-201ENSMUST00000210145 249 ntBASIC2.37□□□□□ -2.03
Usp40Q8BWR4 Mir423-201ENSMUST00000083584 109 ntBASIC2.37□□□□□ -2.03
Usp40Q8BWR4 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Usp40Q8BWR4 Gm25711-201ENSMUST00000158633 128 ntBASIC2.36□□□□□ -2.03
Usp40Q8BWR4 Gm25996-201ENSMUST00000175393 117 ntBASIC2.36□□□□□ -2.03
Usp40Q8BWR4 AL772271.1-201ENSMUST00000196848 65 ntBASIC2.36□□□□□ -2.03
Usp40Q8BWR4 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.36□□□□□ -2.03
Usp40Q8BWR4 Gm25899-201ENSMUST00000082672 141 ntBASIC2.36□□□□□ -2.03
Usp40Q8BWR4 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Usp40Q8BWR4 Gm23528-201ENSMUST00000104571 132 ntBASIC2.35□□□□□ -2.03
Usp40Q8BWR4 Gm25847-201ENSMUST00000116793 96 ntBASIC2.35□□□□□ -2.03
Usp40Q8BWR4 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Usp40Q8BWR4 Gm45386-201ENSMUST00000210194 218 ntBASIC2.35□□□□□ -2.03
Usp40Q8BWR4 AC069074.1-201ENSMUST00000220048 381 ntBASIC2.35□□□□□ -2.03
Usp40Q8BWR4 Gm25644-201ENSMUST00000083209 107 ntBASIC2.35□□□□□ -2.03
Usp40Q8BWR4 Gm22743-201ENSMUST00000083445 133 ntBASIC2.35□□□□□ -2.03
Usp40Q8BWR4 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.35□□□□□ -2.03
Usp40Q8BWR4 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.34□□□□□ -2.03
Usp40Q8BWR4 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Usp40Q8BWR4 Gm25611-201ENSMUST00000104017 133 ntBASIC2.34□□□□□ -2.03
Usp40Q8BWR4 Gm22551-201ENSMUST00000157795 103 ntBASIC2.34□□□□□ -2.03
Usp40Q8BWR4 Gm26090-201ENSMUST00000157897 128 ntBASIC2.34□□□□□ -2.03
Usp40Q8BWR4 Gm22888-201ENSMUST00000158640 77 ntBASIC2.34□□□□□ -2.03
Usp40Q8BWR4 Gm27878-201ENSMUST00000184000 106 ntBASIC2.34□□□□□ -2.03
Usp40Q8BWR4 Gm25820-201ENSMUST00000198589 127 ntBASIC2.34□□□□□ -2.03
Usp40Q8BWR4 Gm44807-201ENSMUST00000206115 154 ntBASIC2.34□□□□□ -2.03
Usp40Q8BWR4 Mir451a-201ENSMUST00000093557 72 ntBASIC2.34□□□□□ -2.03
Usp40Q8BWR4 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Usp40Q8BWR4 Gm25542-201ENSMUST00000116889 94 ntBASIC2.33□□□□□ -2.04
Usp40Q8BWR4 Gm23390-201ENSMUST00000157393 106 ntBASIC2.33□□□□□ -2.04
Usp40Q8BWR4 Gm26181-201ENSMUST00000157687 106 ntBASIC2.33□□□□□ -2.04
Usp40Q8BWR4 Gm23854-201ENSMUST00000158378 108 ntBASIC2.33□□□□□ -2.04
Usp40Q8BWR4 Gm22095-201ENSMUST00000158984 150 ntBASIC2.33□□□□□ -2.04
Usp40Q8BWR4 Gm42935-201ENSMUST00000202004 151 ntBASIC2.33□□□□□ -2.04
Usp40Q8BWR4 Gm25705-201ENSMUST00000083119 104 ntBASIC2.33□□□□□ -2.04
Usp40Q8BWR4 Gm26478-201ENSMUST00000122611 133 ntBASIC2.32□□□□□ -2.04
Usp40Q8BWR4 Snora26-201ENSMUST00000175614 121 ntBASIC2.32□□□□□ -2.04
Usp40Q8BWR4 Gm45471-201ENSMUST00000211270 281 ntBASIC2.32□□□□□ -2.04
Usp40Q8BWR4 Gm6109-201ENSMUST00000223297 348 ntBASIC2.32□□□□□ -2.04
Usp40Q8BWR4 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.32□□□□□ -2.04
Usp40Q8BWR4 Gm24162-201ENSMUST00000093665 102 ntBASIC2.32□□□□□ -2.04
Usp40Q8BWR4 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.32□□□□□ -2.04
Usp40Q8BWR4 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Usp40Q8BWR4 Gm23785-201ENSMUST00000116741 96 ntBASIC2.31□□□□□ -2.04
Usp40Q8BWR4 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC2.31□□□□□ -2.04
Usp40Q8BWR4 Gm20305-201ENSMUST00000193226 177 ntBASIC2.31□□□□□ -2.04
Usp40Q8BWR4 mt-Tc-201ENSMUST00000082400 66 ntBASIC2.31□□□□□ -2.04
Usp40Q8BWR4 Gm22140-201ENSMUST00000158745 120 ntBASIC2.3□□□□□ -2.04
Usp40Q8BWR4 Gm16307-201ENSMUST00000161269 210 ntBASIC2.3□□□□□ -2.04
Usp40Q8BWR4 Gm25635-201ENSMUST00000082675 131 ntBASIC2.3□□□□□ -2.04
Usp40Q8BWR4 Gm25854-201ENSMUST00000082792 72 ntBASIC2.3□□□□□ -2.04
Usp40Q8BWR4 Gm23376-201ENSMUST00000082938 160 ntBASIC2.3□□□□□ -2.04
Usp40Q8BWR4 Mir320-201ENSMUST00000083594 82 ntBASIC2.3□□□□□ -2.04
Usp40Q8BWR4 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Usp40Q8BWR4 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Usp40Q8BWR4 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.3□□□□□ -2.04
Usp40Q8BWR4 Gm11856-201ENSMUST00000118712 276 ntBASIC2.29□□□□□ -2.04
Usp40Q8BWR4 Gm22999-201ENSMUST00000157082 88 ntBASIC2.29□□□□□ -2.04
Usp40Q8BWR4 Gm24668-201ENSMUST00000158935 104 ntBASIC2.29□□□□□ -2.04
Usp40Q8BWR4 Gm26398-201ENSMUST00000179015 127 ntBASIC2.29□□□□□ -2.04
Usp40Q8BWR4 Gm23370-201ENSMUST00000199545 130 ntBASIC2.29□□□□□ -2.04
Usp40Q8BWR4 mt-Tn-201ENSMUST00000082399 71 ntBASIC2.29□□□□□ -2.04
Usp40Q8BWR4 Mir29c-201ENSMUST00000083614 88 ntBASIC2.29□□□□□ -2.04
Usp40Q8BWR4 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Usp40Q8BWR4 Mir764-201ENSMUST00000103259 108 ntBASIC2.28□□□□□ -2.04
Usp40Q8BWR4 Gm11248-201ENSMUST00000119568 201 ntBASIC2.28□□□□□ -2.04
Usp40Q8BWR4 Gm22205-201ENSMUST00000122655 71 ntBASIC2.28□□□□□ -2.04
Usp40Q8BWR4 Gm22768-201ENSMUST00000158366 153 ntBASIC2.28□□□□□ -2.04
Usp40Q8BWR4 Gm28383-201ENSMUST00000187563 139 ntBASIC2.28□□□□□ -2.04
Usp40Q8BWR4 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC2.28□□□□□ -2.04
Usp40Q8BWR4 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Usp40Q8BWR4 Gm25417-201ENSMUST00000104212 131 ntBASIC2.27□□□□□ -2.05
Usp40Q8BWR4 Gm23203-201ENSMUST00000104374 107 ntBASIC2.27□□□□□ -2.05
Usp40Q8BWR4 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC2.27□□□□□ -2.05
Usp40Q8BWR4 Mir6379-201ENSMUST00000183392 115 ntBASIC2.27□□□□□ -2.05
Usp40Q8BWR4 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Usp40Q8BWR4 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.27□□□□□ -2.05
Usp40Q8BWR4 Mir410-201ENSMUST00000083563 81 ntBASIC2.27□□□□□ -2.05
Usp40Q8BWR4 Mir880-201ENSMUST00000104809 78 ntBASIC2.26□□□□□ -2.05
Usp40Q8BWR4 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.26□□□□□ -2.05
Usp40Q8BWR4 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.26□□□□□ -2.05
Usp40Q8BWR4 Gm25831-201ENSMUST00000158924 163 ntBASIC2.26□□□□□ -2.05
Usp40Q8BWR4 Gm23299-201ENSMUST00000082708 79 ntBASIC2.26□□□□□ -2.05
Usp40Q8BWR4 Gm24412-201ENSMUST00000083426 109 ntBASIC2.26□□□□□ -2.05
Usp40Q8BWR4 Gm25322-201ENSMUST00000122556 104 ntBASIC2.25□□□□□ -2.05
Usp40Q8BWR4 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Usp40Q8BWR4 Gm24902-201ENSMUST00000158126 123 ntBASIC2.25□□□□□ -2.05
Usp40Q8BWR4 Gm20391-201ENSMUST00000174722 106 ntBASIC2.25□□□□□ -2.05
Usp40Q8BWR4 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
Usp40Q8BWR4 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 158 ms