Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Ubp1Q811S7 Gm22099-201ENSMUST00000157925 123 ntBASIC1.99□□□□□ -2.09
Ubp1Q811S7 Gm23342-201ENSMUST00000158958 115 ntBASIC1.99□□□□□ -2.09
Ubp1Q811S7 Mir532-201ENSMUST00000093630 96 ntBASIC1.99□□□□□ -2.09
Ubp1Q811S7 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.98□□□□□ -2.09
Ubp1Q811S7 Mir669d-201ENSMUST00000104644 121 ntBASIC1.98□□□□□ -2.09
Ubp1Q811S7 Gm23351-201ENSMUST00000158427 125 ntBASIC1.98□□□□□ -2.09
Ubp1Q811S7 Gm24677-201ENSMUST00000158755 150 ntBASIC1.98□□□□□ -2.09
Ubp1Q811S7 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC1.98□□□□□ -2.09
Ubp1Q811S7 Mir7016-201ENSMUST00000184308 72 ntBASIC1.98□□□□□ -2.09
Ubp1Q811S7 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.98□□□□□ -2.09
Ubp1Q811S7 Mir7217-201ENSMUST00000200304 62 ntBASIC1.98□□□□□ -2.09
Ubp1Q811S7 Gm43977-201ENSMUST00000203970 189 ntBASIC1.98□□□□□ -2.09
Ubp1Q811S7 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.96□□□□□ -2.1
Ubp1Q811S7 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Ubp1Q811S7 Gm24098-201ENSMUST00000102075 109 ntBASIC1.96□□□□□ -2.1
Ubp1Q811S7 Gm25381-201ENSMUST00000102078 109 ntBASIC1.96□□□□□ -2.1
Ubp1Q811S7 Mir653-201ENSMUST00000102402 85 ntBASIC1.96□□□□□ -2.1
Ubp1Q811S7 Gm25393-201ENSMUST00000157336 285 ntBASIC1.96□□□□□ -2.1
Ubp1Q811S7 Gm25460-201ENSMUST00000157954 127 ntBASIC1.96□□□□□ -2.1
Ubp1Q811S7 Gm26358-201ENSMUST00000158215 97 ntBASIC1.96□□□□□ -2.1
Ubp1Q811S7 Gm23813-201ENSMUST00000175153 77 ntBASIC1.96□□□□□ -2.1
Ubp1Q811S7 Gm24575-201ENSMUST00000175502 77 ntBASIC1.96□□□□□ -2.1
Ubp1Q811S7 Gm22809-201ENSMUST00000082743 156 ntBASIC1.96□□□□□ -2.1
Ubp1Q811S7 Mir322-201ENSMUST00000083484 95 ntBASIC1.96□□□□□ -2.1
Ubp1Q811S7 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Ubp1Q811S7 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC1.95□□□□□ -2.1
Ubp1Q811S7 Mir3083-201ENSMUST00000175377 64 ntBASIC1.95□□□□□ -2.1
Ubp1Q811S7 Gm27443-201ENSMUST00000184660 98 ntBASIC1.95□□□□□ -2.1
Ubp1Q811S7 Gm44320-201ENSMUST00000199276 86 ntBASIC1.95□□□□□ -2.1
Ubp1Q811S7 Gm24099-201ENSMUST00000083384 107 ntBASIC1.95□□□□□ -2.1
Ubp1Q811S7 Scarna9-201ENSMUST00000104318 70 ntBASIC1.94□□□□□ -2.1
Ubp1Q811S7 Gm22089-201ENSMUST00000158336 102 ntBASIC1.94□□□□□ -2.1
Ubp1Q811S7 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.94□□□□□ -2.1
Ubp1Q811S7 Mir6997-201ENSMUST00000184313 71 ntBASIC1.94□□□□□ -2.1
Ubp1Q811S7 Trbv25-201ENSMUST00000194700 273 ntBASIC1.94□□□□□ -2.1
Ubp1Q811S7 Mir324-201ENSMUST00000083600 89 ntBASIC1.94□□□□□ -2.1
Ubp1Q811S7 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.94□□□□□ -2.1
Ubp1Q811S7 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
Ubp1Q811S7 Mir709-201ENSMUST00000102190 88 ntBASIC1.93□□□□□ -2.1
Ubp1Q811S7 Gm24262-201ENSMUST00000157431 144 ntBASIC1.93□□□□□ -2.1
Ubp1Q811S7 Gm22503-201ENSMUST00000158983 115 ntBASIC1.93□□□□□ -2.1
Ubp1Q811S7 Mir8090-201ENSMUST00000185078 136 ntBASIC1.93□□□□□ -2.1
Ubp1Q811S7 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.93□□□□□ -2.1
Ubp1Q811S7 Gm22251-201ENSMUST00000083216 107 ntBASIC1.93□□□□□ -2.1
Ubp1Q811S7 Gm25541-201ENSMUST00000116888 126 ntBASIC1.92□□□□□ -2.1
Ubp1Q811S7 Gm24728-201ENSMUST00000158226 125 ntBASIC1.92□□□□□ -2.1
Ubp1Q811S7 Gm22429-201ENSMUST00000158553 130 ntBASIC1.92□□□□□ -2.1
Ubp1Q811S7 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.92□□□□□ -2.1
Ubp1Q811S7 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1.92□□□□□ -2.1
Ubp1Q811S7 Snord96a-201ENSMUST00000082791 81 ntBASIC1.92□□□□□ -2.1
Ubp1Q811S7 Snord80-201ENSMUST00000083801 81 ntBASIC1.92□□□□□ -2.1
Ubp1Q811S7 Gm25485-201ENSMUST00000104120 132 ntBASIC1.91□□□□□ -2.1
Ubp1Q811S7 Gm24588-201ENSMUST00000116696 83 ntBASIC1.91□□□□□ -2.1
Ubp1Q811S7 Gm24915-201ENSMUST00000157288 78 ntBASIC1.91□□□□□ -2.1
Ubp1Q811S7 Gm24223-201ENSMUST00000158827 90 ntBASIC1.91□□□□□ -2.1
Ubp1Q811S7 Gm26290-201ENSMUST00000158891 145 ntBASIC1.91□□□□□ -2.1
Ubp1Q811S7 Gm7258-201ENSMUST00000179317 300 ntBASIC1.91□□□□□ -2.1
Ubp1Q811S7 Gm25022-201ENSMUST00000102205 83 ntBASIC1.9□□□□□ -2.11
Ubp1Q811S7 Gm14882-201ENSMUST00000117216 218 ntBASIC1.9□□□□□ -2.11
Ubp1Q811S7 Gm16265-201ENSMUST00000134558 108 ntBASIC1.9□□□□□ -2.11
Ubp1Q811S7 Gm22706-201ENSMUST00000157907 112 ntBASIC1.9□□□□□ -2.11
Ubp1Q811S7 Gm23763-201ENSMUST00000158345 60 ntBASIC1.9□□□□□ -2.11
Ubp1Q811S7 Gm24770-201ENSMUST00000158505 92 ntBASIC1.9□□□□□ -2.11
Ubp1Q811S7 Mir467a-6-201ENSMUST00000177790 83 ntBASIC1.9□□□□□ -2.11
Ubp1Q811S7 Mir467a-3-201ENSMUST00000178082 83 ntBASIC1.9□□□□□ -2.11
Ubp1Q811S7 Mir467a-7-201ENSMUST00000178635 83 ntBASIC1.9□□□□□ -2.11
Ubp1Q811S7 Mir467a-10-201ENSMUST00000179320 83 ntBASIC1.9□□□□□ -2.11
Ubp1Q811S7 Mir467a-5-201ENSMUST00000179352 83 ntBASIC1.9□□□□□ -2.11
Ubp1Q811S7 Mir467a-2-201ENSMUST00000179447 83 ntBASIC1.9□□□□□ -2.11
Ubp1Q811S7 Mir467a-9-201ENSMUST00000179752 83 ntBASIC1.9□□□□□ -2.11
Ubp1Q811S7 Mir467a-4-201ENSMUST00000179923 83 ntBASIC1.9□□□□□ -2.11
Ubp1Q811S7 Mir467a-8-201ENSMUST00000180070 83 ntBASIC1.9□□□□□ -2.11
Ubp1Q811S7 Mir7241-201ENSMUST00000184532 64 ntBASIC1.9□□□□□ -2.11
Ubp1Q811S7 Gm27959-201ENSMUST00000185172 111 ntBASIC1.9□□□□□ -2.11
Ubp1Q811S7 Gm44948-201ENSMUST00000209050 149 ntBASIC1.9□□□□□ -2.11
Ubp1Q811S7 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.9□□□□□ -2.11
Ubp1Q811S7 AC140930.2-201ENSMUST00000221803 109 ntBASIC1.9□□□□□ -2.11
Ubp1Q811S7 Gm26109-201ENSMUST00000083970 70 ntBASIC1.9□□□□□ -2.11
Ubp1Q811S7 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.9□□□□□ -2.11
Ubp1Q811S7 Gm22727-201ENSMUST00000158090 116 ntBASIC1.89□□□□□ -2.11
Ubp1Q811S7 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.89□□□□□ -2.11
Ubp1Q811S7 Mir6901-201ENSMUST00000185062 62 ntBASIC1.89□□□□□ -2.11
Ubp1Q811S7 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.89□□□□□ -2.11
Ubp1Q811S7 Mir30c-2-201ENSMUST00000083633 84 ntBASIC1.89□□□□□ -2.11
Ubp1Q811S7 Gm25629-201ENSMUST00000084001 107 ntBASIC1.89□□□□□ -2.11
Ubp1Q811S7 Mir1191-201ENSMUST00000116883 120 ntBASIC1.88□□□□□ -2.11
Ubp1Q811S7 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.88□□□□□ -2.11
Ubp1Q811S7 Gm23469-201ENSMUST00000157131 104 ntBASIC1.88□□□□□ -2.11
Ubp1Q811S7 Gm27420-201ENSMUST00000183823 79 ntBASIC1.88□□□□□ -2.11
Ubp1Q811S7 Gm26062-201ENSMUST00000083379 107 ntBASIC1.88□□□□□ -2.11
Ubp1Q811S7 Mir30d-201ENSMUST00000083503 82 ntBASIC1.88□□□□□ -2.11
Ubp1Q811S7 Gm22494-201ENSMUST00000104495 128 ntBASIC1.87□□□□□ -2.11
Ubp1Q811S7 Gm26369-201ENSMUST00000157825 100 ntBASIC1.87□□□□□ -2.11
Ubp1Q811S7 Mir1961-201ENSMUST00000158643 112 ntBASIC1.87□□□□□ -2.11
Ubp1Q811S7 Gm25936-201ENSMUST00000179952 114 ntBASIC1.87□□□□□ -2.11
Ubp1Q811S7 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.87□□□□□ -2.11
Ubp1Q811S7 Mir764-201ENSMUST00000103259 108 ntBASIC1.86□□□□□ -2.11
Ubp1Q811S7 Mir873a-201ENSMUST00000104863 77 ntBASIC1.86□□□□□ -2.11
Ubp1Q811S7 Gm25289-201ENSMUST00000122799 119 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 141.8 ms