Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm25038-201ENSMUST00000082928 130 ntBASIC2.13□□□□□ -2.07
Trim56Q80VI1 Mir30d-201ENSMUST00000083503 82 ntBASIC2.13□□□□□ -2.07
Trim56Q80VI1 Gm24394-201ENSMUST00000158141 123 ntBASIC2.12□□□□□ -2.07
Trim56Q80VI1 Gm25658-201ENSMUST00000158472 128 ntBASIC2.12□□□□□ -2.07
Trim56Q80VI1 Gm22403-201ENSMUST00000174919 84 ntBASIC2.12□□□□□ -2.07
Trim56Q80VI1 Mir6950-201ENSMUST00000184438 73 ntBASIC2.12□□□□□ -2.07
Trim56Q80VI1 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Trim56Q80VI1 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Trim56Q80VI1 Mir20b-201ENSMUST00000102087 80 ntBASIC2.11□□□□□ -2.07
Trim56Q80VI1 Gm23652-201ENSMUST00000116752 107 ntBASIC2.11□□□□□ -2.07
Trim56Q80VI1 Gm14882-201ENSMUST00000117216 218 ntBASIC2.11□□□□□ -2.07
Trim56Q80VI1 Gm20118-201ENSMUST00000187207 162 ntBASIC2.11□□□□□ -2.07
Trim56Q80VI1 Gm43865-201ENSMUST00000204721 127 ntBASIC2.11□□□□□ -2.07
Trim56Q80VI1 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.11□□□□□ -2.07
Trim56Q80VI1 Gm23100-201ENSMUST00000083455 141 ntBASIC2.11□□□□□ -2.07
Trim56Q80VI1 Gm26051-201ENSMUST00000104642 93 ntBASIC2.1□□□□□ -2.07
Trim56Q80VI1 Gm23351-201ENSMUST00000158427 125 ntBASIC2.1□□□□□ -2.07
Trim56Q80VI1 Gm25836-201ENSMUST00000158918 123 ntBASIC2.1□□□□□ -2.07
Trim56Q80VI1 Mir6352-201ENSMUST00000184495 116 ntBASIC2.1□□□□□ -2.07
Trim56Q80VI1 Gm28256-201ENSMUST00000188953 139 ntBASIC2.1□□□□□ -2.07
Trim56Q80VI1 Gm28559-201ENSMUST00000190532 139 ntBASIC2.1□□□□□ -2.07
Trim56Q80VI1 Mir802-201ENSMUST00000103258 97 ntBASIC2.09□□□□□ -2.07
Trim56Q80VI1 Gm25279-201ENSMUST00000122608 133 ntBASIC2.09□□□□□ -2.07
Trim56Q80VI1 Gm22706-201ENSMUST00000157907 112 ntBASIC2.09□□□□□ -2.07
Trim56Q80VI1 Gm26398-201ENSMUST00000179015 127 ntBASIC2.09□□□□□ -2.07
Trim56Q80VI1 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC2.09□□□□□ -2.07
Trim56Q80VI1 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC2.09□□□□□ -2.07
Trim56Q80VI1 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC2.09□□□□□ -2.07
Trim56Q80VI1 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC2.09□□□□□ -2.07
Trim56Q80VI1 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC2.09□□□□□ -2.07
Trim56Q80VI1 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC2.09□□□□□ -2.07
Trim56Q80VI1 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC2.09□□□□□ -2.07
Trim56Q80VI1 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC2.09□□□□□ -2.07
Trim56Q80VI1 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC2.09□□□□□ -2.07
Trim56Q80VI1 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC2.09□□□□□ -2.07
Trim56Q80VI1 Mir410-201ENSMUST00000083563 81 ntBASIC2.09□□□□□ -2.07
Trim56Q80VI1 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trim56Q80VI1 Gm23010-201ENSMUST00000104151 126 ntBASIC2.08□□□□□ -2.08
Trim56Q80VI1 Gm24509-201ENSMUST00000157086 101 ntBASIC2.08□□□□□ -2.08
Trim56Q80VI1 Gm23172-201ENSMUST00000157160 124 ntBASIC2.08□□□□□ -2.08
Trim56Q80VI1 Gm25358-201ENSMUST00000157189 101 ntBASIC2.08□□□□□ -2.08
Trim56Q80VI1 Gm23838-201ENSMUST00000158067 162 ntBASIC2.08□□□□□ -2.08
Trim56Q80VI1 Gm22089-201ENSMUST00000158336 102 ntBASIC2.08□□□□□ -2.08
Trim56Q80VI1 Gm23817-201ENSMUST00000158449 104 ntBASIC2.08□□□□□ -2.08
Trim56Q80VI1 Gm23419-201ENSMUST00000175523 84 ntBASIC2.08□□□□□ -2.08
Trim56Q80VI1 Gm37579-201ENSMUST00000194291 142 ntBASIC2.08□□□□□ -2.08
Trim56Q80VI1 Mir30f-201ENSMUST00000196073 92 ntBASIC2.08□□□□□ -2.08
Trim56Q80VI1 Gm45654-201ENSMUST00000210980 123 ntBASIC2.08□□□□□ -2.08
Trim56Q80VI1 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.08□□□□□ -2.08
Trim56Q80VI1 AC140930.2-201ENSMUST00000221803 109 ntBASIC2.08□□□□□ -2.08
Trim56Q80VI1 Gm25851-201ENSMUST00000082794 107 ntBASIC2.08□□□□□ -2.08
Trim56Q80VI1 Snord80-201ENSMUST00000083801 81 ntBASIC2.08□□□□□ -2.08
Trim56Q80VI1 Gm26109-201ENSMUST00000083970 70 ntBASIC2.08□□□□□ -2.08
Trim56Q80VI1 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC2.08□□□□□ -2.08
Trim56Q80VI1 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Trim56Q80VI1 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC2.07□□□□□ -2.08
Trim56Q80VI1 Gm23289-201ENSMUST00000175615 108 ntBASIC2.07□□□□□ -2.08
Trim56Q80VI1 AC166341.8-201ENSMUST00000221267 108 ntBASIC2.07□□□□□ -2.08
Trim56Q80VI1 Gm23790-201ENSMUST00000083013 107 ntBASIC2.07□□□□□ -2.08
Trim56Q80VI1 Gm22494-201ENSMUST00000104495 128 ntBASIC2.06□□□□□ -2.08
Trim56Q80VI1 Gm25423-201ENSMUST00000157609 107 ntBASIC2.06□□□□□ -2.08
Trim56Q80VI1 Gm24401-201ENSMUST00000157868 91 ntBASIC2.06□□□□□ -2.08
Trim56Q80VI1 Gm22503-201ENSMUST00000158983 115 ntBASIC2.06□□□□□ -2.08
Trim56Q80VI1 Snord50a-201ENSMUST00000178154 72 ntBASIC2.06□□□□□ -2.08
Trim56Q80VI1 Gm24463-201ENSMUST00000178417 72 ntBASIC2.06□□□□□ -2.08
Trim56Q80VI1 Gm37778-201ENSMUST00000191732 190 ntBASIC2.06□□□□□ -2.08
Trim56Q80VI1 Gm43206-201ENSMUST00000197990 114 ntBASIC2.06□□□□□ -2.08
Trim56Q80VI1 AC159093.2-201ENSMUST00000227881 297 ntBASIC2.06□□□□□ -2.08
Trim56Q80VI1 Gm44560-201ENSMUST00000207816 3115 ntBASIC2.06□□□□□ -2.08
Trim56Q80VI1 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Trim56Q80VI1 Gm22729-201ENSMUST00000158088 129 ntBASIC2.05□□□□□ -2.08
Trim56Q80VI1 Gm25370-201ENSMUST00000158159 94 ntBASIC2.05□□□□□ -2.08
Trim56Q80VI1 Gm22914-201ENSMUST00000175195 77 ntBASIC2.05□□□□□ -2.08
Trim56Q80VI1 Mir7021-201ENSMUST00000197026 63 ntBASIC2.05□□□□□ -2.08
Trim56Q80VI1 AC153950.1-201ENSMUST00000219916 3238 ntBASIC2.04□□□□□ -2.08
Trim56Q80VI1 Gm15692-201ENSMUST00000152173 352 ntBASIC2.04□□□□□ -2.08
Trim56Q80VI1 Gm5900-201ENSMUST00000179862 375 ntBASIC2.04□□□□□ -2.08
Trim56Q80VI1 Mir7225-201ENSMUST00000184178 54 ntBASIC2.04□□□□□ -2.08
Trim56Q80VI1 Gm29535-201ENSMUST00000185723 109 ntBASIC2.04□□□□□ -2.08
Trim56Q80VI1 Gm28143-201ENSMUST00000191082 109 ntBASIC2.04□□□□□ -2.08
Trim56Q80VI1 Gm44408-201ENSMUST00000200205 66 ntBASIC2.04□□□□□ -2.08
Trim56Q80VI1 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Trim56Q80VI1 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trim56Q80VI1 Mir223-201ENSMUST00000102112 110 ntBASIC2.03□□□□□ -2.08
Trim56Q80VI1 Gm22761-201ENSMUST00000102278 96 ntBASIC2.03□□□□□ -2.08
Trim56Q80VI1 Gm23349-201ENSMUST00000158432 98 ntBASIC2.03□□□□□ -2.08
Trim56Q80VI1 Gm23813-201ENSMUST00000175153 77 ntBASIC2.03□□□□□ -2.08
Trim56Q80VI1 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.03□□□□□ -2.08
Trim56Q80VI1 Mir6369-201ENSMUST00000183772 106 ntBASIC2.03□□□□□ -2.08
Trim56Q80VI1 Trbv25-201ENSMUST00000194700 273 ntBASIC2.03□□□□□ -2.08
Trim56Q80VI1 AL772271.1-201ENSMUST00000196848 65 ntBASIC2.03□□□□□ -2.08
Trim56Q80VI1 Gm23299-201ENSMUST00000082708 79 ntBASIC2.03□□□□□ -2.08
Trim56Q80VI1 Snord14a-201ENSMUST00000082807 87 ntBASIC2.03□□□□□ -2.08
Trim56Q80VI1 Gm22770-201ENSMUST00000158368 67 ntBASIC2.02□□□□□ -2.09
Trim56Q80VI1 AC122769.2-201ENSMUST00000227248 302 ntBASIC2.02□□□□□ -2.09
Trim56Q80VI1 Gm26922-201ENSMUST00000082687 72 ntBASIC2.02□□□□□ -2.09
Trim56Q80VI1 Gm14039-201ENSMUST00000118705 101 ntBASIC2.01□□□□□ -2.09
Trim56Q80VI1 Gm25035-201ENSMUST00000175414 77 ntBASIC2.01□□□□□ -2.09
Trim56Q80VI1 Gm27898-201ENSMUST00000183987 80 ntBASIC2.01□□□□□ -2.09
Trim56Q80VI1 AC117232.1-201ENSMUST00000197964 119 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 157.6 ms