Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.54□□□□□ -2.32
Ccdc88cQ6VGS5 Mir468-201ENSMUST00000197332 78 ntBASIC0.54□□□□□ -2.32
Ccdc88cQ6VGS5 Gm44922-201ENSMUST00000206690 90 ntBASIC0.54□□□□□ -2.32
Ccdc88cQ6VGS5 Gm18213-201ENSMUST00000207850 178 ntBASIC0.54□□□□□ -2.32
Ccdc88cQ6VGS5 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.54□□□□□ -2.32
Ccdc88cQ6VGS5 Mir669b-201ENSMUST00000102172 97 ntBASIC0.53□□□□□ -2.32
Ccdc88cQ6VGS5 Snord32a-201ENSMUST00000083285 83 ntBASIC0.53□□□□□ -2.32
Ccdc88cQ6VGS5 Mir201-201ENSMUST00000083470 66 ntBASIC0.53□□□□□ -2.32
Ccdc88cQ6VGS5 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.53□□□□□ -2.33
Ccdc88cQ6VGS5 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
Ccdc88cQ6VGS5 Gm23990-201ENSMUST00000117031 117 ntBASIC0.52□□□□□ -2.33
Ccdc88cQ6VGS5 Mir92-2-201ENSMUST00000083679 91 ntBASIC0.52□□□□□ -2.33
Ccdc88cQ6VGS5 Gm23253-201ENSMUST00000157441 104 ntBASIC0.52□□□□□ -2.33
Ccdc88cQ6VGS5 Gm22079-201ENSMUST00000157592 106 ntBASIC0.52□□□□□ -2.33
Ccdc88cQ6VGS5 Gm24747-201ENSMUST00000157835 87 ntBASIC0.52□□□□□ -2.33
Ccdc88cQ6VGS5 Gm23567-201ENSMUST00000178005 107 ntBASIC0.52□□□□□ -2.33
Ccdc88cQ6VGS5 Mir7077-201ENSMUST00000183991 57 ntBASIC0.52□□□□□ -2.33
Ccdc88cQ6VGS5 Gm27365-201ENSMUST00000184041 177 ntBASIC0.52□□□□□ -2.33
Ccdc88cQ6VGS5 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
Ccdc88cQ6VGS5 Mir30f-201ENSMUST00000196073 92 ntBASIC0.52□□□□□ -2.33
Ccdc88cQ6VGS5 Gm44807-201ENSMUST00000206115 154 ntBASIC0.52□□□□□ -2.33
Ccdc88cQ6VGS5 Mir101a-201ENSMUST00000083517 83 ntBASIC0.52□□□□□ -2.33
Ccdc88cQ6VGS5 Gm24258-201ENSMUST00000083739 133 ntBASIC0.52□□□□□ -2.33
Ccdc88cQ6VGS5 Gm22786-201ENSMUST00000104086 122 ntBASIC0.51□□□□□ -2.33
Ccdc88cQ6VGS5 Gm24555-201ENSMUST00000104548 124 ntBASIC0.51□□□□□ -2.33
Ccdc88cQ6VGS5 Gm26084-201ENSMUST00000157903 104 ntBASIC0.51□□□□□ -2.33
Ccdc88cQ6VGS5 Gm23859-201ENSMUST00000158383 64 ntBASIC0.51□□□□□ -2.33
Ccdc88cQ6VGS5 Gm23180-201ENSMUST00000158686 125 ntBASIC0.51□□□□□ -2.33
Ccdc88cQ6VGS5 Gm22914-201ENSMUST00000175195 77 ntBASIC0.51□□□□□ -2.33
Ccdc88cQ6VGS5 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.51□□□□□ -2.33
Ccdc88cQ6VGS5 Gm23445-201ENSMUST00000082800 107 ntBASIC0.51□□□□□ -2.33
Ccdc88cQ6VGS5 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.51□□□□□ -2.33
Ccdc88cQ6VGS5 Snord90-201ENSMUST00000104568 111 ntBASIC0.5□□□□□ -2.33
Ccdc88cQ6VGS5 Gm26403-201ENSMUST00000158500 105 ntBASIC0.5□□□□□ -2.33
Ccdc88cQ6VGS5 Mir1966-201ENSMUST00000158807 108 ntBASIC0.5□□□□□ -2.33
Ccdc88cQ6VGS5 Mir3079-201ENSMUST00000175428 90 ntBASIC0.5□□□□□ -2.33
Ccdc88cQ6VGS5 Mir6364-201ENSMUST00000183396 86 ntBASIC0.5□□□□□ -2.33
Ccdc88cQ6VGS5 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.5□□□□□ -2.33
Ccdc88cQ6VGS5 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.5□□□□□ -2.33
Ccdc88cQ6VGS5 Gm23303-201ENSMUST00000082714 152 ntBASIC0.5□□□□□ -2.33
Ccdc88cQ6VGS5 Gm10172-201ENSMUST00000085929 558 ntBASIC0.5□□□□□ -2.33
Ccdc88cQ6VGS5 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
Ccdc88cQ6VGS5 Gm36956-201ENSMUST00000193830 214 ntBASIC0.5□□□□□ -2.33
Ccdc88cQ6VGS5 Gm22302-201ENSMUST00000082657 106 ntBASIC0.5□□□□□ -2.33
Ccdc88cQ6VGS5 Mir216a-201ENSMUST00000083605 72 ntBASIC0.5□□□□□ -2.33
Ccdc88cQ6VGS5 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.5□□□□□ -2.33
Ccdc88cQ6VGS5 Gm23947-201ENSMUST00000093636 107 ntBASIC0.5□□□□□ -2.33
Ccdc88cQ6VGS5 Gm24054-201ENSMUST00000158619 105 ntBASIC0.49□□□□□ -2.33
Ccdc88cQ6VGS5 Gm22801-201ENSMUST00000175624 84 ntBASIC0.49□□□□□ -2.33
Ccdc88cQ6VGS5 Gm44396-201ENSMUST00000199843 114 ntBASIC0.49□□□□□ -2.33
Ccdc88cQ6VGS5 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.49□□□□□ -2.33
Ccdc88cQ6VGS5 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.49□□□□□ -2.33
Ccdc88cQ6VGS5 Gm23278-201ENSMUST00000157911 143 ntBASIC0.48□□□□□ -2.33
Ccdc88cQ6VGS5 Gm17528-201ENSMUST00000171026 239 ntBASIC0.48□□□□□ -2.33
Ccdc88cQ6VGS5 Gm24020-201ENSMUST00000180156 108 ntBASIC0.48□□□□□ -2.33
Ccdc88cQ6VGS5 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
Ccdc88cQ6VGS5 Gm18502-201ENSMUST00000218679 199 ntBASIC0.48□□□□□ -2.33
Ccdc88cQ6VGS5 Gm24461-201ENSMUST00000082735 103 ntBASIC0.48□□□□□ -2.33
Ccdc88cQ6VGS5 Snord69-201ENSMUST00000104024 80 ntBASIC0.48□□□□□ -2.33
Ccdc88cQ6VGS5 Gm22105-201ENSMUST00000116734 116 ntBASIC0.48□□□□□ -2.33
Ccdc88cQ6VGS5 Gm25968-201ENSMUST00000157167 100 ntBASIC0.48□□□□□ -2.33
Ccdc88cQ6VGS5 Gm24728-201ENSMUST00000158226 125 ntBASIC0.48□□□□□ -2.33
Ccdc88cQ6VGS5 Gm24547-201ENSMUST00000158649 149 ntBASIC0.48□□□□□ -2.33
Ccdc88cQ6VGS5 Gm18665-201ENSMUST00000189783 270 ntBASIC0.48□□□□□ -2.33
Ccdc88cQ6VGS5 Gm45471-201ENSMUST00000211270 281 ntBASIC0.48□□□□□ -2.33
Ccdc88cQ6VGS5 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.48□□□□□ -2.33
Ccdc88cQ6VGS5 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.48□□□□□ -2.33
Ccdc88cQ6VGS5 Gm25081-201ENSMUST00000082534 108 ntBASIC0.48□□□□□ -2.33
Ccdc88cQ6VGS5 Snora41-201ENSMUST00000082668 132 ntBASIC0.48□□□□□ -2.33
Ccdc88cQ6VGS5 Mir30a-201ENSMUST00000083471 71 ntBASIC0.48□□□□□ -2.33
Ccdc88cQ6VGS5 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
Ccdc88cQ6VGS5 Gm26274-201ENSMUST00000157103 321 ntBASIC0.47□□□□□ -2.33
Ccdc88cQ6VGS5 Gm24250-201ENSMUST00000157320 135 ntBASIC0.47□□□□□ -2.33
Ccdc88cQ6VGS5 Gm25060-201ENSMUST00000157374 130 ntBASIC0.47□□□□□ -2.33
Ccdc88cQ6VGS5 Gm22606-201ENSMUST00000158290 103 ntBASIC0.47□□□□□ -2.33
Ccdc88cQ6VGS5 Gm16307-201ENSMUST00000161269 210 ntBASIC0.47□□□□□ -2.33
Ccdc88cQ6VGS5 Gm23770-201ENSMUST00000178009 108 ntBASIC0.47□□□□□ -2.33
Ccdc88cQ6VGS5 Gm22832-201ENSMUST00000178022 108 ntBASIC0.47□□□□□ -2.33
Ccdc88cQ6VGS5 Gm23863-201ENSMUST00000178265 108 ntBASIC0.47□□□□□ -2.33
Ccdc88cQ6VGS5 Gm24828-201ENSMUST00000178507 108 ntBASIC0.47□□□□□ -2.33
Ccdc88cQ6VGS5 Gm23052-201ENSMUST00000178633 108 ntBASIC0.47□□□□□ -2.33
Ccdc88cQ6VGS5 Gm25729-201ENSMUST00000179050 108 ntBASIC0.47□□□□□ -2.33
Ccdc88cQ6VGS5 Gm25359-201ENSMUST00000179315 108 ntBASIC0.47□□□□□ -2.33
Ccdc88cQ6VGS5 Gm22624-201ENSMUST00000179913 108 ntBASIC0.47□□□□□ -2.33
Ccdc88cQ6VGS5 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.47□□□□□ -2.33
Ccdc88cQ6VGS5 Gm25610-201ENSMUST00000104016 129 ntBASIC0.47□□□□□ -2.33
Ccdc88cQ6VGS5 Mir1197-201ENSMUST00000117037 120 ntBASIC0.47□□□□□ -2.33
Ccdc88cQ6VGS5 Gm25364-201ENSMUST00000158851 107 ntBASIC0.47□□□□□ -2.33
Ccdc88cQ6VGS5 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
Ccdc88cQ6VGS5 Gm24494-201ENSMUST00000083804 81 ntBASIC0.47□□□□□ -2.33
Ccdc88cQ6VGS5 Gm24232-201ENSMUST00000104314 132 ntBASIC0.46□□□□□ -2.34
Ccdc88cQ6VGS5 Gm24683-201ENSMUST00000104840 88 ntBASIC0.46□□□□□ -2.34
Ccdc88cQ6VGS5 Gm22815-201ENSMUST00000157451 62 ntBASIC0.46□□□□□ -2.34
Ccdc88cQ6VGS5 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.46□□□□□ -2.34
Ccdc88cQ6VGS5 Gm25138-201ENSMUST00000083248 136 ntBASIC0.46□□□□□ -2.34
Ccdc88cQ6VGS5 Mir532-201ENSMUST00000093630 96 ntBASIC0.46□□□□□ -2.34
Ccdc88cQ6VGS5 Gm10813-201ENSMUST00000099936 90 ntBASIC0.46□□□□□ -2.34
Ccdc88cQ6VGS5 Gm25915-201ENSMUST00000104265 126 ntBASIC0.45□□□□□ -2.34
Ccdc88cQ6VGS5 Gm25378-201ENSMUST00000104333 129 ntBASIC0.45□□□□□ -2.34
Ccdc88cQ6VGS5 Gm44489-201ENSMUST00000104619 97 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 130.3 ms