Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm22332-201ENSMUST00000158072 126 ntBASIC-1.08□□□□□ -2.58
Nup98Q6PFD9 Gm44395-201ENSMUST00000197056 153 ntBASIC-1.08□□□□□ -2.58
Nup98Q6PFD9 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC-1.09□□□□□ -2.58
Nup98Q6PFD9 Gm22157-201ENSMUST00000158410 104 ntBASIC-1.09□□□□□ -2.58
Nup98Q6PFD9 Mir6336-201ENSMUST00000183581 130 ntBASIC-1.09□□□□□ -2.58
Nup98Q6PFD9 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC-1.09□□□□□ -2.58
Nup98Q6PFD9 AC164297.5-201ENSMUST00000224365 198 ntBASIC-1.09□□□□□ -2.58
Nup98Q6PFD9 Gm23012-201ENSMUST00000104149 83 ntBASIC-1.1□□□□□ -2.59
Nup98Q6PFD9 Gm24714-201ENSMUST00000102382 101 ntBASIC-1.1□□□□□ -2.59
Nup98Q6PFD9 Gm27672-201ENSMUST00000183751 204 ntBASIC-1.1□□□□□ -2.59
Nup98Q6PFD9 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.1□□□□□ -2.59
Nup98Q6PFD9 Gm43927-201ENSMUST00000204599 117 ntBASIC-1.1□□□□□ -2.59
Nup98Q6PFD9 Gm22771-201ENSMUST00000104449 91 ntBASIC-1.11□□□□□ -2.59
Nup98Q6PFD9 Gm23212-201ENSMUST00000122718 60 ntBASIC-1.11□□□□□ -2.59
Nup98Q6PFD9 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC-1.11□□□□□ -2.59
Nup98Q6PFD9 Gm27297-201ENSMUST00000183395 105 ntBASIC-1.11□□□□□ -2.59
Nup98Q6PFD9 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.11□□□□□ -2.59
Nup98Q6PFD9 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC-1.11□□□□□ -2.59
Nup98Q6PFD9 AC116589.4-201ENSMUST00000222390 216 ntBASIC-1.11□□□□□ -2.59
Nup98Q6PFD9 Gm11407-201ENSMUST00000120362 1058 ntBASIC-1.12□□□□□ -2.59
Nup98Q6PFD9 Gm24250-201ENSMUST00000157320 135 ntBASIC-1.12□□□□□ -2.59
Nup98Q6PFD9 Gm28849-201ENSMUST00000188127 174 ntBASIC-1.12□□□□□ -2.59
Nup98Q6PFD9 AL929265.1-201ENSMUST00000213427 125 ntBASIC-1.12□□□□□ -2.59
Nup98Q6PFD9 Gm23191-201ENSMUST00000179147 107 ntBASIC-1.12□□□□□ -2.59
Nup98Q6PFD9 Mir7057-201ENSMUST00000184685 58 ntBASIC-1.12□□□□□ -2.59
Nup98Q6PFD9 Mir7657-201ENSMUST00000196051 57 ntBASIC-1.12□□□□□ -2.59
Nup98Q6PFD9 Gm42622-201ENSMUST00000197229 355 ntBASIC-1.12□□□□□ -2.59
Nup98Q6PFD9 Gm45402-201ENSMUST00000211796 223 ntBASIC-1.12□□□□□ -2.59
Nup98Q6PFD9 Gm22542-201ENSMUST00000158166 95 ntBASIC-1.13□□□□□ -2.59
Nup98Q6PFD9 Gm23474-201ENSMUST00000158884 75 ntBASIC-1.13□□□□□ -2.59
Nup98Q6PFD9 Gm24453-201ENSMUST00000083346 76 ntBASIC-1.13□□□□□ -2.59
Nup98Q6PFD9 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-1.14□□□□□ -2.59
Nup98Q6PFD9 Mir1191-201ENSMUST00000116883 120 ntBASIC-1.14□□□□□ -2.59
Nup98Q6PFD9 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC-1.14□□□□□ -2.59
Nup98Q6PFD9 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC-1.14□□□□□ -2.59
Nup98Q6PFD9 Gm26400-201ENSMUST00000175012 85 ntBASIC-1.14□□□□□ -2.59
Nup98Q6PFD9 Mir376a-201ENSMUST00000197584 68 ntBASIC-1.14□□□□□ -2.59
Nup98Q6PFD9 AC132918.1-201ENSMUST00000227877 925 ntBASIC-1.14□□□□□ -2.59
Nup98Q6PFD9 Gm25848-201ENSMUST00000116790 144 ntBASIC-1.15□□□□□ -2.59
Nup98Q6PFD9 Gm13345-201ENSMUST00000121928 228 ntBASIC-1.15□□□□□ -2.59
Nup98Q6PFD9 Gm27919-201ENSMUST00000185163 107 ntBASIC-1.15□□□□□ -2.59
Nup98Q6PFD9 Gm23627-201ENSMUST00000082459 107 ntBASIC-1.15□□□□□ -2.59
Nup98Q6PFD9 n-R5s94-201ENSMUST00000082573 119 ntBASIC-1.15□□□□□ -2.59
Nup98Q6PFD9 Gm23982-201ENSMUST00000157141 106 ntBASIC-1.15□□□□□ -2.59
Nup98Q6PFD9 Gm22433-201ENSMUST00000158550 142 ntBASIC-1.15□□□□□ -2.59
Nup98Q6PFD9 Gm25771-201ENSMUST00000158565 144 ntBASIC-1.15□□□□□ -2.59
Nup98Q6PFD9 Gm26062-201ENSMUST00000083379 107 ntBASIC-1.15□□□□□ -2.59
Nup98Q6PFD9 Gm25769-201ENSMUST00000158569 127 ntBASIC-1.16□□□□□ -2.6
Nup98Q6PFD9 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.16□□□□□ -2.6
Nup98Q6PFD9 Gm28648-201ENSMUST00000190092 343 ntBASIC-1.16□□□□□ -2.6
Nup98Q6PFD9 Gm42795-201ENSMUST00000198847 76 ntBASIC-1.16□□□□□ -2.6
Nup98Q6PFD9 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC-1.16□□□□□ -2.6
Nup98Q6PFD9 Snord42b-201ENSMUST00000083742 69 ntBASIC-1.16□□□□□ -2.6
Nup98Q6PFD9 Gm25974-201ENSMUST00000158701 94 ntBASIC-1.17□□□□□ -2.6
Nup98Q6PFD9 Gm26180-201ENSMUST00000179942 107 ntBASIC-1.17□□□□□ -2.6
Nup98Q6PFD9 Gm5002-201ENSMUST00000207145 223 ntBASIC-1.17□□□□□ -2.6
Nup98Q6PFD9 AC158982.2-201ENSMUST00000226283 184 ntBASIC-1.17□□□□□ -2.6
Nup98Q6PFD9 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-1.17□□□□□ -2.6
Nup98Q6PFD9 mt-Tw-201ENSMUST00000082397 67 ntBASIC-1.17□□□□□ -2.6
Nup98Q6PFD9 Gm12647-201ENSMUST00000118977 265 ntBASIC-1.17□□□□□ -2.6
Nup98Q6PFD9 Gm14574-201ENSMUST00000120644 279 ntBASIC-1.17□□□□□ -2.6
Nup98Q6PFD9 Gm22686-201ENSMUST00000082847 100 ntBASIC-1.17□□□□□ -2.6
Nup98Q6PFD9 Mir302c-201ENSMUST00000083548 68 ntBASIC-1.17□□□□□ -2.6
Nup98Q6PFD9 Gm12584-201ENSMUST00000117109 1105 ntBASIC-1.18□□□□□ -2.6
Nup98Q6PFD9 Snora19-201ENSMUST00000082962 132 ntBASIC-1.18□□□□□ -2.6
Nup98Q6PFD9 Gm23658-201ENSMUST00000083233 132 ntBASIC-1.18□□□□□ -2.6
Nup98Q6PFD9 Mir463-201ENSMUST00000093570 75 ntBASIC-1.18□□□□□ -2.6
Nup98Q6PFD9 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-1.18□□□□□ -2.6
Nup98Q6PFD9 Mir216b-201ENSMUST00000102363 86 ntBASIC-1.19□□□□□ -2.6
Nup98Q6PFD9 Gm22788-201ENSMUST00000157876 61 ntBASIC-1.19□□□□□ -2.6
Nup98Q6PFD9 Gm27957-201ENSMUST00000184054 127 ntBASIC-1.19□□□□□ -2.6
Nup98Q6PFD9 Mir3535-201ENSMUST00000197651 147 ntBASIC-1.19□□□□□ -2.6
Nup98Q6PFD9 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-1.19□□□□□ -2.6
Nup98Q6PFD9 Gm24241-201ENSMUST00000157787 145 ntBASIC-1.19□□□□□ -2.6
Nup98Q6PFD9 Gm24073-201ENSMUST00000158177 106 ntBASIC-1.19□□□□□ -2.6
Nup98Q6PFD9 Gm23199-201ENSMUST00000158812 107 ntBASIC-1.19□□□□□ -2.6
Nup98Q6PFD9 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-1.19□□□□□ -2.6
Nup98Q6PFD9 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-1.19□□□□□ -2.6
Nup98Q6PFD9 Mir496a-201ENSMUST00000093627 79 ntBASIC-1.19□□□□□ -2.6
Nup98Q6PFD9 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-1.19□□□□□ -2.6
Nup98Q6PFD9 Gm23640-201ENSMUST00000157860 104 ntBASIC-1.2□□□□□ -2.6
Nup98Q6PFD9 Gm19248-201ENSMUST00000209404 110 ntBASIC-1.2□□□□□ -2.6
Nup98Q6PFD9 AC116589.1-201ENSMUST00000220634 327 ntBASIC-1.2□□□□□ -2.6
Nup98Q6PFD9 Gm25142-201ENSMUST00000082698 107 ntBASIC-1.2□□□□□ -2.6
Nup98Q6PFD9 Gm24336-201ENSMUST00000104203 146 ntBASIC-1.21□□□□□ -2.6
Nup98Q6PFD9 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC-1.21□□□□□ -2.6
Nup98Q6PFD9 Gm23421-201ENSMUST00000158934 104 ntBASIC-1.21□□□□□ -2.6
Nup98Q6PFD9 Gm27749-201ENSMUST00000183651 125 ntBASIC-1.21□□□□□ -2.6
Nup98Q6PFD9 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC-1.22□□□□□ -2.6
Nup98Q6PFD9 Gm23654-201ENSMUST00000116758 126 ntBASIC-1.22□□□□□ -2.6
Nup98Q6PFD9 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.22□□□□□ -2.6
Nup98Q6PFD9 Gm25629-201ENSMUST00000084001 107 ntBASIC-1.22□□□□□ -2.6
Nup98Q6PFD9 Gm24377-201ENSMUST00000104398 131 ntBASIC-1.22□□□□□ -2.61
Nup98Q6PFD9 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC-1.22□□□□□ -2.61
Nup98Q6PFD9 Gm23655-201ENSMUST00000122627 105 ntBASIC-1.22□□□□□ -2.61
Nup98Q6PFD9 Gm23097-201ENSMUST00000083448 105 ntBASIC-1.22□□□□□ -2.61
Nup98Q6PFD9 Mir20b-201ENSMUST00000102087 80 ntBASIC-1.23□□□□□ -2.61
Nup98Q6PFD9 Gm22732-201ENSMUST00000158093 121 ntBASIC-1.23□□□□□ -2.61
Nup98Q6PFD9 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-1.23□□□□□ -2.61
Nup98Q6PFD9 Gm22791-201ENSMUST00000157232 145 ntBASIC-1.24□□□□□ -2.61
Retrieved 100 of 76,532 protein–RNA pairs in 180.7 ms