Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
Sh3rf1Q69ZI1 Gm25011-201ENSMUST00000158398 126 ntBASIC2.22□□□□□ -2.05
Sh3rf1Q69ZI1 Gm16307-201ENSMUST00000161269 210 ntBASIC2.22□□□□□ -2.05
Sh3rf1Q69ZI1 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Sh3rf1Q69ZI1 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC2.22□□□□□ -2.05
Sh3rf1Q69ZI1 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.22□□□□□ -2.05
Sh3rf1Q69ZI1 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Sh3rf1Q69ZI1 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Sh3rf1Q69ZI1 Snora3-201ENSMUST00000083082 132 ntBASIC2.21□□□□□ -2.06
Sh3rf1Q69ZI1 Mir322-201ENSMUST00000083484 95 ntBASIC2.21□□□□□ -2.06
Sh3rf1Q69ZI1 Gm23344-201ENSMUST00000083818 68 ntBASIC2.21□□□□□ -2.06
Sh3rf1Q69ZI1 Gm23826-201ENSMUST00000157394 119 ntBASIC2.2□□□□□ -2.06
Sh3rf1Q69ZI1 Gm16561-201ENSMUST00000163001 192 ntBASIC2.2□□□□□ -2.06
Sh3rf1Q69ZI1 Gm20477-201ENSMUST00000174028 280 ntBASIC2.2□□□□□ -2.06
Sh3rf1Q69ZI1 Mir3569-201ENSMUST00000185080 58 ntBASIC2.2□□□□□ -2.06
Sh3rf1Q69ZI1 AC122335.1-201ENSMUST00000217587 175 ntBASIC2.2□□□□□ -2.06
Sh3rf1Q69ZI1 Gm7214-201ENSMUST00000222428 272 ntBASIC2.2□□□□□ -2.06
Sh3rf1Q69ZI1 Gm25402-201ENSMUST00000082966 131 ntBASIC2.2□□□□□ -2.06
Sh3rf1Q69ZI1 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
Sh3rf1Q69ZI1 Gm25044-201ENSMUST00000158603 104 ntBASIC2.19□□□□□ -2.06
Sh3rf1Q69ZI1 Gm25618-201ENSMUST00000179484 107 ntBASIC2.19□□□□□ -2.06
Sh3rf1Q69ZI1 Mir6997-201ENSMUST00000184313 71 ntBASIC2.19□□□□□ -2.06
Sh3rf1Q69ZI1 Mir7226-201ENSMUST00000184953 60 ntBASIC2.19□□□□□ -2.06
Sh3rf1Q69ZI1 Gm25854-201ENSMUST00000082792 72 ntBASIC2.19□□□□□ -2.06
Sh3rf1Q69ZI1 Mir410-201ENSMUST00000083563 81 ntBASIC2.19□□□□□ -2.06
Sh3rf1Q69ZI1 Gm25542-201ENSMUST00000116889 94 ntBASIC2.18□□□□□ -2.06
Sh3rf1Q69ZI1 Gm22205-201ENSMUST00000122655 71 ntBASIC2.18□□□□□ -2.06
Sh3rf1Q69ZI1 Gm25740-201ENSMUST00000180247 107 ntBASIC2.18□□□□□ -2.06
Sh3rf1Q69ZI1 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC2.18□□□□□ -2.06
Sh3rf1Q69ZI1 Gm23377-201ENSMUST00000082943 126 ntBASIC2.18□□□□□ -2.06
Sh3rf1Q69ZI1 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Sh3rf1Q69ZI1 Gm12941-201ENSMUST00000117934 220 ntBASIC2.17□□□□□ -2.06
Sh3rf1Q69ZI1 Gm11333-201ENSMUST00000119479 148 ntBASIC2.17□□□□□ -2.06
Sh3rf1Q69ZI1 Gm26398-201ENSMUST00000179015 127 ntBASIC2.17□□□□□ -2.06
Sh3rf1Q69ZI1 Mir30f-201ENSMUST00000196073 92 ntBASIC2.17□□□□□ -2.06
Sh3rf1Q69ZI1 AC069074.1-201ENSMUST00000220048 381 ntBASIC2.17□□□□□ -2.06
Sh3rf1Q69ZI1 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.17□□□□□ -2.06
Sh3rf1Q69ZI1 Gm25899-201ENSMUST00000082672 141 ntBASIC2.17□□□□□ -2.06
Sh3rf1Q69ZI1 Gm22884-201ENSMUST00000083127 140 ntBASIC2.17□□□□□ -2.06
Sh3rf1Q69ZI1 Mir30d-201ENSMUST00000083503 82 ntBASIC2.17□□□□□ -2.06
Sh3rf1Q69ZI1 Gm24183-201ENSMUST00000122572 93 ntBASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Gm25354-201ENSMUST00000179110 105 ntBASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Gm25635-201ENSMUST00000082675 131 ntBASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Gm25788-201ENSMUST00000082721 131 ntBASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Mir300-201ENSMUST00000083485 79 ntBASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Mir222-201ENSMUST00000083537 79 ntBASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Gm23528-201ENSMUST00000104571 132 ntBASIC2.15□□□□□ -2.07
Sh3rf1Q69ZI1 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC2.15□□□□□ -2.07
Sh3rf1Q69ZI1 Gm26478-201ENSMUST00000122611 133 ntBASIC2.15□□□□□ -2.07
Sh3rf1Q69ZI1 Gm16539-201ENSMUST00000160086 327 ntBASIC2.15□□□□□ -2.07
Sh3rf1Q69ZI1 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.15□□□□□ -2.07
Sh3rf1Q69ZI1 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.15□□□□□ -2.07
Sh3rf1Q69ZI1 mt-Tl2-201ENSMUST00000082417 71 ntBASIC2.15□□□□□ -2.07
Sh3rf1Q69ZI1 Mir5117-201ENSMUST00000083226 84 ntBASIC2.15□□□□□ -2.07
Sh3rf1Q69ZI1 Gm26062-201ENSMUST00000083379 107 ntBASIC2.15□□□□□ -2.07
Sh3rf1Q69ZI1 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
Sh3rf1Q69ZI1 Mir20b-201ENSMUST00000102087 80 ntBASIC2.14□□□□□ -2.07
Sh3rf1Q69ZI1 Gm23203-201ENSMUST00000104374 107 ntBASIC2.14□□□□□ -2.07
Sh3rf1Q69ZI1 Gm24384-201ENSMUST00000122693 75 ntBASIC2.14□□□□□ -2.07
Sh3rf1Q69ZI1 Gm24064-201ENSMUST00000157486 106 ntBASIC2.14□□□□□ -2.07
Sh3rf1Q69ZI1 Gm22539-201ENSMUST00000158167 117 ntBASIC2.14□□□□□ -2.07
Sh3rf1Q69ZI1 Gm26290-201ENSMUST00000158891 145 ntBASIC2.14□□□□□ -2.07
Sh3rf1Q69ZI1 Gm25949-201ENSMUST00000175333 114 ntBASIC2.14□□□□□ -2.07
Sh3rf1Q69ZI1 Mir6406-201ENSMUST00000183592 120 ntBASIC2.14□□□□□ -2.07
Sh3rf1Q69ZI1 Mir6369-201ENSMUST00000183772 106 ntBASIC2.14□□□□□ -2.07
Sh3rf1Q69ZI1 Gm3724-201ENSMUST00000197957 349 ntBASIC2.14□□□□□ -2.07
Sh3rf1Q69ZI1 Gm24412-201ENSMUST00000083426 109 ntBASIC2.14□□□□□ -2.07
Sh3rf1Q69ZI1 Mir221-201ENSMUST00000083488 95 ntBASIC2.14□□□□□ -2.07
Sh3rf1Q69ZI1 Gm24523-201ENSMUST00000083965 132 ntBASIC2.14□□□□□ -2.07
Sh3rf1Q69ZI1 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Sh3rf1Q69ZI1 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.13□□□□□ -2.07
Sh3rf1Q69ZI1 Gm25094-201ENSMUST00000103992 131 ntBASIC2.13□□□□□ -2.07
Sh3rf1Q69ZI1 Gm14884-201ENSMUST00000120456 196 ntBASIC2.13□□□□□ -2.07
Sh3rf1Q69ZI1 Gm23469-201ENSMUST00000157131 104 ntBASIC2.13□□□□□ -2.07
Sh3rf1Q69ZI1 Gm22159-201ENSMUST00000158412 130 ntBASIC2.13□□□□□ -2.07
Sh3rf1Q69ZI1 Mir3086-201ENSMUST00000175072 87 ntBASIC2.13□□□□□ -2.07
Sh3rf1Q69ZI1 Gm24575-201ENSMUST00000175502 77 ntBASIC2.13□□□□□ -2.07
Sh3rf1Q69ZI1 Gm24162-201ENSMUST00000093665 102 ntBASIC2.13□□□□□ -2.07
Sh3rf1Q69ZI1 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Sh3rf1Q69ZI1 Gm23950-201ENSMUST00000104026 129 ntBASIC2.12□□□□□ -2.07
Sh3rf1Q69ZI1 Gm22803-201ENSMUST00000158049 283 ntBASIC2.12□□□□□ -2.07
Sh3rf1Q69ZI1 Gm24900-201ENSMUST00000158128 134 ntBASIC2.12□□□□□ -2.07
Sh3rf1Q69ZI1 Gm22093-201ENSMUST00000158980 111 ntBASIC2.12□□□□□ -2.07
Sh3rf1Q69ZI1 Gm24495-201ENSMUST00000178575 79 ntBASIC2.12□□□□□ -2.07
Sh3rf1Q69ZI1 Gm22253-201ENSMUST00000179870 79 ntBASIC2.12□□□□□ -2.07
Sh3rf1Q69ZI1 Gm27979-201ENSMUST00000185126 56 ntBASIC2.12□□□□□ -2.07
Sh3rf1Q69ZI1 AC141438.3-201ENSMUST00000215632 202 ntBASIC2.12□□□□□ -2.07
Sh3rf1Q69ZI1 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 256.8 ms