Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.07□□□□□ -2.08
Trim28Q62318 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Trim28Q62318 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.06□□□□□ -2.08
Trim28Q62318 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Trim28Q62318 Gm22672-201ENSMUST00000104414 134 ntBASIC2.06□□□□□ -2.08
Trim28Q62318 Gm15115-201ENSMUST00000121145 264 ntBASIC2.06□□□□□ -2.08
Trim28Q62318 Gm23838-201ENSMUST00000158067 162 ntBASIC2.06□□□□□ -2.08
Trim28Q62318 Gm23181-201ENSMUST00000158685 110 ntBASIC2.06□□□□□ -2.08
Trim28Q62318 Gm25976-201ENSMUST00000158695 130 ntBASIC2.06□□□□□ -2.08
Trim28Q62318 Gm25831-201ENSMUST00000158924 163 ntBASIC2.06□□□□□ -2.08
Trim28Q62318 Gm25636-201ENSMUST00000082666 133 ntBASIC2.06□□□□□ -2.08
Trim28Q62318 Snora20-201ENSMUST00000082703 128 ntBASIC2.06□□□□□ -2.08
Trim28Q62318 Gm24038-201ENSMUST00000082872 159 ntBASIC2.06□□□□□ -2.08
Trim28Q62318 Gm24412-201ENSMUST00000083426 109 ntBASIC2.06□□□□□ -2.08
Trim28Q62318 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.06□□□□□ -2.08
Trim28Q62318 Gm12309-201ENSMUST00000119889 182 ntBASIC2.05□□□□□ -2.08
Trim28Q62318 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.05□□□□□ -2.08
Trim28Q62318 Gm27365-201ENSMUST00000184041 177 ntBASIC2.05□□□□□ -2.08
Trim28Q62318 AC132833.2-201ENSMUST00000228699 157 ntBASIC2.05□□□□□ -2.08
Trim28Q62318 Mir1a-1-201ENSMUST00000093635 77 ntBASIC2.05□□□□□ -2.08
Trim28Q62318 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trim28Q62318 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Trim28Q62318 Gm23468-201ENSMUST00000157125 108 ntBASIC2.04□□□□□ -2.08
Trim28Q62318 Gm23469-201ENSMUST00000157131 104 ntBASIC2.04□□□□□ -2.08
Trim28Q62318 Gm22706-201ENSMUST00000157907 112 ntBASIC2.04□□□□□ -2.08
Trim28Q62318 Gm24902-201ENSMUST00000158126 123 ntBASIC2.04□□□□□ -2.08
Trim28Q62318 Gm23854-201ENSMUST00000158378 108 ntBASIC2.04□□□□□ -2.08
Trim28Q62318 Gm25449-201ENSMUST00000179389 79 ntBASIC2.04□□□□□ -2.08
Trim28Q62318 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.04□□□□□ -2.08
Trim28Q62318 Gm27511-201ENSMUST00000183502 127 ntBASIC2.04□□□□□ -2.08
Trim28Q62318 Gm24151-201ENSMUST00000082758 141 ntBASIC2.04□□□□□ -2.08
Trim28Q62318 Mir490-201ENSMUST00000093567 84 ntBASIC2.04□□□□□ -2.08
Trim28Q62318 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trim28Q62318 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trim28Q62318 Gm22494-201ENSMUST00000104495 128 ntBASIC2.03□□□□□ -2.08
Trim28Q62318 Gm23986-201ENSMUST00000157144 63 ntBASIC2.03□□□□□ -2.08
Trim28Q62318 Gm23715-201ENSMUST00000157354 106 ntBASIC2.03□□□□□ -2.08
Trim28Q62318 Gm26004-201ENSMUST00000158804 116 ntBASIC2.03□□□□□ -2.08
Trim28Q62318 Gm23917-201ENSMUST00000175256 98 ntBASIC2.03□□□□□ -2.08
Trim28Q62318 Gm19855-201ENSMUST00000210145 249 ntBASIC2.03□□□□□ -2.08
Trim28Q62318 Gm24203-201ENSMUST00000082949 114 ntBASIC2.03□□□□□ -2.08
Trim28Q62318 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Trim28Q62318 Gm23601-201ENSMUST00000157259 131 ntBASIC2.02□□□□□ -2.09
Trim28Q62318 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC2.02□□□□□ -2.09
Trim28Q62318 Gm45471-201ENSMUST00000211270 281 ntBASIC2.02□□□□□ -2.09
Trim28Q62318 Snord80-201ENSMUST00000083801 81 ntBASIC2.02□□□□□ -2.09
Trim28Q62318 Gm26109-201ENSMUST00000083970 70 ntBASIC2.02□□□□□ -2.09
Trim28Q62318 Gm25329-201ENSMUST00000158041 126 ntBASIC2.01□□□□□ -2.09
Trim28Q62318 Gm24000-201ENSMUST00000158063 89 ntBASIC2.01□□□□□ -2.09
Trim28Q62318 Gm24637-201ENSMUST00000158674 85 ntBASIC2.01□□□□□ -2.09
Trim28Q62318 Gm22503-201ENSMUST00000158983 115 ntBASIC2.01□□□□□ -2.09
Trim28Q62318 Mir21c-201ENSMUST00000184910 78 ntBASIC2.01□□□□□ -2.09
Trim28Q62318 AL928567.1-201ENSMUST00000197891 138 ntBASIC2.01□□□□□ -2.09
Trim28Q62318 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trim28Q62318 Gm15692-201ENSMUST00000152173 352 ntBASIC2□□□□□ -2.09
Trim28Q62318 U6.1-201ENSMUST00000157443 101 ntBASIC2□□□□□ -2.09
Trim28Q62318 Gm24674-201ENSMUST00000179194 104 ntBASIC2□□□□□ -2.09
Trim28Q62318 Mir6237-201ENSMUST00000183808 91 ntBASIC2□□□□□ -2.09
Trim28Q62318 Gm23370-201ENSMUST00000199545 130 ntBASIC2□□□□□ -2.09
Trim28Q62318 AC140930.2-201ENSMUST00000221803 109 ntBASIC2□□□□□ -2.09
Trim28Q62318 AC129202.1-201ENSMUST00000224895 526 ntBASIC2□□□□□ -2.09
Trim28Q62318 Mir802-201ENSMUST00000103258 97 ntBASIC1.99□□□□□ -2.09
Trim28Q62318 Gm24593-201ENSMUST00000122507 106 ntBASIC1.99□□□□□ -2.09
Trim28Q62318 Gm23390-201ENSMUST00000157393 106 ntBASIC1.99□□□□□ -2.09
Trim28Q62318 Gm22888-201ENSMUST00000158640 77 ntBASIC1.99□□□□□ -2.09
Trim28Q62318 Gm24668-201ENSMUST00000158935 104 ntBASIC1.99□□□□□ -2.09
Trim28Q62318 Gm27415-201ENSMUST00000183720 95 ntBASIC1.99□□□□□ -2.09
Trim28Q62318 Mir6351-201ENSMUST00000183826 99 ntBASIC1.99□□□□□ -2.09
Trim28Q62318 Gm45268-201ENSMUST00000210046 370 ntBASIC1.99□□□□□ -2.09
Trim28Q62318 Gm23293-201ENSMUST00000082552 104 ntBASIC1.99□□□□□ -2.09
Trim28Q62318 Gm22743-201ENSMUST00000083445 133 ntBASIC1.99□□□□□ -2.09
Trim28Q62318 Mir451a-201ENSMUST00000093557 72 ntBASIC1.99□□□□□ -2.09
Trim28Q62318 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.98□□□□□ -2.09
Trim28Q62318 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.98□□□□□ -2.09
Trim28Q62318 Gm22605-201ENSMUST00000158289 108 ntBASIC1.98□□□□□ -2.09
Trim28Q62318 Gm22089-201ENSMUST00000158336 102 ntBASIC1.98□□□□□ -2.09
Trim28Q62318 Gm25958-201ENSMUST00000175114 71 ntBASIC1.98□□□□□ -2.09
Trim28Q62318 Gm25820-201ENSMUST00000198589 127 ntBASIC1.98□□□□□ -2.09
Trim28Q62318 Gm23237-201ENSMUST00000104639 92 ntBASIC1.97□□□□□ -2.09
Trim28Q62318 Gm24183-201ENSMUST00000122572 93 ntBASIC1.97□□□□□ -2.09
Trim28Q62318 Gm23558-201ENSMUST00000157823 80 ntBASIC1.97□□□□□ -2.09
Trim28Q62318 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.97□□□□□ -2.09
Trim28Q62318 Gm11856-201ENSMUST00000118712 276 ntBASIC1.96□□□□□ -2.1
Trim28Q62318 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.96□□□□□ -2.1
Trim28Q62318 Gm26090-201ENSMUST00000157897 128 ntBASIC1.96□□□□□ -2.1
Trim28Q62318 Snord87-201ENSMUST00000175437 87 ntBASIC1.96□□□□□ -2.1
Trim28Q62318 Gm27493-201ENSMUST00000184128 78 ntBASIC1.96□□□□□ -2.1
Trim28Q62318 Mir30c-2-201ENSMUST00000083633 84 ntBASIC1.96□□□□□ -2.1
Trim28Q62318 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.95□□□□□ -2.1
Trim28Q62318 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Trim28Q62318 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Trim28Q62318 Gm23766-201ENSMUST00000103894 80 ntBASIC1.95□□□□□ -2.1
Trim28Q62318 Gm25611-201ENSMUST00000104017 133 ntBASIC1.95□□□□□ -2.1
Trim28Q62318 Gm20391-201ENSMUST00000174722 106 ntBASIC1.95□□□□□ -2.1
Trim28Q62318 Gm44807-201ENSMUST00000206115 154 ntBASIC1.95□□□□□ -2.1
Trim28Q62318 Gm25899-201ENSMUST00000082672 141 ntBASIC1.95□□□□□ -2.1
Trim28Q62318 Gm23056-201ENSMUST00000082803 111 ntBASIC1.95□□□□□ -2.1
Trim28Q62318 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.94□□□□□ -2.1
Trim28Q62318 Mir3096-201ENSMUST00000116685 71 ntBASIC1.94□□□□□ -2.1
Trim28Q62318 Gm23172-201ENSMUST00000157160 124 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 167.9 ms