Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Gm22079-201ENSMUST00000157592 106 ntBASIC0.27□□□□□ -2.37
Trav6-2Q5R1I4 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.27□□□□□ -2.37
Trav6-2Q5R1I4 Gm43944-201ENSMUST00000205220 120 ntBASIC0.27□□□□□ -2.37
Trav6-2Q5R1I4 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.26□□□□□ -2.37
Trav6-2Q5R1I4 Gm22815-201ENSMUST00000157451 62 ntBASIC0.26□□□□□ -2.37
Trav6-2Q5R1I4 Gm23080-201ENSMUST00000157846 103 ntBASIC0.26□□□□□ -2.37
Trav6-2Q5R1I4 Gm22946-201ENSMUST00000158558 82 ntBASIC0.26□□□□□ -2.37
Trav6-2Q5R1I4 Gm25300-201ENSMUST00000175284 84 ntBASIC0.26□□□□□ -2.37
Trav6-2Q5R1I4 Mir7010-201ENSMUST00000183464 63 ntBASIC0.26□□□□□ -2.37
Trav6-2Q5R1I4 Gm37586-201ENSMUST00000193654 204 ntBASIC0.26□□□□□ -2.37
Trav6-2Q5R1I4 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
Trav6-2Q5R1I4 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.26□□□□□ -2.37
Trav6-2Q5R1I4 Mir377-201ENSMUST00000083504 68 ntBASIC0.26□□□□□ -2.37
Trav6-2Q5R1I4 Gm23881-201ENSMUST00000116872 66 ntBASIC0.25□□□□□ -2.37
Trav6-2Q5R1I4 Gm15654-201ENSMUST00000152660 300 ntBASIC0.25□□□□□ -2.37
Trav6-2Q5R1I4 Gm22520-201ENSMUST00000158269 129 ntBASIC0.25□□□□□ -2.37
Trav6-2Q5R1I4 Gm22983-201ENSMUST00000158308 104 ntBASIC0.25□□□□□ -2.37
Trav6-2Q5R1I4 Gm23917-201ENSMUST00000175256 98 ntBASIC0.25□□□□□ -2.37
Trav6-2Q5R1I4 Gm27993-201ENSMUST00000184362 85 ntBASIC0.25□□□□□ -2.37
Trav6-2Q5R1I4 Gm37116-201ENSMUST00000195161 147 ntBASIC0.25□□□□□ -2.37
Trav6-2Q5R1I4 Mir721-201ENSMUST00000200230 88 ntBASIC0.25□□□□□ -2.37
Trav6-2Q5R1I4 Gm45541-201ENSMUST00000210443 54 ntBASIC0.25□□□□□ -2.37
Trav6-2Q5R1I4 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.25□□□□□ -2.37
Trav6-2Q5R1I4 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Trav6-2Q5R1I4 Snord82-201ENSMUST00000082889 70 ntBASIC0.25□□□□□ -2.37
Trav6-2Q5R1I4 Gm24522-201ENSMUST00000083964 108 ntBASIC0.25□□□□□ -2.37
Trav6-2Q5R1I4 Gm26156-201ENSMUST00000116999 123 ntBASIC0.24□□□□□ -2.37
Trav6-2Q5R1I4 Gm26152-201ENSMUST00000157427 101 ntBASIC0.24□□□□□ -2.37
Trav6-2Q5R1I4 Gm23901-201ENSMUST00000157570 107 ntBASIC0.24□□□□□ -2.37
Trav6-2Q5R1I4 Gm22476-201ENSMUST00000158902 100 ntBASIC0.24□□□□□ -2.37
Trav6-2Q5R1I4 Gm10548-202ENSMUST00000165672 272 ntBASIC0.24□□□□□ -2.37
Trav6-2Q5R1I4 Gm24575-201ENSMUST00000175502 77 ntBASIC0.24□□□□□ -2.37
Trav6-2Q5R1I4 Gm37330-201ENSMUST00000192606 153 ntBASIC0.24□□□□□ -2.37
Trav6-2Q5R1I4 Mir30f-201ENSMUST00000196073 92 ntBASIC0.24□□□□□ -2.37
Trav6-2Q5R1I4 Mir6896-201ENSMUST00000198033 73 ntBASIC0.24□□□□□ -2.37
Trav6-2Q5R1I4 Gm44807-201ENSMUST00000206115 154 ntBASIC0.24□□□□□ -2.37
Trav6-2Q5R1I4 Gm5002-201ENSMUST00000207145 223 ntBASIC0.24□□□□□ -2.37
Trav6-2Q5R1I4 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.23□□□□□ -2.37
Trav6-2Q5R1I4 Gm20409-201ENSMUST00000173457 130 ntBASIC0.23□□□□□ -2.37
Trav6-2Q5R1I4 Mir100-201ENSMUST00000175270 80 ntBASIC0.23□□□□□ -2.37
Trav6-2Q5R1I4 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.23□□□□□ -2.37
Trav6-2Q5R1I4 Gm23531-201ENSMUST00000104567 68 ntBASIC0.22□□□□□ -2.37
Trav6-2Q5R1I4 Gm24238-201ENSMUST00000157792 98 ntBASIC0.22□□□□□ -2.37
Trav6-2Q5R1I4 Gm27934-201ENSMUST00000158795 63 ntBASIC0.22□□□□□ -2.37
Trav6-2Q5R1I4 Mir1a-2-201ENSMUST00000198520 72 ntBASIC0.22□□□□□ -2.37
Trav6-2Q5R1I4 Gm45002-201ENSMUST00000208045 120 ntBASIC0.22□□□□□ -2.37
Trav6-2Q5R1I4 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.22□□□□□ -2.37
Trav6-2Q5R1I4 Gm25482-201ENSMUST00000083225 107 ntBASIC0.22□□□□□ -2.37
Trav6-2Q5R1I4 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.21□□□□□ -2.38
Trav6-2Q5R1I4 Gm23258-201ENSMUST00000158319 106 ntBASIC0.21□□□□□ -2.38
Trav6-2Q5R1I4 Gm22088-201ENSMUST00000158341 117 ntBASIC0.21□□□□□ -2.38
Trav6-2Q5R1I4 Gm22239-201ENSMUST00000175220 103 ntBASIC0.21□□□□□ -2.38
Trav6-2Q5R1I4 Gm27475-201ENSMUST00000183420 61 ntBASIC0.21□□□□□ -2.38
Trav6-2Q5R1I4 Mir7065-201ENSMUST00000185110 61 ntBASIC0.21□□□□□ -2.38
Trav6-2Q5R1I4 Mir6375-201ENSMUST00000197176 95 ntBASIC0.21□□□□□ -2.38
Trav6-2Q5R1I4 AC153646.2-201ENSMUST00000220516 109 ntBASIC0.21□□□□□ -2.38
Trav6-2Q5R1I4 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.21□□□□□ -2.38
Trav6-2Q5R1I4 Mir488-201ENSMUST00000093595 109 ntBASIC0.21□□□□□ -2.38
Trav6-2Q5R1I4 Mir670-201ENSMUST00000102380 100 ntBASIC0.2□□□□□ -2.38
Trav6-2Q5R1I4 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.2□□□□□ -2.38
Trav6-2Q5R1I4 Gm23857-201ENSMUST00000158379 111 ntBASIC0.2□□□□□ -2.38
Trav6-2Q5R1I4 Gm23859-201ENSMUST00000158383 64 ntBASIC0.2□□□□□ -2.38
Trav6-2Q5R1I4 Gm26158-201ENSMUST00000158973 119 ntBASIC0.2□□□□□ -2.38
Trav6-2Q5R1I4 Gm16550-201ENSMUST00000162550 126 ntBASIC0.2□□□□□ -2.38
Trav6-2Q5R1I4 Gm27285-201ENSMUST00000183875 127 ntBASIC0.2□□□□□ -2.38
Trav6-2Q5R1I4 Gm27607-201ENSMUST00000185162 122 ntBASIC0.2□□□□□ -2.38
Trav6-2Q5R1I4 Gm26204-201ENSMUST00000082906 107 ntBASIC0.2□□□□□ -2.38
Trav6-2Q5R1I4 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.2□□□□□ -2.38
Trav6-2Q5R1I4 Gm25985-201ENSMUST00000122677 107 ntBASIC0.19□□□□□ -2.38
Trav6-2Q5R1I4 Gm23180-201ENSMUST00000158686 125 ntBASIC0.19□□□□□ -2.38
Trav6-2Q5R1I4 Gm42623-201ENSMUST00000197225 379 ntBASIC0.19□□□□□ -2.38
Trav6-2Q5R1I4 Gm44457-201ENSMUST00000198109 76 ntBASIC0.19□□□□□ -2.38
Trav6-2Q5R1I4 Gm44469-201ENSMUST00000198558 79 ntBASIC0.19□□□□□ -2.38
Trav6-2Q5R1I4 Snord80-202ENSMUST00000199023 77 ntBASIC0.19□□□□□ -2.38
Trav6-2Q5R1I4 Gm3702-201ENSMUST00000211754 346 ntBASIC0.19□□□□□ -2.38
Trav6-2Q5R1I4 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.19□□□□□ -2.38
Trav6-2Q5R1I4 Gm25610-201ENSMUST00000104016 129 ntBASIC0.18□□□□□ -2.38
Trav6-2Q5R1I4 Gm14626-201ENSMUST00000117619 216 ntBASIC0.18□□□□□ -2.38
Trav6-2Q5R1I4 Gm23994-201ENSMUST00000158059 88 ntBASIC0.18□□□□□ -2.38
Trav6-2Q5R1I4 Gm23301-201ENSMUST00000082713 65 ntBASIC0.18□□□□□ -2.38
Trav6-2Q5R1I4 Mir20b-201ENSMUST00000102087 80 ntBASIC0.17□□□□□ -2.38
Trav6-2Q5R1I4 Mir669f-201ENSMUST00000103850 121 ntBASIC0.17□□□□□ -2.38
Trav6-2Q5R1I4 Gm23320-201ENSMUST00000104462 127 ntBASIC0.17□□□□□ -2.38
Trav6-2Q5R1I4 Gm14502-201ENSMUST00000118154 113 ntBASIC0.17□□□□□ -2.38
Trav6-2Q5R1I4 Gm25329-201ENSMUST00000158041 126 ntBASIC0.17□□□□□ -2.38
Trav6-2Q5R1I4 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.17□□□□□ -2.38
Trav6-2Q5R1I4 Gm27717-201ENSMUST00000183933 151 ntBASIC0.17□□□□□ -2.38
Trav6-2Q5R1I4 Mir21b-201ENSMUST00000184317 108 ntBASIC0.17□□□□□ -2.38
Trav6-2Q5R1I4 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.17□□□□□ -2.38
Trav6-2Q5R1I4 Mir7229-201ENSMUST00000197062 53 ntBASIC0.17□□□□□ -2.38
Trav6-2Q5R1I4 Gm43381-201ENSMUST00000198553 165 ntBASIC0.17□□□□□ -2.38
Trav6-2Q5R1I4 Gm25894-201ENSMUST00000083458 75 ntBASIC0.17□□□□□ -2.38
Trav6-2Q5R1I4 Mir302d-201ENSMUST00000083513 66 ntBASIC0.17□□□□□ -2.38
Trav6-2Q5R1I4 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.17□□□□□ -2.38
Trav6-2Q5R1I4 Gm22148-201ENSMUST00000104445 107 ntBASIC0.16□□□□□ -2.38
Trav6-2Q5R1I4 Gm24640-201ENSMUST00000116949 126 ntBASIC0.16□□□□□ -2.38
Trav6-2Q5R1I4 Gm22626-201ENSMUST00000116990 126 ntBASIC0.16□□□□□ -2.38
Trav6-2Q5R1I4 Gm24761-201ENSMUST00000179589 127 ntBASIC0.16□□□□□ -2.38
Trav6-2Q5R1I4 Trbv25-201ENSMUST00000194700 273 ntBASIC0.16□□□□□ -2.38
Trav6-2Q5R1I4 Mir7657-201ENSMUST00000196051 57 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 141.7 ms