Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Gm24522-201ENSMUST00000083964 108 ntBASIC0.17□□□□□ -2.38
Trav6-3Q5R1E6 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.16□□□□□ -2.38
Trav6-3Q5R1E6 Gm25610-201ENSMUST00000104016 129 ntBASIC0.16□□□□□ -2.38
Trav6-3Q5R1E6 Gm23859-201ENSMUST00000158383 64 ntBASIC0.16□□□□□ -2.38
Trav6-3Q5R1E6 Gm27717-201ENSMUST00000183933 151 ntBASIC0.16□□□□□ -2.38
Trav6-3Q5R1E6 Gm44457-201ENSMUST00000198109 76 ntBASIC0.16□□□□□ -2.38
Trav6-3Q5R1E6 Gm44469-201ENSMUST00000198558 79 ntBASIC0.16□□□□□ -2.38
Trav6-3Q5R1E6 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.16□□□□□ -2.38
Trav6-3Q5R1E6 Mir20b-201ENSMUST00000102087 80 ntBASIC0.15□□□□□ -2.39
Trav6-3Q5R1E6 Gm27668-201ENSMUST00000184188 120 ntBASIC0.15□□□□□ -2.39
Trav6-3Q5R1E6 Mir7229-201ENSMUST00000197062 53 ntBASIC0.15□□□□□ -2.39
Trav6-3Q5R1E6 Gm45002-201ENSMUST00000208045 120 ntBASIC0.15□□□□□ -2.39
Trav6-3Q5R1E6 Mir488-201ENSMUST00000093595 109 ntBASIC0.15□□□□□ -2.39
Trav6-3Q5R1E6 Gm25170-201ENSMUST00000104191 129 ntBASIC0.14□□□□□ -2.39
Trav6-3Q5R1E6 Gm23991-201ENSMUST00000117033 93 ntBASIC0.14□□□□□ -2.39
Trav6-3Q5R1E6 Gm16186-201ENSMUST00000120132 216 ntBASIC0.14□□□□□ -2.39
Trav6-3Q5R1E6 Gm13577-201ENSMUST00000121365 205 ntBASIC0.14□□□□□ -2.39
Trav6-3Q5R1E6 Gm23008-201ENSMUST00000158946 80 ntBASIC0.14□□□□□ -2.39
Trav6-3Q5R1E6 Gm27285-201ENSMUST00000183875 127 ntBASIC0.14□□□□□ -2.39
Trav6-3Q5R1E6 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.14□□□□□ -2.39
Trav6-3Q5R1E6 Mir6375-201ENSMUST00000197176 95 ntBASIC0.14□□□□□ -2.39
Trav6-3Q5R1E6 Gm43381-201ENSMUST00000198553 165 ntBASIC0.14□□□□□ -2.39
Trav6-3Q5R1E6 Gm26204-201ENSMUST00000082906 107 ntBASIC0.14□□□□□ -2.39
Trav6-3Q5R1E6 Gm25482-201ENSMUST00000083225 107 ntBASIC0.14□□□□□ -2.39
Trav6-3Q5R1E6 Gm25894-201ENSMUST00000083458 75 ntBASIC0.14□□□□□ -2.39
Trav6-3Q5R1E6 Mir10b-201ENSMUST00000083566 68 ntBASIC0.14□□□□□ -2.39
Trav6-3Q5R1E6 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.14□□□□□ -2.39
Trav6-3Q5R1E6 Gm14502-201ENSMUST00000118154 113 ntBASIC0.13□□□□□ -2.39
Trav6-3Q5R1E6 Gm11248-201ENSMUST00000119568 201 ntBASIC0.13□□□□□ -2.39
Trav6-3Q5R1E6 Gm25985-201ENSMUST00000122677 107 ntBASIC0.13□□□□□ -2.39
Trav6-3Q5R1E6 Gm25329-201ENSMUST00000158041 126 ntBASIC0.13□□□□□ -2.39
Trav6-3Q5R1E6 Gm23258-201ENSMUST00000158319 106 ntBASIC0.13□□□□□ -2.39
Trav6-3Q5R1E6 Scarna8-201ENSMUST00000158333 131 ntBASIC0.13□□□□□ -2.39
Trav6-3Q5R1E6 Gm24761-201ENSMUST00000179589 127 ntBASIC0.13□□□□□ -2.39
Trav6-3Q5R1E6 Mir6365-201ENSMUST00000183990 101 ntBASIC0.13□□□□□ -2.39
Trav6-3Q5R1E6 Trbv25-201ENSMUST00000194700 273 ntBASIC0.13□□□□□ -2.39
Trav6-3Q5R1E6 Mir7657-201ENSMUST00000196051 57 ntBASIC0.13□□□□□ -2.39
Trav6-3Q5R1E6 Gm26379-202ENSMUST00000200225 132 ntBASIC0.13□□□□□ -2.39
Trav6-3Q5R1E6 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.13□□□□□ -2.39
Trav6-3Q5R1E6 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
Trav6-3Q5R1E6 Gm12469-201ENSMUST00000117623 207 ntBASIC0.12□□□□□ -2.39
Trav6-3Q5R1E6 Mir3108-201ENSMUST00000175500 79 ntBASIC0.12□□□□□ -2.39
Trav6-3Q5R1E6 Mir6342-201ENSMUST00000183870 125 ntBASIC0.12□□□□□ -2.39
Trav6-3Q5R1E6 Gm27446-201ENSMUST00000183963 89 ntBASIC0.12□□□□□ -2.39
Trav6-3Q5R1E6 Mir3969-201ENSMUST00000197106 92 ntBASIC0.12□□□□□ -2.39
Trav6-3Q5R1E6 Gm42623-201ENSMUST00000197225 379 ntBASIC0.12□□□□□ -2.39
Trav6-3Q5R1E6 Mir1949-202ENSMUST00000199259 70 ntBASIC0.12□□□□□ -2.39
Trav6-3Q5R1E6 Gm44455-201ENSMUST00000200061 82 ntBASIC0.12□□□□□ -2.39
Trav6-3Q5R1E6 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.12□□□□□ -2.39
Trav6-3Q5R1E6 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.12□□□□□ -2.39
Trav6-3Q5R1E6 Snord61-201ENSMUST00000083176 71 ntBASIC0.12□□□□□ -2.39
Trav6-3Q5R1E6 Gm23320-201ENSMUST00000104462 127 ntBASIC0.11□□□□□ -2.39
Trav6-3Q5R1E6 Gm22030-201ENSMUST00000116942 63 ntBASIC0.11□□□□□ -2.39
Trav6-3Q5R1E6 Gm22541-201ENSMUST00000158165 127 ntBASIC0.11□□□□□ -2.39
Trav6-3Q5R1E6 Gm23821-201ENSMUST00000158738 106 ntBASIC0.11□□□□□ -2.39
Trav6-3Q5R1E6 Gm29535-201ENSMUST00000185723 109 ntBASIC0.11□□□□□ -2.39
Trav6-3Q5R1E6 Gm28143-201ENSMUST00000191082 109 ntBASIC0.11□□□□□ -2.39
Trav6-3Q5R1E6 Snord80-202ENSMUST00000199023 77 ntBASIC0.11□□□□□ -2.39
Trav6-3Q5R1E6 Gm42506-201ENSMUST00000202009 150 ntBASIC0.11□□□□□ -2.39
Trav6-3Q5R1E6 mt-Ta-201ENSMUST00000082398 69 ntBASIC0.11□□□□□ -2.39
Trav6-3Q5R1E6 Mir302d-201ENSMUST00000083513 66 ntBASIC0.11□□□□□ -2.39
Trav6-3Q5R1E6 Gm25408-201ENSMUST00000104104 133 ntBASIC0.1□□□□□ -2.39
Trav6-3Q5R1E6 Gm24278-201ENSMUST00000104239 127 ntBASIC0.1□□□□□ -2.39
Trav6-3Q5R1E6 Gm22148-201ENSMUST00000104445 107 ntBASIC0.1□□□□□ -2.39
Trav6-3Q5R1E6 Gm24833-201ENSMUST00000116775 120 ntBASIC0.1□□□□□ -2.39
Trav6-3Q5R1E6 Gm24640-201ENSMUST00000116949 126 ntBASIC0.1□□□□□ -2.39
Trav6-3Q5R1E6 Gm22626-201ENSMUST00000116990 126 ntBASIC0.1□□□□□ -2.39
Trav6-3Q5R1E6 Gm24129-201ENSMUST00000158537 97 ntBASIC0.1□□□□□ -2.39
Trav6-3Q5R1E6 Gm24321-201ENSMUST00000175348 80 ntBASIC0.1□□□□□ -2.39
Trav6-3Q5R1E6 Mir6394-201ENSMUST00000184738 99 ntBASIC0.1□□□□□ -2.39
Trav6-3Q5R1E6 Gm27943-201ENSMUST00000184844 116 ntBASIC0.1□□□□□ -2.39
Trav6-3Q5R1E6 Mir710-201ENSMUST00000102088 110 ntBASIC0.09□□□□□ -2.4
Trav6-3Q5R1E6 Gm23321-201ENSMUST00000104465 126 ntBASIC0.09□□□□□ -2.4
Trav6-3Q5R1E6 Gm25952-201ENSMUST00000175329 74 ntBASIC0.09□□□□□ -2.4
Trav6-3Q5R1E6 Mir3105-201ENSMUST00000175480 85 ntBASIC0.09□□□□□ -2.4
Trav6-3Q5R1E6 Gm26426-201ENSMUST00000177866 123 ntBASIC0.09□□□□□ -2.4
Trav6-3Q5R1E6 Gm26060-201ENSMUST00000180094 123 ntBASIC0.09□□□□□ -2.4
Trav6-3Q5R1E6 Gm42935-201ENSMUST00000202004 151 ntBASIC0.09□□□□□ -2.4
Trav6-3Q5R1E6 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.08□□□□□ -2.4
Trav6-3Q5R1E6 Mir1191-201ENSMUST00000116883 120 ntBASIC0.08□□□□□ -2.4
Trav6-3Q5R1E6 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.08□□□□□ -2.4
Trav6-3Q5R1E6 Gm22989-201ENSMUST00000158313 86 ntBASIC0.08□□□□□ -2.4
Trav6-3Q5R1E6 Gm17020-201ENSMUST00000172274 274 ntBASIC0.08□□□□□ -2.4
Trav6-3Q5R1E6 Gm22259-201ENSMUST00000178926 107 ntBASIC0.08□□□□□ -2.4
Trav6-3Q5R1E6 Gm27792-201ENSMUST00000184031 115 ntBASIC0.08□□□□□ -2.4
Trav6-3Q5R1E6 Gm27465-201ENSMUST00000184290 91 ntBASIC0.08□□□□□ -2.4
Trav6-3Q5R1E6 Mir21b-201ENSMUST00000184317 108 ntBASIC0.08□□□□□ -2.4
Trav6-3Q5R1E6 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.08□□□□□ -2.4
Trav6-3Q5R1E6 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.08□□□□□ -2.4
Trav6-3Q5R1E6 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.08□□□□□ -2.4
Trav6-3Q5R1E6 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.08□□□□□ -2.4
Trav6-3Q5R1E6 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.08□□□□□ -2.4
Trav6-3Q5R1E6 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.08□□□□□ -2.4
Trav6-3Q5R1E6 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.08□□□□□ -2.4
Trav6-3Q5R1E6 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.08□□□□□ -2.4
Trav6-3Q5R1E6 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.08□□□□□ -2.4
Trav6-3Q5R1E6 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.08□□□□□ -2.4
Trav6-3Q5R1E6 Mir344-201ENSMUST00000083634 95 ntBASIC0.08□□□□□ -2.4
Trav6-3Q5R1E6 Gm21940-201ENSMUST00000204940 2278 ntBASIC0.08□□□□□ -2.4
Trav6-3Q5R1E6 Gm25040-201ENSMUST00000103877 66 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 143.4 ms