Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Mir6481-201ENSMUST00000184617 110 ntBASIC0.76□□□□□ -2.29
Trim58Q5NCC9 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
Trim58Q5NCC9 Gm42506-201ENSMUST00000202009 150 ntBASIC0.76□□□□□ -2.29
Trim58Q5NCC9 Gm25797-201ENSMUST00000082640 107 ntBASIC0.76□□□□□ -2.29
Trim58Q5NCC9 Gm24461-201ENSMUST00000082735 103 ntBASIC0.76□□□□□ -2.29
Trim58Q5NCC9 Mir216a-201ENSMUST00000083605 72 ntBASIC0.76□□□□□ -2.29
Trim58Q5NCC9 Mir200b-201ENSMUST00000083615 70 ntBASIC0.76□□□□□ -2.29
Trim58Q5NCC9 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
Trim58Q5NCC9 Gm25544-201ENSMUST00000122676 120 ntBASIC0.75□□□□□ -2.29
Trim58Q5NCC9 Gm20409-201ENSMUST00000173457 130 ntBASIC0.75□□□□□ -2.29
Trim58Q5NCC9 Gm22801-201ENSMUST00000175624 84 ntBASIC0.75□□□□□ -2.29
Trim58Q5NCC9 Mir6985-201ENSMUST00000184641 61 ntBASIC0.75□□□□□ -2.29
Trim58Q5NCC9 Gm44458-201ENSMUST00000196594 143 ntBASIC0.75□□□□□ -2.29
Trim58Q5NCC9 Gm25081-201ENSMUST00000082534 108 ntBASIC0.75□□□□□ -2.29
Trim58Q5NCC9 Mir344-201ENSMUST00000083634 95 ntBASIC0.75□□□□□ -2.29
Trim58Q5NCC9 Gm24271-201ENSMUST00000102327 111 ntBASIC0.74□□□□□ -2.29
Trim58Q5NCC9 Gm14039-201ENSMUST00000118705 101 ntBASIC0.74□□□□□ -2.29
Trim58Q5NCC9 Gm24476-201ENSMUST00000157437 131 ntBASIC0.74□□□□□ -2.29
Trim58Q5NCC9 Gm25364-201ENSMUST00000158851 107 ntBASIC0.74□□□□□ -2.29
Trim58Q5NCC9 Gm25166-201ENSMUST00000158909 111 ntBASIC0.74□□□□□ -2.29
Trim58Q5NCC9 Mir3094-201ENSMUST00000175121 64 ntBASIC0.74□□□□□ -2.29
Trim58Q5NCC9 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
Trim58Q5NCC9 Gm44322-201ENSMUST00000196830 115 ntBASIC0.74□□□□□ -2.29
Trim58Q5NCC9 Gm43381-201ENSMUST00000198553 165 ntBASIC0.74□□□□□ -2.29
Trim58Q5NCC9 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.74□□□□□ -2.29
Trim58Q5NCC9 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.74□□□□□ -2.29
Trim58Q5NCC9 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.74□□□□□ -2.29
Trim58Q5NCC9 Gm24728-201ENSMUST00000158226 125 ntBASIC0.73□□□□□ -2.29
Trim58Q5NCC9 Gm44488-201ENSMUST00000199467 119 ntBASIC0.73□□□□□ -2.29
Trim58Q5NCC9 Gm44807-201ENSMUST00000206115 154 ntBASIC0.73□□□□□ -2.29
Trim58Q5NCC9 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.73□□□□□ -2.29
Trim58Q5NCC9 Gm10172-201ENSMUST00000085929 558 ntBASIC0.73□□□□□ -2.29
Trim58Q5NCC9 Mir669b-201ENSMUST00000102172 97 ntBASIC0.72□□□□□ -2.29
Trim58Q5NCC9 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Trim58Q5NCC9 Gm26018-201ENSMUST00000104406 128 ntBASIC0.72□□□□□ -2.29
Trim58Q5NCC9 Gm22105-201ENSMUST00000116734 116 ntBASIC0.72□□□□□ -2.29
Trim58Q5NCC9 Gm22999-201ENSMUST00000157082 88 ntBASIC0.72□□□□□ -2.29
Trim58Q5NCC9 Gm26412-201ENSMUST00000157666 55 ntBASIC0.72□□□□□ -2.29
Trim58Q5NCC9 Gm24747-201ENSMUST00000157835 87 ntBASIC0.72□□□□□ -2.29
Trim58Q5NCC9 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.72□□□□□ -2.29
Trim58Q5NCC9 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
Trim58Q5NCC9 Mir695-201ENSMUST00000102261 109 ntBASIC0.71□□□□□ -2.3
Trim58Q5NCC9 Snord90-201ENSMUST00000104568 111 ntBASIC0.71□□□□□ -2.3
Trim58Q5NCC9 Gm25110-201ENSMUST00000116684 121 ntBASIC0.71□□□□□ -2.3
Trim58Q5NCC9 Gm25775-201ENSMUST00000116716 121 ntBASIC0.71□□□□□ -2.3
Trim58Q5NCC9 Gm24795-201ENSMUST00000116737 121 ntBASIC0.71□□□□□ -2.3
Trim58Q5NCC9 Gm25171-201ENSMUST00000116926 121 ntBASIC0.71□□□□□ -2.3
Trim58Q5NCC9 Gm26358-201ENSMUST00000158215 97 ntBASIC0.71□□□□□ -2.3
Trim58Q5NCC9 Gm24547-201ENSMUST00000158649 149 ntBASIC0.71□□□□□ -2.3
Trim58Q5NCC9 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.71□□□□□ -2.3
Trim58Q5NCC9 Mir1933-201ENSMUST00000158930 88 ntBASIC0.71□□□□□ -2.3
Trim58Q5NCC9 Ighv15-1-201ENSMUST00000194450 276 ntBASIC0.71□□□□□ -2.3
Trim58Q5NCC9 Mir3969-201ENSMUST00000197106 92 ntBASIC0.71□□□□□ -2.3
Trim58Q5NCC9 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.71□□□□□ -2.3
Trim58Q5NCC9 Snord32a-201ENSMUST00000083285 83 ntBASIC0.71□□□□□ -2.3
Trim58Q5NCC9 Mir10b-201ENSMUST00000083566 68 ntBASIC0.71□□□□□ -2.3
Trim58Q5NCC9 Snord69-201ENSMUST00000104024 80 ntBASIC0.7□□□□□ -2.3
Trim58Q5NCC9 Scarna9-201ENSMUST00000104318 70 ntBASIC0.7□□□□□ -2.3
Trim58Q5NCC9 Gm24575-201ENSMUST00000175502 77 ntBASIC0.7□□□□□ -2.3
Trim58Q5NCC9 Gm26236-201ENSMUST00000175536 137 ntBASIC0.7□□□□□ -2.3
Trim58Q5NCC9 Gm37545-201ENSMUST00000186512 148 ntBASIC0.7□□□□□ -2.3
Trim58Q5NCC9 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.7□□□□□ -2.3
Trim58Q5NCC9 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
Trim58Q5NCC9 Mir324-201ENSMUST00000083600 89 ntBASIC0.7□□□□□ -2.3
Trim58Q5NCC9 Mir1899-201ENSMUST00000122798 96 ntBASIC0.69□□□□□ -2.3
Trim58Q5NCC9 Gm23253-201ENSMUST00000157441 104 ntBASIC0.69□□□□□ -2.3
Trim58Q5NCC9 Gm25329-201ENSMUST00000158041 126 ntBASIC0.69□□□□□ -2.3
Trim58Q5NCC9 Mir15a-201ENSMUST00000175266 84 ntBASIC0.69□□□□□ -2.3
Trim58Q5NCC9 Mir3079-201ENSMUST00000175428 90 ntBASIC0.69□□□□□ -2.3
Trim58Q5NCC9 Gm27446-201ENSMUST00000183963 89 ntBASIC0.69□□□□□ -2.3
Trim58Q5NCC9 Gm22302-201ENSMUST00000082657 106 ntBASIC0.69□□□□□ -2.3
Trim58Q5NCC9 Gm23509-201ENSMUST00000083080 160 ntBASIC0.69□□□□□ -2.3
Trim58Q5NCC9 Mir709-201ENSMUST00000102190 88 ntBASIC0.68□□□□□ -2.3
Trim58Q5NCC9 Gm26091-201ENSMUST00000122704 82 ntBASIC0.68□□□□□ -2.3
Trim58Q5NCC9 Gm23504-201ENSMUST00000158988 95 ntBASIC0.68□□□□□ -2.3
Trim58Q5NCC9 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.68□□□□□ -2.3
Trim58Q5NCC9 Mir33-201ENSMUST00000083531 69 ntBASIC0.68□□□□□ -2.3
Trim58Q5NCC9 Gm15654-201ENSMUST00000152660 300 ntBASIC0.67□□□□□ -2.3
Trim58Q5NCC9 Gm17528-201ENSMUST00000171026 239 ntBASIC0.67□□□□□ -2.3
Trim58Q5NCC9 Gm24920-201ENSMUST00000083018 85 ntBASIC0.67□□□□□ -2.3
Trim58Q5NCC9 Gm26011-201ENSMUST00000104410 104 ntBASIC0.66□□□□□ -2.3
Trim58Q5NCC9 Gm14946-201ENSMUST00000119859 296 ntBASIC0.66□□□□□ -2.3
Trim58Q5NCC9 Gm22815-201ENSMUST00000157451 62 ntBASIC0.66□□□□□ -2.3
Trim58Q5NCC9 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.66□□□□□ -2.3
Trim58Q5NCC9 Gm22753-201ENSMUST00000083657 107 ntBASIC0.66□□□□□ -2.3
Trim58Q5NCC9 Gm26338-201ENSMUST00000102372 110 ntBASIC0.65□□□□□ -2.31
Trim58Q5NCC9 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.65□□□□□ -2.31
Trim58Q5NCC9 Gm25901-201ENSMUST00000158494 130 ntBASIC0.65□□□□□ -2.31
Trim58Q5NCC9 Gm25444-201ENSMUST00000158999 113 ntBASIC0.65□□□□□ -2.31
Trim58Q5NCC9 Mir7657-201ENSMUST00000196051 57 ntBASIC0.65□□□□□ -2.31
Trim58Q5NCC9 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.65□□□□□ -2.31
Trim58Q5NCC9 DQ267101-201ENSMUST00000082562 73 ntBASIC0.65□□□□□ -2.31
Trim58Q5NCC9 Gm23881-201ENSMUST00000116872 66 ntBASIC0.64□□□□□ -2.31
Trim58Q5NCC9 Gm24238-201ENSMUST00000157792 98 ntBASIC0.64□□□□□ -2.31
Trim58Q5NCC9 Gm22349-201ENSMUST00000157864 107 ntBASIC0.64□□□□□ -2.31
Trim58Q5NCC9 Gm24678-201ENSMUST00000158756 104 ntBASIC0.64□□□□□ -2.31
Trim58Q5NCC9 Gm25071-201ENSMUST00000175232 70 ntBASIC0.64□□□□□ -2.31
Trim58Q5NCC9 Gm24323-201ENSMUST00000175342 77 ntBASIC0.64□□□□□ -2.31
Trim58Q5NCC9 Mir6390-201ENSMUST00000184405 129 ntBASIC0.64□□□□□ -2.31
Trim58Q5NCC9 Mir30f-201ENSMUST00000196073 92 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 155.5 ms