Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
Brf2Q3UAW9 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.7□□□□□ -2.3
Brf2Q3UAW9 Gm23445-201ENSMUST00000082800 107 ntBASIC0.7□□□□□ -2.3
Brf2Q3UAW9 Snord69-201ENSMUST00000104024 80 ntBASIC0.69□□□□□ -2.3
Brf2Q3UAW9 Scarna9-201ENSMUST00000104318 70 ntBASIC0.69□□□□□ -2.3
Brf2Q3UAW9 Gm25506-201ENSMUST00000104339 70 ntBASIC0.69□□□□□ -2.3
Brf2Q3UAW9 Gm26011-201ENSMUST00000104410 104 ntBASIC0.69□□□□□ -2.3
Brf2Q3UAW9 Mir1966-201ENSMUST00000158807 108 ntBASIC0.69□□□□□ -2.3
Brf2Q3UAW9 Gm22466-201ENSMUST00000175278 69 ntBASIC0.69□□□□□ -2.3
Brf2Q3UAW9 Mir6390-201ENSMUST00000184405 129 ntBASIC0.69□□□□□ -2.3
Brf2Q3UAW9 Gm36956-201ENSMUST00000193830 214 ntBASIC0.69□□□□□ -2.3
Brf2Q3UAW9 Mir3969-201ENSMUST00000197106 92 ntBASIC0.69□□□□□ -2.3
Brf2Q3UAW9 Gm24624-201ENSMUST00000082617 164 ntBASIC0.69□□□□□ -2.3
Brf2Q3UAW9 Gm24549-201ENSMUST00000158647 139 ntBASIC0.68□□□□□ -2.3
Brf2Q3UAW9 Mir3968-201ENSMUST00000175355 100 ntBASIC0.68□□□□□ -2.3
Brf2Q3UAW9 Mir6369-201ENSMUST00000183772 106 ntBASIC0.68□□□□□ -2.3
Brf2Q3UAW9 Gm27446-201ENSMUST00000183963 89 ntBASIC0.68□□□□□ -2.3
Brf2Q3UAW9 Mir7052-201ENSMUST00000184821 65 ntBASIC0.68□□□□□ -2.3
Brf2Q3UAW9 Gm37545-201ENSMUST00000186512 148 ntBASIC0.68□□□□□ -2.3
Brf2Q3UAW9 Gm28767-201ENSMUST00000188601 114 ntBASIC0.68□□□□□ -2.3
Brf2Q3UAW9 Gm44211-201ENSMUST00000204867 145 ntBASIC0.68□□□□□ -2.3
Brf2Q3UAW9 Gm25814-201ENSMUST00000082754 107 ntBASIC0.68□□□□□ -2.3
Brf2Q3UAW9 Gm24579-201ENSMUST00000103964 144 ntBASIC0.67□□□□□ -2.3
Brf2Q3UAW9 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Brf2Q3UAW9 Gm12432-201ENSMUST00000119540 186 ntBASIC0.67□□□□□ -2.3
Brf2Q3UAW9 Gm24476-201ENSMUST00000157437 131 ntBASIC0.67□□□□□ -2.3
Brf2Q3UAW9 Gm23416-201ENSMUST00000175520 95 ntBASIC0.67□□□□□ -2.3
Brf2Q3UAW9 Gm25820-201ENSMUST00000198589 127 ntBASIC0.67□□□□□ -2.3
Brf2Q3UAW9 Gm44807-201ENSMUST00000206115 154 ntBASIC0.67□□□□□ -2.3
Brf2Q3UAW9 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.67□□□□□ -2.3
Brf2Q3UAW9 Gm24030-201ENSMUST00000083931 164 ntBASIC0.67□□□□□ -2.3
Brf2Q3UAW9 Gm25610-201ENSMUST00000104016 129 ntBASIC0.66□□□□□ -2.3
Brf2Q3UAW9 Gm14946-201ENSMUST00000119859 296 ntBASIC0.66□□□□□ -2.3
Brf2Q3UAW9 Gm15654-201ENSMUST00000152660 300 ntBASIC0.66□□□□□ -2.3
Brf2Q3UAW9 Gm25444-201ENSMUST00000158999 113 ntBASIC0.66□□□□□ -2.3
Brf2Q3UAW9 Mir30f-201ENSMUST00000196073 92 ntBASIC0.66□□□□□ -2.3
Brf2Q3UAW9 Gm43749-201ENSMUST00000199345 352 ntBASIC0.66□□□□□ -2.3
Brf2Q3UAW9 Gm10172-201ENSMUST00000085929 558 ntBASIC0.66□□□□□ -2.3
Brf2Q3UAW9 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
Brf2Q3UAW9 Gm26018-201ENSMUST00000104406 128 ntBASIC0.65□□□□□ -2.31
Brf2Q3UAW9 Mir3109-201ENSMUST00000175301 88 ntBASIC0.65□□□□□ -2.31
Brf2Q3UAW9 Mir1954-201ENSMUST00000175595 86 ntBASIC0.65□□□□□ -2.31
Brf2Q3UAW9 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
Brf2Q3UAW9 Gm26379-202ENSMUST00000200225 132 ntBASIC0.65□□□□□ -2.31
Brf2Q3UAW9 Gm18502-201ENSMUST00000218679 199 ntBASIC0.65□□□□□ -2.31
Brf2Q3UAW9 AC151902.2-201ENSMUST00000226419 301 ntBASIC0.65□□□□□ -2.31
Brf2Q3UAW9 Gm23509-201ENSMUST00000083080 160 ntBASIC0.65□□□□□ -2.31
Brf2Q3UAW9 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.64□□□□□ -2.31
Brf2Q3UAW9 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.64□□□□□ -2.31
Brf2Q3UAW9 Gm25060-201ENSMUST00000157374 130 ntBASIC0.64□□□□□ -2.31
Brf2Q3UAW9 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.64□□□□□ -2.31
Brf2Q3UAW9 Gm20409-201ENSMUST00000173457 130 ntBASIC0.64□□□□□ -2.31
Brf2Q3UAW9 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.64□□□□□ -2.31
Brf2Q3UAW9 Mir7657-201ENSMUST00000196051 57 ntBASIC0.64□□□□□ -2.31
Brf2Q3UAW9 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.64□□□□□ -2.31
Brf2Q3UAW9 Gm22753-201ENSMUST00000083657 107 ntBASIC0.64□□□□□ -2.31
Brf2Q3UAW9 Gm6985-201ENSMUST00000121255 271 ntBASIC0.63□□□□□ -2.31
Brf2Q3UAW9 Gm23253-201ENSMUST00000157441 104 ntBASIC0.63□□□□□ -2.31
Brf2Q3UAW9 Gm24500-201ENSMUST00000158447 124 ntBASIC0.63□□□□□ -2.31
Brf2Q3UAW9 Gm27289-201ENSMUST00000183341 82 ntBASIC0.63□□□□□ -2.31
Brf2Q3UAW9 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.63□□□□□ -2.31
Brf2Q3UAW9 Gm26301-201ENSMUST00000104813 95 ntBASIC0.62□□□□□ -2.31
Brf2Q3UAW9 Gm15289-201ENSMUST00000117793 244 ntBASIC0.62□□□□□ -2.31
Brf2Q3UAW9 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.62□□□□□ -2.31
Brf2Q3UAW9 Gm23337-201ENSMUST00000158959 118 ntBASIC0.62□□□□□ -2.31
Brf2Q3UAW9 Gm27928-201ENSMUST00000183747 256 ntBASIC0.62□□□□□ -2.31
Brf2Q3UAW9 Mir6481-201ENSMUST00000184617 110 ntBASIC0.62□□□□□ -2.31
Brf2Q3UAW9 Gm44322-201ENSMUST00000196830 115 ntBASIC0.62□□□□□ -2.31
Brf2Q3UAW9 Snord90-201ENSMUST00000104568 111 ntBASIC0.61□□□□□ -2.31
Brf2Q3UAW9 Gm14626-201ENSMUST00000117619 216 ntBASIC0.61□□□□□ -2.31
Brf2Q3UAW9 Mir1899-201ENSMUST00000122798 96 ntBASIC0.61□□□□□ -2.31
Brf2Q3UAW9 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Brf2Q3UAW9 Gm23989-201ENSMUST00000117030 66 ntBASIC0.6□□□□□ -2.31
Brf2Q3UAW9 Gm22522-201ENSMUST00000158271 151 ntBASIC0.6□□□□□ -2.31
Brf2Q3UAW9 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.6□□□□□ -2.31
Brf2Q3UAW9 Mir216a-201ENSMUST00000083605 72 ntBASIC0.6□□□□□ -2.31
Brf2Q3UAW9 Mir669b-201ENSMUST00000102172 97 ntBASIC0.59□□□□□ -2.31
Brf2Q3UAW9 Gm23988-201ENSMUST00000117034 122 ntBASIC0.59□□□□□ -2.31
Brf2Q3UAW9 Gm25329-201ENSMUST00000158041 126 ntBASIC0.59□□□□□ -2.31
Brf2Q3UAW9 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.59□□□□□ -2.31
Brf2Q3UAW9 Gm27993-201ENSMUST00000184362 85 ntBASIC0.59□□□□□ -2.31
Brf2Q3UAW9 Ighv15-1-201ENSMUST00000194450 276 ntBASIC0.59□□□□□ -2.31
Brf2Q3UAW9 AC168880.2-201ENSMUST00000224488 201 ntBASIC0.59□□□□□ -2.31
Brf2Q3UAW9 Gm25797-201ENSMUST00000082640 107 ntBASIC0.59□□□□□ -2.31
Brf2Q3UAW9 Gm24461-201ENSMUST00000082735 103 ntBASIC0.59□□□□□ -2.31
Brf2Q3UAW9 Gm24683-201ENSMUST00000104840 88 ntBASIC0.58□□□□□ -2.32
Brf2Q3UAW9 Gm24246-201ENSMUST00000157315 132 ntBASIC0.58□□□□□ -2.32
Brf2Q3UAW9 Gm26484-201ENSMUST00000158018 106 ntBASIC0.58□□□□□ -2.32
Brf2Q3UAW9 Gm25901-201ENSMUST00000158494 130 ntBASIC0.58□□□□□ -2.32
Brf2Q3UAW9 Mir6389-201ENSMUST00000183661 102 ntBASIC0.58□□□□□ -2.32
Brf2Q3UAW9 Gm27656-201ENSMUST00000185055 80 ntBASIC0.58□□□□□ -2.32
Brf2Q3UAW9 Gm37330-201ENSMUST00000192606 153 ntBASIC0.58□□□□□ -2.32
Brf2Q3UAW9 Gm26091-201ENSMUST00000122704 82 ntBASIC0.57□□□□□ -2.32
Brf2Q3UAW9 Gm16265-201ENSMUST00000134558 108 ntBASIC0.57□□□□□ -2.32
Brf2Q3UAW9 Gm27699-201ENSMUST00000183553 180 ntBASIC0.57□□□□□ -2.32
Brf2Q3UAW9 Gm2077-201ENSMUST00000195017 319 ntBASIC0.57□□□□□ -2.32
Brf2Q3UAW9 Gm23301-201ENSMUST00000082713 65 ntBASIC0.57□□□□□ -2.32
Brf2Q3UAW9 Snord60-201ENSMUST00000082834 78 ntBASIC0.57□□□□□ -2.32
Brf2Q3UAW9 Mir410-201ENSMUST00000083563 81 ntBASIC0.57□□□□□ -2.32
Brf2Q3UAW9 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 144.8 ms