Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm22431-201ENSMUST00000158545 107 ntBASIC0.45□□□□□ -2.34
Traf1P39428 Gm23209-201ENSMUST00000158667 110 ntBASIC0.45□□□□□ -2.34
Traf1P39428 Gm16550-201ENSMUST00000162550 126 ntBASIC0.45□□□□□ -2.34
Traf1P39428 Gm26116-201ENSMUST00000175600 77 ntBASIC0.45□□□□□ -2.34
Traf1P39428 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.45□□□□□ -2.34
Traf1P39428 Gm8508-201ENSMUST00000061226 363 ntBASIC0.45□□□□□ -2.34
Traf1P39428 Gm24590-201ENSMUST00000116699 119 ntBASIC0.44□□□□□ -2.34
Traf1P39428 Gm25769-201ENSMUST00000158569 127 ntBASIC0.44□□□□□ -2.34
Traf1P39428 Gm26360-201ENSMUST00000158872 103 ntBASIC0.44□□□□□ -2.34
Traf1P39428 Gm25444-201ENSMUST00000158999 113 ntBASIC0.44□□□□□ -2.34
Traf1P39428 Mir721-201ENSMUST00000200230 88 ntBASIC0.44□□□□□ -2.34
Traf1P39428 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
Traf1P39428 mt-Td-201ENSMUST00000082404 70 ntBASIC0.44□□□□□ -2.34
Traf1P39428 Gm17020-201ENSMUST00000172274 274 ntBASIC0.43□□□□□ -2.34
Traf1P39428 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
Traf1P39428 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.43□□□□□ -2.34
Traf1P39428 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.43□□□□□ -2.34
Traf1P39428 Mir411-201ENSMUST00000083543 82 ntBASIC0.43□□□□□ -2.34
Traf1P39428 Scarna9-201ENSMUST00000104318 70 ntBASIC0.42□□□□□ -2.34
Traf1P39428 Gm25985-201ENSMUST00000122677 107 ntBASIC0.42□□□□□ -2.34
Traf1P39428 Gm25653-201ENSMUST00000158473 138 ntBASIC0.42□□□□□ -2.34
Traf1P39428 Gm24575-201ENSMUST00000175502 77 ntBASIC0.42□□□□□ -2.34
Traf1P39428 Mir7010-201ENSMUST00000183464 63 ntBASIC0.42□□□□□ -2.34
Traf1P39428 Gm27285-201ENSMUST00000183875 127 ntBASIC0.42□□□□□ -2.34
Traf1P39428 Snord80-202ENSMUST00000199023 77 ntBASIC0.42□□□□□ -2.34
Traf1P39428 Gm45541-201ENSMUST00000210443 54 ntBASIC0.42□□□□□ -2.34
Traf1P39428 Mir201-201ENSMUST00000083470 66 ntBASIC0.42□□□□□ -2.34
Traf1P39428 Gm24555-201ENSMUST00000104548 124 ntBASIC0.41□□□□□ -2.34
Traf1P39428 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
Traf1P39428 Gm26403-201ENSMUST00000158500 105 ntBASIC0.41□□□□□ -2.34
Traf1P39428 Gm22476-201ENSMUST00000158902 100 ntBASIC0.41□□□□□ -2.34
Traf1P39428 Mir488-201ENSMUST00000093595 109 ntBASIC0.41□□□□□ -2.34
Traf1P39428 Gm22148-201ENSMUST00000104445 107 ntBASIC0.4□□□□□ -2.35
Traf1P39428 Gm26303-201ENSMUST00000116845 119 ntBASIC0.4□□□□□ -2.35
Traf1P39428 Gm14039-201ENSMUST00000118705 101 ntBASIC0.4□□□□□ -2.35
Traf1P39428 Gm22983-201ENSMUST00000158308 104 ntBASIC0.4□□□□□ -2.35
Traf1P39428 Gm25633-201ENSMUST00000178565 107 ntBASIC0.4□□□□□ -2.35
Traf1P39428 Gm28767-201ENSMUST00000188601 114 ntBASIC0.4□□□□□ -2.35
Traf1P39428 Gm37624-201ENSMUST00000193751 219 ntBASIC0.4□□□□□ -2.35
Traf1P39428 Gm5002-201ENSMUST00000207145 223 ntBASIC0.4□□□□□ -2.35
Traf1P39428 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.4□□□□□ -2.35
Traf1P39428 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.4□□□□□ -2.35
Traf1P39428 Mir302d-201ENSMUST00000083513 66 ntBASIC0.4□□□□□ -2.35
Traf1P39428 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.4□□□□□ -2.35
Traf1P39428 Mir1899-201ENSMUST00000122798 96 ntBASIC0.39□□□□□ -2.35
Traf1P39428 Gm23080-201ENSMUST00000157846 103 ntBASIC0.39□□□□□ -2.35
Traf1P39428 Gm23852-201ENSMUST00000158376 77 ntBASIC0.39□□□□□ -2.35
Traf1P39428 Gm23140-201ENSMUST00000082487 107 ntBASIC0.39□□□□□ -2.35
Traf1P39428 Gm24457-201ENSMUST00000083196 105 ntBASIC0.39□□□□□ -2.35
Traf1P39428 Gm23461-201ENSMUST00000083265 107 ntBASIC0.39□□□□□ -2.35
Traf1P39428 Mir1197-201ENSMUST00000117037 120 ntBASIC0.38□□□□□ -2.35
Traf1P39428 Gm23859-201ENSMUST00000158383 64 ntBASIC0.38□□□□□ -2.35
Traf1P39428 Mir100-201ENSMUST00000175270 80 ntBASIC0.38□□□□□ -2.35
Traf1P39428 Gm22621-201ENSMUST00000179678 74 ntBASIC0.38□□□□□ -2.35
Traf1P39428 Gm27792-201ENSMUST00000184031 115 ntBASIC0.38□□□□□ -2.35
Traf1P39428 Mir1a-2-201ENSMUST00000198520 72 ntBASIC0.38□□□□□ -2.35
Traf1P39428 Gm44922-201ENSMUST00000206690 90 ntBASIC0.38□□□□□ -2.35
Traf1P39428 Gm23301-201ENSMUST00000082713 65 ntBASIC0.38□□□□□ -2.35
Traf1P39428 Mir466h-201ENSMUST00000104748 81 ntBASIC0.37□□□□□ -2.35
Traf1P39428 Mir1298-201ENSMUST00000116681 98 ntBASIC0.37□□□□□ -2.35
Traf1P39428 Gm22348-201ENSMUST00000178674 79 ntBASIC0.37□□□□□ -2.35
Traf1P39428 Gm37116-201ENSMUST00000195161 147 ntBASIC0.37□□□□□ -2.35
Traf1P39428 Gm10172-201ENSMUST00000085929 558 ntBASIC0.37□□□□□ -2.35
Traf1P39428 Mir489-201ENSMUST00000093599 107 ntBASIC0.37□□□□□ -2.35
Traf1P39428 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
Traf1P39428 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
Traf1P39428 Gm44489-201ENSMUST00000104619 97 ntBASIC0.36□□□□□ -2.35
Traf1P39428 Gm25316-201ENSMUST00000116826 118 ntBASIC0.36□□□□□ -2.35
Traf1P39428 Gm14502-201ENSMUST00000118154 113 ntBASIC0.36□□□□□ -2.35
Traf1P39428 Gm22706-201ENSMUST00000157907 112 ntBASIC0.36□□□□□ -2.35
Traf1P39428 Gm24772-201ENSMUST00000158507 110 ntBASIC0.36□□□□□ -2.35
Traf1P39428 Gm23303-201ENSMUST00000082714 152 ntBASIC0.36□□□□□ -2.35
Traf1P39428 Gm25136-201ENSMUST00000083253 115 ntBASIC0.36□□□□□ -2.35
Traf1P39428 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.35□□□□□ -2.35
Traf1P39428 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.35□□□□□ -2.35
Traf1P39428 Gm24054-201ENSMUST00000158619 105 ntBASIC0.35□□□□□ -2.35
Traf1P39428 Gm26468-201ENSMUST00000158644 106 ntBASIC0.35□□□□□ -2.35
Traf1P39428 Gm27993-201ENSMUST00000184362 85 ntBASIC0.35□□□□□ -2.35
Traf1P39428 Gm37330-201ENSMUST00000192606 153 ntBASIC0.35□□□□□ -2.35
Traf1P39428 mt-Ta-201ENSMUST00000082398 69 ntBASIC0.35□□□□□ -2.35
Traf1P39428 Gm23969-201ENSMUST00000083324 74 ntBASIC0.35□□□□□ -2.35
Traf1P39428 Mir200a-201ENSMUST00000083466 90 ntBASIC0.35□□□□□ -2.35
Traf1P39428 Mir224-201ENSMUST00000083608 82 ntBASIC0.35□□□□□ -2.35
Traf1P39428 Gm21940-201ENSMUST00000204940 2278 ntBASIC0.34□□□□□ -2.35
Traf1P39428 Gm15654-201ENSMUST00000152660 300 ntBASIC0.34□□□□□ -2.36
Traf1P39428 Mir3094-201ENSMUST00000175121 64 ntBASIC0.34□□□□□ -2.36
Traf1P39428 Gm27465-201ENSMUST00000184290 91 ntBASIC0.34□□□□□ -2.36
Traf1P39428 Gm44807-201ENSMUST00000206115 154 ntBASIC0.34□□□□□ -2.36
Traf1P39428 Mir710-201ENSMUST00000102088 110 ntBASIC0.33□□□□□ -2.36
Traf1P39428 Gm23881-201ENSMUST00000116872 66 ntBASIC0.33□□□□□ -2.36
Traf1P39428 Gm26152-201ENSMUST00000157427 101 ntBASIC0.33□□□□□ -2.36
Traf1P39428 Gm22337-201ENSMUST00000157721 132 ntBASIC0.33□□□□□ -2.36
Traf1P39428 Gm24131-201ENSMUST00000158539 107 ntBASIC0.33□□□□□ -2.36
Traf1P39428 Gm27475-201ENSMUST00000183420 61 ntBASIC0.33□□□□□ -2.36
Traf1P39428 Mir7065-201ENSMUST00000185110 61 ntBASIC0.33□□□□□ -2.36
Traf1P39428 Gm37746-201ENSMUST00000193249 198 ntBASIC0.33□□□□□ -2.36
Traf1P39428 Mir30f-201ENSMUST00000196073 92 ntBASIC0.33□□□□□ -2.36
Traf1P39428 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.33□□□□□ -2.36
Traf1P39428 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
Traf1P39428 Gm23445-201ENSMUST00000082800 107 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 151.9 ms