Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Mir6369-201ENSMUST00000183772 106 ntBASIC2.27□□□□□ -2.05
RaraP11416 Gm44408-201ENSMUST00000200205 66 ntBASIC2.27□□□□□ -2.05
RaraP11416 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.26□□□□□ -2.05
RaraP11416 Snord87-201ENSMUST00000175437 87 ntBASIC2.26□□□□□ -2.05
RaraP11416 Mir6237-201ENSMUST00000183808 91 ntBASIC2.26□□□□□ -2.05
RaraP11416 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC2.26□□□□□ -2.05
RaraP11416 Mir30f-201ENSMUST00000196073 92 ntBASIC2.26□□□□□ -2.05
RaraP11416 Gm23299-201ENSMUST00000082708 79 ntBASIC2.26□□□□□ -2.05
RaraP11416 Gm23347-201ENSMUST00000083823 82 ntBASIC2.26□□□□□ -2.05
RaraP11416 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
RaraP11416 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
RaraP11416 Mir764-201ENSMUST00000103259 108 ntBASIC2.25□□□□□ -2.05
RaraP11416 Gm23917-201ENSMUST00000175256 98 ntBASIC2.25□□□□□ -2.05
RaraP11416 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC2.25□□□□□ -2.05
RaraP11416 mt-Tc-201ENSMUST00000082400 66 ntBASIC2.25□□□□□ -2.05
RaraP11416 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.25□□□□□ -2.05
RaraP11416 Mir107-201ENSMUST00000083660 87 ntBASIC2.25□□□□□ -2.05
RaraP11416 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.25□□□□□ -2.05
RaraP11416 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
RaraP11416 Gm24237-201ENSMUST00000157790 132 ntBASIC2.24□□□□□ -2.05
RaraP11416 Gm22159-201ENSMUST00000158412 130 ntBASIC2.24□□□□□ -2.05
RaraP11416 Snora24-201ENSMUST00000174989 130 ntBASIC2.24□□□□□ -2.05
RaraP11416 Mir3057-201ENSMUST00000175040 91 ntBASIC2.24□□□□□ -2.05
RaraP11416 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC2.24□□□□□ -2.05
RaraP11416 Mir6406-201ENSMUST00000183592 120 ntBASIC2.24□□□□□ -2.05
RaraP11416 Gm28256-201ENSMUST00000188953 139 ntBASIC2.24□□□□□ -2.05
RaraP11416 Gm28559-201ENSMUST00000190532 139 ntBASIC2.24□□□□□ -2.05
RaraP11416 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
RaraP11416 Mir20b-201ENSMUST00000102087 80 ntBASIC2.23□□□□□ -2.05
RaraP11416 Gm26015-201ENSMUST00000104402 125 ntBASIC2.23□□□□□ -2.05
RaraP11416 Gm22200-201ENSMUST00000158614 67 ntBASIC2.23□□□□□ -2.05
RaraP11416 Gm25838-201ENSMUST00000158920 120 ntBASIC2.23□□□□□ -2.05
RaraP11416 Gm23714-201ENSMUST00000179259 105 ntBASIC2.23□□□□□ -2.05
RaraP11416 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC2.23□□□□□ -2.05
RaraP11416 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC2.23□□□□□ -2.05
RaraP11416 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC2.23□□□□□ -2.05
RaraP11416 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC2.23□□□□□ -2.05
RaraP11416 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC2.23□□□□□ -2.05
RaraP11416 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC2.23□□□□□ -2.05
RaraP11416 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC2.23□□□□□ -2.05
RaraP11416 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC2.23□□□□□ -2.05
RaraP11416 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC2.23□□□□□ -2.05
RaraP11416 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC2.23□□□□□ -2.05
RaraP11416 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
RaraP11416 Gm24509-201ENSMUST00000157086 101 ntBASIC2.22□□□□□ -2.05
RaraP11416 Gm25358-201ENSMUST00000157189 101 ntBASIC2.22□□□□□ -2.05
RaraP11416 Gm23342-201ENSMUST00000158958 115 ntBASIC2.22□□□□□ -2.05
RaraP11416 Mir7016-201ENSMUST00000184308 72 ntBASIC2.22□□□□□ -2.05
RaraP11416 Gm37557-201ENSMUST00000191640 139 ntBASIC2.22□□□□□ -2.05
RaraP11416 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
RaraP11416 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
RaraP11416 Gm25899-201ENSMUST00000082672 141 ntBASIC2.21□□□□□ -2.06
RaraP11416 Gm25038-201ENSMUST00000082928 130 ntBASIC2.21□□□□□ -2.06
RaraP11416 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
RaraP11416 Gm22554-201ENSMUST00000157798 147 ntBASIC2.2□□□□□ -2.06
RaraP11416 Mir5104-201ENSMUST00000175319 94 ntBASIC2.2□□□□□ -2.06
RaraP11416 Gm24575-201ENSMUST00000175502 77 ntBASIC2.2□□□□□ -2.06
RaraP11416 Gm26398-201ENSMUST00000179015 127 ntBASIC2.2□□□□□ -2.06
RaraP11416 Gm27399-201ENSMUST00000184250 78 ntBASIC2.2□□□□□ -2.06
RaraP11416 Mir7226-201ENSMUST00000184953 60 ntBASIC2.2□□□□□ -2.06
RaraP11416 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.2□□□□□ -2.06
RaraP11416 Gm20108-201ENSMUST00000219977 153 ntBASIC2.2□□□□□ -2.06
RaraP11416 Gm26441-201ENSMUST00000082590 104 ntBASIC2.2□□□□□ -2.06
RaraP11416 Mir30d-201ENSMUST00000083503 82 ntBASIC2.2□□□□□ -2.06
RaraP11416 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
RaraP11416 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
RaraP11416 Gm24288-201ENSMUST00000157630 144 ntBASIC2.19□□□□□ -2.06
RaraP11416 Gm24637-201ENSMUST00000158674 85 ntBASIC2.19□□□□□ -2.06
RaraP11416 Gm25368-201ENSMUST00000158847 131 ntBASIC2.19□□□□□ -2.06
RaraP11416 Gm27898-201ENSMUST00000183987 80 ntBASIC2.19□□□□□ -2.06
RaraP11416 Gm20118-201ENSMUST00000187207 162 ntBASIC2.19□□□□□ -2.06
RaraP11416 Mir7217-201ENSMUST00000200304 62 ntBASIC2.19□□□□□ -2.06
RaraP11416 Gm24527-201ENSMUST00000082920 107 ntBASIC2.19□□□□□ -2.06
RaraP11416 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
RaraP11416 Gm26080-201ENSMUST00000104069 131 ntBASIC2.18□□□□□ -2.06
RaraP11416 Gm22803-201ENSMUST00000158049 283 ntBASIC2.18□□□□□ -2.06
RaraP11416 Gm24177-201ENSMUST00000158927 131 ntBASIC2.18□□□□□ -2.06
RaraP11416 mt-Tn-201ENSMUST00000082399 71 ntBASIC2.18□□□□□ -2.06
RaraP11416 Gm23344-201ENSMUST00000083818 68 ntBASIC2.18□□□□□ -2.06
RaraP11416 Mir532-201ENSMUST00000093630 96 ntBASIC2.18□□□□□ -2.06
RaraP11416 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
RaraP11416 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RaraP11416 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
RaraP11416 Gm25496-201ENSMUST00000104430 120 ntBASIC2.17□□□□□ -2.06
RaraP11416 Gm22494-201ENSMUST00000104495 128 ntBASIC2.17□□□□□ -2.06
RaraP11416 Gm23468-201ENSMUST00000157125 108 ntBASIC2.17□□□□□ -2.06
RaraP11416 Gm22605-201ENSMUST00000158289 108 ntBASIC2.17□□□□□ -2.06
RaraP11416 Gm24946-201ENSMUST00000158332 106 ntBASIC2.17□□□□□ -2.06
RaraP11416 Gm26290-201ENSMUST00000158891 145 ntBASIC2.17□□□□□ -2.06
RaraP11416 Gm25618-201ENSMUST00000179484 107 ntBASIC2.17□□□□□ -2.06
RaraP11416 Gm44477-201ENSMUST00000199661 110 ntBASIC2.17□□□□□ -2.06
RaraP11416 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.17□□□□□ -2.06
RaraP11416 Gm24203-201ENSMUST00000082949 114 ntBASIC2.17□□□□□ -2.06
RaraP11416 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
RaraP11416 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC2.16□□□□□ -2.06
RaraP11416 Gm12941-201ENSMUST00000117934 220 ntBASIC2.16□□□□□ -2.06
RaraP11416 Gm16307-201ENSMUST00000161269 210 ntBASIC2.16□□□□□ -2.06
RaraP11416 Gm22403-201ENSMUST00000174919 84 ntBASIC2.16□□□□□ -2.06
RaraP11416 Gm26154-201ENSMUST00000102339 96 ntBASIC2.15□□□□□ -2.07
RaraP11416 Gm14039-201ENSMUST00000118705 101 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 150.2 ms