Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Mir3108-201ENSMUST00000175500 79 ntBASIC0.19□□□□□ -2.38
NefmP08553 Gm23003-201ENSMUST00000179948 107 ntBASIC0.19□□□□□ -2.38
NefmP08553 Snord60-201ENSMUST00000082834 78 ntBASIC0.18□□□□□ -2.38
NefmP08553 Gm25509-201ENSMUST00000116985 106 ntBASIC0.17□□□□□ -2.38
NefmP08553 Gm22079-201ENSMUST00000157592 106 ntBASIC0.17□□□□□ -2.38
NefmP08553 Gm23180-201ENSMUST00000158686 125 ntBASIC0.17□□□□□ -2.38
NefmP08553 Gm27943-201ENSMUST00000184844 116 ntBASIC0.17□□□□□ -2.38
NefmP08553 Mir377-201ENSMUST00000083504 68 ntBASIC0.17□□□□□ -2.38
NefmP08553 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.17□□□□□ -2.38
NefmP08553 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
NefmP08553 Mir669f-201ENSMUST00000103850 121 ntBASIC0.16□□□□□ -2.38
NefmP08553 Gm26360-201ENSMUST00000158872 103 ntBASIC0.16□□□□□ -2.38
NefmP08553 Gm24321-201ENSMUST00000175348 80 ntBASIC0.16□□□□□ -2.38
NefmP08553 Gm23141-201ENSMUST00000178682 94 ntBASIC0.16□□□□□ -2.38
NefmP08553 Mir6342-201ENSMUST00000183870 125 ntBASIC0.16□□□□□ -2.38
NefmP08553 Mir6928-201ENSMUST00000185166 70 ntBASIC0.16□□□□□ -2.38
NefmP08553 Mir6896-201ENSMUST00000198033 73 ntBASIC0.16□□□□□ -2.38
NefmP08553 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.16□□□□□ -2.38
NefmP08553 Gm25610-201ENSMUST00000104016 129 ntBASIC0.15□□□□□ -2.39
NefmP08553 Gm23881-201ENSMUST00000116872 66 ntBASIC0.15□□□□□ -2.39
NefmP08553 Gm22557-201ENSMUST00000157804 102 ntBASIC0.15□□□□□ -2.39
NefmP08553 Gm23994-201ENSMUST00000158059 88 ntBASIC0.15□□□□□ -2.39
NefmP08553 Gm24225-201ENSMUST00000158825 98 ntBASIC0.15□□□□□ -2.39
NefmP08553 Gm26158-201ENSMUST00000158973 119 ntBASIC0.15□□□□□ -2.39
NefmP08553 Gm23917-201ENSMUST00000175256 98 ntBASIC0.15□□□□□ -2.39
NefmP08553 Gm37116-201ENSMUST00000195161 147 ntBASIC0.15□□□□□ -2.39
NefmP08553 Gm44807-201ENSMUST00000206115 154 ntBASIC0.15□□□□□ -2.39
NefmP08553 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
NefmP08553 Gm25894-201ENSMUST00000083458 75 ntBASIC0.15□□□□□ -2.39
NefmP08553 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.15□□□□□ -2.39
NefmP08553 Mir489-201ENSMUST00000093599 107 ntBASIC0.15□□□□□ -2.39
NefmP08553 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.14□□□□□ -2.39
NefmP08553 AL606472.1-201ENSMUST00000224628 275 ntBASIC0.14□□□□□ -2.39
NefmP08553 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.13□□□□□ -2.39
NefmP08553 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.13□□□□□ -2.39
NefmP08553 Gm10548-202ENSMUST00000165672 272 ntBASIC0.13□□□□□ -2.39
NefmP08553 Gm27402-201ENSMUST00000183890 120 ntBASIC0.13□□□□□ -2.39
NefmP08553 Gm25141-201ENSMUST00000083177 107 ntBASIC0.13□□□□□ -2.39
NefmP08553 Gm23278-201ENSMUST00000157911 143 ntBASIC0.12□□□□□ -2.39
NefmP08553 Gm23545-201ENSMUST00000158205 104 ntBASIC0.12□□□□□ -2.39
NefmP08553 Gm37586-201ENSMUST00000193654 204 ntBASIC0.12□□□□□ -2.39
NefmP08553 Gm44469-201ENSMUST00000198558 79 ntBASIC0.12□□□□□ -2.39
NefmP08553 AC122320.1-201ENSMUST00000227233 105 ntBASIC0.12□□□□□ -2.39
NefmP08553 Snord82-201ENSMUST00000082889 70 ntBASIC0.12□□□□□ -2.39
NefmP08553 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.12□□□□□ -2.39
NefmP08553 Mir382-201ENSMUST00000083494 76 ntBASIC0.12□□□□□ -2.39
NefmP08553 Mir670-201ENSMUST00000102380 100 ntBASIC0.11□□□□□ -2.39
NefmP08553 Gm24278-201ENSMUST00000104239 127 ntBASIC0.11□□□□□ -2.39
NefmP08553 Gm23761-201ENSMUST00000158347 104 ntBASIC0.11□□□□□ -2.39
NefmP08553 Gm23857-201ENSMUST00000158379 111 ntBASIC0.11□□□□□ -2.39
NefmP08553 Gm23821-201ENSMUST00000158738 106 ntBASIC0.11□□□□□ -2.39
NefmP08553 Mir3105-201ENSMUST00000175480 85 ntBASIC0.11□□□□□ -2.39
NefmP08553 Gm25749-201ENSMUST00000175485 111 ntBASIC0.11□□□□□ -2.39
NefmP08553 Gm24761-201ENSMUST00000179589 127 ntBASIC0.11□□□□□ -2.39
NefmP08553 Mir8107-201ENSMUST00000184024 117 ntBASIC0.11□□□□□ -2.39
NefmP08553 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.11□□□□□ -2.39
NefmP08553 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC0.1□□□□□ -2.39
NefmP08553 Gm25693-201ENSMUST00000175443 85 ntBASIC0.1□□□□□ -2.39
NefmP08553 Gm26421-201ENSMUST00000104279 132 ntBASIC0.09□□□□□ -2.4
NefmP08553 Gm24238-201ENSMUST00000157792 98 ntBASIC0.09□□□□□ -2.4
NefmP08553 Gm22612-201ENSMUST00000158293 101 ntBASIC0.09□□□□□ -2.4
NefmP08553 Mir3089-201ENSMUST00000175350 84 ntBASIC0.09□□□□□ -2.4
NefmP08553 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.09□□□□□ -2.4
NefmP08553 Gm25497-201ENSMUST00000104425 132 ntBASIC0.08□□□□□ -2.4
NefmP08553 Gm24467-201ENSMUST00000157887 126 ntBASIC0.08□□□□□ -2.4
NefmP08553 Gm29535-201ENSMUST00000185723 109 ntBASIC0.08□□□□□ -2.4
NefmP08553 Gm28143-201ENSMUST00000191082 109 ntBASIC0.08□□□□□ -2.4
NefmP08553 Mir7657-201ENSMUST00000196051 57 ntBASIC0.08□□□□□ -2.4
NefmP08553 Gm5002-201ENSMUST00000207145 223 ntBASIC0.08□□□□□ -2.4
NefmP08553 AC154245.1-201ENSMUST00000224615 601 ntBASIC0.08□□□□□ -2.4
NefmP08553 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.07□□□□□ -2.4
NefmP08553 Gm14626-201ENSMUST00000117619 216 ntBASIC0.07□□□□□ -2.4
NefmP08553 Gm12469-201ENSMUST00000117623 207 ntBASIC0.07□□□□□ -2.4
NefmP08553 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.07□□□□□ -2.4
NefmP08553 Gm28001-201ENSMUST00000183561 117 ntBASIC0.07□□□□□ -2.4
NefmP08553 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.07□□□□□ -2.4
NefmP08553 Mir201-201ENSMUST00000083470 66 ntBASIC0.07□□□□□ -2.4
NefmP08553 Gm23772-201ENSMUST00000104433 102 ntBASIC0.06□□□□□ -2.4
NefmP08553 Mir3969-201ENSMUST00000197106 92 ntBASIC0.06□□□□□ -2.4
NefmP08553 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.06□□□□□ -2.4
NefmP08553 Gm25390-201ENSMUST00000157341 103 ntBASIC0.05□□□□□ -2.4
NefmP08553 Gm24290-201ENSMUST00000157634 96 ntBASIC0.05□□□□□ -2.4
NefmP08553 Gm23036-201ENSMUST00000157885 99 ntBASIC0.05□□□□□ -2.4
NefmP08553 Gm22541-201ENSMUST00000158165 127 ntBASIC0.05□□□□□ -2.4
NefmP08553 Gm44345-201ENSMUST00000199560 135 ntBASIC0.05□□□□□ -2.4
NefmP08553 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
NefmP08553 Mir20b-201ENSMUST00000102087 80 ntBASIC0.04□□□□□ -2.4
NefmP08553 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
NefmP08553 Gm25408-201ENSMUST00000104104 133 ntBASIC0.04□□□□□ -2.4
NefmP08553 Gm38208-201ENSMUST00000192476 114 ntBASIC0.04□□□□□ -2.4
NefmP08553 Mir1949-202ENSMUST00000199259 70 ntBASIC0.04□□□□□ -2.4
NefmP08553 Gm22048-201ENSMUST00000104721 89 ntBASIC0.03□□□□□ -2.4
NefmP08553 Mir1191-201ENSMUST00000116883 120 ntBASIC0.03□□□□□ -2.4
NefmP08553 Gm22148-201ENSMUST00000104445 107 ntBASIC0.02□□□□□ -2.41
NefmP08553 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.02□□□□□ -2.41
NefmP08553 Gm22951-201ENSMUST00000179471 107 ntBASIC0.02□□□□□ -2.41
NefmP08553 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.02□□□□□ -2.41
NefmP08553 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.02□□□□□ -2.41
NefmP08553 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.02□□□□□ -2.41
NefmP08553 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.02□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 170.2 ms