Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm25769-201ENSMUST00000158569 127 ntBASIC-0.62□□□□□ -2.51
Sdc4O35988 AC154552.1-201ENSMUST00000222969 202 ntBASIC-0.62□□□□□ -2.51
Sdc4O35988 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.62□□□□□ -2.51
Sdc4O35988 Mir20b-201ENSMUST00000102087 80 ntBASIC-0.63□□□□□ -2.51
Sdc4O35988 Gm14626-201ENSMUST00000117619 216 ntBASIC-0.63□□□□□ -2.51
Sdc4O35988 Gm26255-201ENSMUST00000122492 103 ntBASIC-0.63□□□□□ -2.51
Sdc4O35988 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.63□□□□□ -2.51
Sdc4O35988 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.63□□□□□ -2.51
Sdc4O35988 Gm23567-201ENSMUST00000178005 107 ntBASIC-0.63□□□□□ -2.51
Sdc4O35988 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
Sdc4O35988 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.63□□□□□ -2.51
Sdc4O35988 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC-0.63□□□□□ -2.51
Sdc4O35988 AC125374.2-201ENSMUST00000214278 162 ntBASIC-0.63□□□□□ -2.51
Sdc4O35988 Gm26202-201ENSMUST00000082910 65 ntBASIC-0.63□□□□□ -2.51
Sdc4O35988 Gm24640-201ENSMUST00000116949 126 ntBASIC-0.64□□□□□ -2.51
Sdc4O35988 Gm22626-201ENSMUST00000116990 126 ntBASIC-0.64□□□□□ -2.51
Sdc4O35988 Gm12686-201ENSMUST00000120546 397 ntBASIC-0.64□□□□□ -2.51
Sdc4O35988 Gm22100-201ENSMUST00000157926 63 ntBASIC-0.64□□□□□ -2.51
Sdc4O35988 Gm22966-201ENSMUST00000157957 129 ntBASIC-0.64□□□□□ -2.51
Sdc4O35988 Gm25329-201ENSMUST00000158041 126 ntBASIC-0.64□□□□□ -2.51
Sdc4O35988 Gm26287-201ENSMUST00000158887 81 ntBASIC-0.64□□□□□ -2.51
Sdc4O35988 Gm25756-201ENSMUST00000103990 136 ntBASIC-0.65□□□□□ -2.51
Sdc4O35988 Snord100-201ENSMUST00000116836 74 ntBASIC-0.65□□□□□ -2.51
Sdc4O35988 Gm22051-201ENSMUST00000117002 127 ntBASIC-0.65□□□□□ -2.51
Sdc4O35988 Gm22079-201ENSMUST00000157592 106 ntBASIC-0.65□□□□□ -2.51
Sdc4O35988 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.65□□□□□ -2.51
Sdc4O35988 Gm24737-201ENSMUST00000158861 100 ntBASIC-0.65□□□□□ -2.51
Sdc4O35988 Gm29512-201ENSMUST00000185544 315 ntBASIC-0.65□□□□□ -2.51
Sdc4O35988 AC167192.1-201ENSMUST00000225908 139 ntBASIC-0.65□□□□□ -2.51
Sdc4O35988 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.65□□□□□ -2.51
Sdc4O35988 Gm12924-201ENSMUST00000121747 318 ntBASIC-0.66□□□□□ -2.52
Sdc4O35988 Gm24381-201ENSMUST00000122697 104 ntBASIC-0.66□□□□□ -2.52
Sdc4O35988 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.66□□□□□ -2.52
Sdc4O35988 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.66□□□□□ -2.52
Sdc4O35988 Mir6904-201ENSMUST00000183443 67 ntBASIC-0.66□□□□□ -2.52
Sdc4O35988 Gm27317-201ENSMUST00000183533 95 ntBASIC-0.66□□□□□ -2.52
Sdc4O35988 Mir7657-201ENSMUST00000196051 57 ntBASIC-0.66□□□□□ -2.52
Sdc4O35988 Gm25793-201ENSMUST00000083287 107 ntBASIC-0.66□□□□□ -2.52
Sdc4O35988 Gm24223-201ENSMUST00000158827 90 ntBASIC-0.67□□□□□ -2.52
Sdc4O35988 Gm26160-201ENSMUST00000158965 63 ntBASIC-0.67□□□□□ -2.52
Sdc4O35988 Gm44468-201ENSMUST00000199516 105 ntBASIC-0.67□□□□□ -2.52
Sdc4O35988 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC-0.67□□□□□ -2.52
Sdc4O35988 Gm22364-201ENSMUST00000083097 98 ntBASIC-0.67□□□□□ -2.52
Sdc4O35988 Gm24762-201ENSMUST00000083689 104 ntBASIC-0.67□□□□□ -2.52
Sdc4O35988 Gm23661-201ENSMUST00000122630 87 ntBASIC-0.68□□□□□ -2.52
Sdc4O35988 Gm24073-201ENSMUST00000158177 106 ntBASIC-0.68□□□□□ -2.52
Sdc4O35988 Gm25935-201ENSMUST00000178746 107 ntBASIC-0.68□□□□□ -2.52
Sdc4O35988 Gm27585-201ENSMUST00000183717 199 ntBASIC-0.68□□□□□ -2.52
Sdc4O35988 Gm43927-201ENSMUST00000204599 117 ntBASIC-0.68□□□□□ -2.52
Sdc4O35988 Gm45688-201ENSMUST00000210002 101 ntBASIC-0.68□□□□□ -2.52
Sdc4O35988 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.68□□□□□ -2.52
Sdc4O35988 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-0.69□□□□□ -2.52
Sdc4O35988 Gm25610-201ENSMUST00000104016 129 ntBASIC-0.69□□□□□ -2.52
Sdc4O35988 Gm26290-201ENSMUST00000158891 145 ntBASIC-0.69□□□□□ -2.52
Sdc4O35988 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.69□□□□□ -2.52
Sdc4O35988 Gm45005-201ENSMUST00000206640 157 ntBASIC-0.69□□□□□ -2.52
Sdc4O35988 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.69□□□□□ -2.52
Sdc4O35988 Mir146-201ENSMUST00000083667 65 ntBASIC-0.69□□□□□ -2.52
Sdc4O35988 Gm22985-201ENSMUST00000122754 116 ntBASIC-0.7□□□□□ -2.52
Sdc4O35988 Gm24498-201ENSMUST00000158445 102 ntBASIC-0.7□□□□□ -2.52
Sdc4O35988 Gm25235-201ENSMUST00000179933 107 ntBASIC-0.7□□□□□ -2.52
Sdc4O35988 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC-0.7□□□□□ -2.52
Sdc4O35988 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC-0.7□□□□□ -2.52
Sdc4O35988 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC-0.7□□□□□ -2.52
Sdc4O35988 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC-0.7□□□□□ -2.52
Sdc4O35988 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC-0.7□□□□□ -2.52
Sdc4O35988 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC-0.7□□□□□ -2.52
Sdc4O35988 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC-0.7□□□□□ -2.52
Sdc4O35988 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC-0.7□□□□□ -2.52
Sdc4O35988 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC-0.7□□□□□ -2.52
Sdc4O35988 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC-0.7□□□□□ -2.52
Sdc4O35988 Gm26497-201ENSMUST00000083146 107 ntBASIC-0.7□□□□□ -2.52
Sdc4O35988 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-0.7□□□□□ -2.52
Sdc4O35988 Gm22557-201ENSMUST00000157804 102 ntBASIC-0.71□□□□□ -2.52
Sdc4O35988 Gm22448-201ENSMUST00000179254 107 ntBASIC-0.71□□□□□ -2.52
Sdc4O35988 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC-0.71□□□□□ -2.52
Sdc4O35988 Gm28927-201ENSMUST00000191528 272 ntBASIC-0.71□□□□□ -2.52
Sdc4O35988 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC-0.71□□□□□ -2.52
Sdc4O35988 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.71□□□□□ -2.52
Sdc4O35988 Gm24423-201ENSMUST00000101982 106 ntBASIC-0.72□□□□□ -2.52
Sdc4O35988 Mir669i-201ENSMUST00000117007 127 ntBASIC-0.72□□□□□ -2.52
Sdc4O35988 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.72□□□□□ -2.52
Sdc4O35988 Gm28489-201ENSMUST00000186655 316 ntBASIC-0.72□□□□□ -2.52
Sdc4O35988 Mir3969-201ENSMUST00000197106 92 ntBASIC-0.72□□□□□ -2.52
Sdc4O35988 Gm43381-201ENSMUST00000198553 165 ntBASIC-0.72□□□□□ -2.52
Sdc4O35988 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC-0.72□□□□□ -2.52
Sdc4O35988 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC-0.72□□□□□ -2.52
Sdc4O35988 Mir181a-1-201ENSMUST00000083631 87 ntBASIC-0.72□□□□□ -2.52
Sdc4O35988 Mir489-201ENSMUST00000093599 107 ntBASIC-0.72□□□□□ -2.52
Sdc4O35988 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC-0.73□□□□□ -2.53
Sdc4O35988 Gm42935-201ENSMUST00000202004 151 ntBASIC-0.73□□□□□ -2.53
Sdc4O35988 Mir9-2-201ENSMUST00000083490 72 ntBASIC-0.73□□□□□ -2.53
Sdc4O35988 Mir186-201ENSMUST00000083497 71 ntBASIC-0.73□□□□□ -2.53
Sdc4O35988 Mir183-201ENSMUST00000083685 70 ntBASIC-0.73□□□□□ -2.53
Sdc4O35988 Gm23654-201ENSMUST00000116758 126 ntBASIC-0.74□□□□□ -2.53
Sdc4O35988 Gm24894-201ENSMUST00000122744 118 ntBASIC-0.74□□□□□ -2.53
Sdc4O35988 Gm23242-201ENSMUST00000083055 107 ntBASIC-0.74□□□□□ -2.53
Sdc4O35988 Gm23941-201ENSMUST00000101953 107 ntBASIC-0.75□□□□□ -2.53
Sdc4O35988 Gm24238-201ENSMUST00000157792 98 ntBASIC-0.75□□□□□ -2.53
Sdc4O35988 Gm23219-201ENSMUST00000158123 87 ntBASIC-0.75□□□□□ -2.53
Retrieved 100 of 76,532 protein–RNA pairs in 182.6 ms