Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm23838-201ENSMUST00000158067 162 ntBASIC1.76□□□□□ -2.13
Pcdh1F7BJK1 Mir3061-201ENSMUST00000175129 91 ntBASIC1.76□□□□□ -2.13
Pcdh1F7BJK1 Gm22264-201ENSMUST00000178200 107 ntBASIC1.76□□□□□ -2.13
Pcdh1F7BJK1 Mir6995-201ENSMUST00000183658 71 ntBASIC1.76□□□□□ -2.13
Pcdh1F7BJK1 Mir6369-201ENSMUST00000183772 106 ntBASIC1.76□□□□□ -2.13
Pcdh1F7BJK1 Mir7021-201ENSMUST00000197026 63 ntBASIC1.76□□□□□ -2.13
Pcdh1F7BJK1 Gm25851-201ENSMUST00000082794 107 ntBASIC1.76□□□□□ -2.13
Pcdh1F7BJK1 Gm24805-201ENSMUST00000082931 104 ntBASIC1.76□□□□□ -2.13
Pcdh1F7BJK1 Gm14882-201ENSMUST00000117216 218 ntBASIC1.75□□□□□ -2.13
Pcdh1F7BJK1 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.75□□□□□ -2.13
Pcdh1F7BJK1 Gm23951-201ENSMUST00000104029 132 ntBASIC1.74□□□□□ -2.13
Pcdh1F7BJK1 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Pcdh1F7BJK1 Gm24509-201ENSMUST00000157086 101 ntBASIC1.74□□□□□ -2.13
Pcdh1F7BJK1 Gm25358-201ENSMUST00000157189 101 ntBASIC1.74□□□□□ -2.13
Pcdh1F7BJK1 Gm22706-201ENSMUST00000157907 112 ntBASIC1.74□□□□□ -2.13
Pcdh1F7BJK1 Gm23065-201ENSMUST00000158236 130 ntBASIC1.74□□□□□ -2.13
Pcdh1F7BJK1 Gm22129-201ENSMUST00000179034 107 ntBASIC1.74□□□□□ -2.13
Pcdh1F7BJK1 Gm5900-201ENSMUST00000179862 375 ntBASIC1.74□□□□□ -2.13
Pcdh1F7BJK1 Gm27443-201ENSMUST00000184660 98 ntBASIC1.74□□□□□ -2.13
Pcdh1F7BJK1 Mir30f-201ENSMUST00000196073 92 ntBASIC1.74□□□□□ -2.13
Pcdh1F7BJK1 Gm23100-201ENSMUST00000083455 141 ntBASIC1.74□□□□□ -2.13
Pcdh1F7BJK1 Gm26109-201ENSMUST00000083970 70 ntBASIC1.74□□□□□ -2.13
Pcdh1F7BJK1 AC140930.2-201ENSMUST00000221803 109 ntBASIC1.73□□□□□ -2.13
Pcdh1F7BJK1 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC1.73□□□□□ -2.13
Pcdh1F7BJK1 Gm23299-201ENSMUST00000082708 79 ntBASIC1.73□□□□□ -2.13
Pcdh1F7BJK1 Mir1a-1-201ENSMUST00000093635 77 ntBASIC1.73□□□□□ -2.13
Pcdh1F7BJK1 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.73□□□□□ -2.13
Pcdh1F7BJK1 Mir344e-201ENSMUST00000104677 66 ntBASIC1.72□□□□□ -2.13
Pcdh1F7BJK1 U6.1-201ENSMUST00000157443 101 ntBASIC1.72□□□□□ -2.13
Pcdh1F7BJK1 Gm22503-201ENSMUST00000158983 115 ntBASIC1.72□□□□□ -2.13
Pcdh1F7BJK1 Mir6901-201ENSMUST00000185062 62 ntBASIC1.72□□□□□ -2.13
Pcdh1F7BJK1 Gm22454-201ENSMUST00000082583 107 ntBASIC1.72□□□□□ -2.13
Pcdh1F7BJK1 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.72□□□□□ -2.13
Pcdh1F7BJK1 Mir20b-201ENSMUST00000102087 80 ntBASIC1.71□□□□□ -2.14
Pcdh1F7BJK1 Gm12941-201ENSMUST00000117934 220 ntBASIC1.71□□□□□ -2.14
Pcdh1F7BJK1 Gm27511-201ENSMUST00000183502 127 ntBASIC1.71□□□□□ -2.14
Pcdh1F7BJK1 AC132833.2-201ENSMUST00000228699 157 ntBASIC1.71□□□□□ -2.14
Pcdh1F7BJK1 Gm25038-201ENSMUST00000082928 130 ntBASIC1.71□□□□□ -2.14
Pcdh1F7BJK1 Gm22354-201ENSMUST00000083919 70 ntBASIC1.71□□□□□ -2.14
Pcdh1F7BJK1 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.7□□□□□ -2.14
Pcdh1F7BJK1 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.7□□□□□ -2.14
Pcdh1F7BJK1 Gm26369-201ENSMUST00000157825 100 ntBASIC1.7□□□□□ -2.14
Pcdh1F7BJK1 Gm23349-201ENSMUST00000158432 98 ntBASIC1.7□□□□□ -2.14
Pcdh1F7BJK1 Mir3569-201ENSMUST00000185080 58 ntBASIC1.7□□□□□ -2.14
Pcdh1F7BJK1 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC1.7□□□□□ -2.14
Pcdh1F7BJK1 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC1.7□□□□□ -2.14
Pcdh1F7BJK1 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC1.7□□□□□ -2.14
Pcdh1F7BJK1 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC1.7□□□□□ -2.14
Pcdh1F7BJK1 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC1.7□□□□□ -2.14
Pcdh1F7BJK1 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC1.7□□□□□ -2.14
Pcdh1F7BJK1 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC1.7□□□□□ -2.14
Pcdh1F7BJK1 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC1.7□□□□□ -2.14
Pcdh1F7BJK1 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC1.7□□□□□ -2.14
Pcdh1F7BJK1 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC1.7□□□□□ -2.14
Pcdh1F7BJK1 Gm22827-201ENSMUST00000083766 107 ntBASIC1.7□□□□□ -2.14
Pcdh1F7BJK1 Mir532-201ENSMUST00000093630 96 ntBASIC1.7□□□□□ -2.14
Pcdh1F7BJK1 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Pcdh1F7BJK1 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Pcdh1F7BJK1 Gm22679-201ENSMUST00000116975 100 ntBASIC1.69□□□□□ -2.14
Pcdh1F7BJK1 Gm25423-201ENSMUST00000157609 107 ntBASIC1.69□□□□□ -2.14
Pcdh1F7BJK1 Mir7226-201ENSMUST00000184953 60 ntBASIC1.69□□□□□ -2.14
Pcdh1F7BJK1 Gm20118-201ENSMUST00000187207 162 ntBASIC1.69□□□□□ -2.14
Pcdh1F7BJK1 Gm37778-201ENSMUST00000191732 190 ntBASIC1.69□□□□□ -2.14
Pcdh1F7BJK1 Trbv25-201ENSMUST00000194700 273 ntBASIC1.69□□□□□ -2.14
Pcdh1F7BJK1 AC122327.1-201ENSMUST00000220778 108 ntBASIC1.69□□□□□ -2.14
Pcdh1F7BJK1 AC159093.2-201ENSMUST00000227881 297 ntBASIC1.69□□□□□ -2.14
Pcdh1F7BJK1 Gm25681-201ENSMUST00000083938 106 ntBASIC1.69□□□□□ -2.14
Pcdh1F7BJK1 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Pcdh1F7BJK1 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Pcdh1F7BJK1 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Pcdh1F7BJK1 Mir3096-201ENSMUST00000116685 71 ntBASIC1.68□□□□□ -2.14
Pcdh1F7BJK1 Gm14039-201ENSMUST00000118705 101 ntBASIC1.68□□□□□ -2.14
Pcdh1F7BJK1 Gm23261-201ENSMUST00000158316 136 ntBASIC1.68□□□□□ -2.14
Pcdh1F7BJK1 Mir6406-201ENSMUST00000183592 120 ntBASIC1.68□□□□□ -2.14
Pcdh1F7BJK1 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.68□□□□□ -2.14
Pcdh1F7BJK1 Gm24165-201ENSMUST00000082718 128 ntBASIC1.68□□□□□ -2.14
Pcdh1F7BJK1 Mir322-201ENSMUST00000083484 95 ntBASIC1.68□□□□□ -2.14
Pcdh1F7BJK1 Mir222-201ENSMUST00000083537 79 ntBASIC1.68□□□□□ -2.14
Pcdh1F7BJK1 Mir30c-2-201ENSMUST00000083633 84 ntBASIC1.68□□□□□ -2.14
Pcdh1F7BJK1 Gm25337-201ENSMUST00000083723 104 ntBASIC1.68□□□□□ -2.14
Pcdh1F7BJK1 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Pcdh1F7BJK1 Gm23763-201ENSMUST00000158345 60 ntBASIC1.67□□□□□ -2.14
Pcdh1F7BJK1 Gm16307-201ENSMUST00000161269 210 ntBASIC1.67□□□□□ -2.14
Pcdh1F7BJK1 Gm22914-201ENSMUST00000175195 77 ntBASIC1.67□□□□□ -2.14
Pcdh1F7BJK1 Gm24575-201ENSMUST00000175502 77 ntBASIC1.67□□□□□ -2.14
Pcdh1F7BJK1 Mir6997-201ENSMUST00000184313 71 ntBASIC1.67□□□□□ -2.14
Pcdh1F7BJK1 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.67□□□□□ -2.14
Pcdh1F7BJK1 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.67□□□□□ -2.14
Pcdh1F7BJK1 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Pcdh1F7BJK1 Mir764-201ENSMUST00000103259 108 ntBASIC1.66□□□□□ -2.14
Pcdh1F7BJK1 Mir544-201ENSMUST00000103813 78 ntBASIC1.66□□□□□ -2.14
Pcdh1F7BJK1 Gm22802-201ENSMUST00000175621 89 ntBASIC1.66□□□□□ -2.14
Pcdh1F7BJK1 Gm24801-201ENSMUST00000178503 105 ntBASIC1.66□□□□□ -2.14
Pcdh1F7BJK1 Gm26398-201ENSMUST00000179015 127 ntBASIC1.66□□□□□ -2.14
Pcdh1F7BJK1 Mir7017-201ENSMUST00000184894 62 ntBASIC1.66□□□□□ -2.14
Pcdh1F7BJK1 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.66□□□□□ -2.14
Pcdh1F7BJK1 Gm45265-201ENSMUST00000210852 2497 ntBASIC1.65□□□□□ -2.14
Pcdh1F7BJK1 Gm22672-201ENSMUST00000104414 134 ntBASIC1.65□□□□□ -2.15
Pcdh1F7BJK1 Gm22033-201ENSMUST00000116947 90 ntBASIC1.65□□□□□ -2.15
Pcdh1F7BJK1 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC1.65□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 143.9 ms