Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Gm22732-201ENSMUST00000158093 121 ntBASIC-1.66□□□□□ -2.68
Trav12-1A0N8R1 Gm24223-201ENSMUST00000158827 90 ntBASIC-1.66□□□□□ -2.68
Trav12-1A0N8R1 Gm23660-201ENSMUST00000178362 79 ntBASIC-1.66□□□□□ -2.68
Trav12-1A0N8R1 Gm24088-201ENSMUST00000179100 79 ntBASIC-1.66□□□□□ -2.68
Trav12-1A0N8R1 Mir7055-201ENSMUST00000197423 59 ntBASIC-1.66□□□□□ -2.68
Trav12-1A0N8R1 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC-1.66□□□□□ -2.68
Trav12-1A0N8R1 Gm19248-201ENSMUST00000209404 110 ntBASIC-1.66□□□□□ -2.68
Trav12-1A0N8R1 Gm45402-201ENSMUST00000211796 223 ntBASIC-1.66□□□□□ -2.68
Trav12-1A0N8R1 Gm25296-201ENSMUST00000082566 67 ntBASIC-1.66□□□□□ -2.68
Trav12-1A0N8R1 Gm23423-201ENSMUST00000082782 106 ntBASIC-1.66□□□□□ -2.68
Trav12-1A0N8R1 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.66□□□□□ -2.68
Trav12-1A0N8R1 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC-1.67□□□□□ -2.68
Trav12-1A0N8R1 Snord8-201ENSMUST00000175303 110 ntBASIC-1.67□□□□□ -2.68
Trav12-1A0N8R1 Gm25314-201ENSMUST00000178810 79 ntBASIC-1.67□□□□□ -2.68
Trav12-1A0N8R1 Gm26180-201ENSMUST00000179942 107 ntBASIC-1.67□□□□□ -2.68
Trav12-1A0N8R1 Gm27297-201ENSMUST00000183395 105 ntBASIC-1.67□□□□□ -2.68
Trav12-1A0N8R1 Gm44811-201ENSMUST00000209120 228 ntBASIC-1.67□□□□□ -2.68
Trav12-1A0N8R1 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-1.67□□□□□ -2.68
Trav12-1A0N8R1 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-1.68□□□□□ -2.68
Trav12-1A0N8R1 AC158982.2-201ENSMUST00000226283 184 ntBASIC-1.68□□□□□ -2.68
Trav12-1A0N8R1 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-1.69□□□□□ -2.68
Trav12-1A0N8R1 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC-1.69□□□□□ -2.68
Trav12-1A0N8R1 Gm25848-201ENSMUST00000116790 144 ntBASIC-1.69□□□□□ -2.68
Trav12-1A0N8R1 Gm11936-201ENSMUST00000118323 160 ntBASIC-1.69□□□□□ -2.68
Trav12-1A0N8R1 Gm14574-201ENSMUST00000120644 279 ntBASIC-1.69□□□□□ -2.68
Trav12-1A0N8R1 Gm22598-201ENSMUST00000157600 127 ntBASIC-1.69□□□□□ -2.68
Trav12-1A0N8R1 Gm22433-201ENSMUST00000158550 142 ntBASIC-1.69□□□□□ -2.68
Trav12-1A0N8R1 Gm37796-201ENSMUST00000195327 134 ntBASIC-1.69□□□□□ -2.68
Trav12-1A0N8R1 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.69□□□□□ -2.68
Trav12-1A0N8R1 Gm25579-201ENSMUST00000083407 106 ntBASIC-1.69□□□□□ -2.68
Trav12-1A0N8R1 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC-1.7□□□□□ -2.68
Trav12-1A0N8R1 Gm26018-201ENSMUST00000104406 128 ntBASIC-1.7□□□□□ -2.68
Trav12-1A0N8R1 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-1.7□□□□□ -2.68
Trav12-1A0N8R1 Gm14766-201ENSMUST00000121689 367 ntBASIC-1.7□□□□□ -2.68
Trav12-1A0N8R1 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC-1.7□□□□□ -2.68
Trav12-1A0N8R1 Gm27672-201ENSMUST00000183751 204 ntBASIC-1.7□□□□□ -2.68
Trav12-1A0N8R1 Gm27944-201ENSMUST00000185155 103 ntBASIC-1.7□□□□□ -2.68
Trav12-1A0N8R1 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC-1.7□□□□□ -2.68
Trav12-1A0N8R1 Gm25056-201ENSMUST00000157372 62 ntBASIC-1.71□□□□□ -2.68
Trav12-1A0N8R1 Gm23474-201ENSMUST00000158884 75 ntBASIC-1.71□□□□□ -2.68
Trav12-1A0N8R1 Gm23216-201ENSMUST00000179545 107 ntBASIC-1.71□□□□□ -2.68
Trav12-1A0N8R1 Gm23186-201ENSMUST00000180078 107 ntBASIC-1.71□□□□□ -2.68
Trav12-1A0N8R1 Gm44959-201ENSMUST00000209127 231 ntBASIC-1.71□□□□□ -2.68
Trav12-1A0N8R1 Gm25142-201ENSMUST00000082698 107 ntBASIC-1.71□□□□□ -2.68
Trav12-1A0N8R1 Mir582-201ENSMUST00000103758 81 ntBASIC-1.72□□□□□ -2.68
Trav12-1A0N8R1 Gm24111-201ENSMUST00000175491 97 ntBASIC-1.72□□□□□ -2.68
Trav12-1A0N8R1 Mir7057-201ENSMUST00000184685 58 ntBASIC-1.72□□□□□ -2.68
Trav12-1A0N8R1 Gm37763-201ENSMUST00000193445 120 ntBASIC-1.72□□□□□ -2.68
Trav12-1A0N8R1 Gm7240-201ENSMUST00000220769 664 ntBASIC-1.72□□□□□ -2.68
Trav12-1A0N8R1 Mir496a-201ENSMUST00000093627 79 ntBASIC-1.72□□□□□ -2.68
Trav12-1A0N8R1 Gm22332-201ENSMUST00000158072 126 ntBASIC-1.73□□□□□ -2.69
Trav12-1A0N8R1 Gm25769-201ENSMUST00000158569 127 ntBASIC-1.73□□□□□ -2.69
Trav12-1A0N8R1 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.73□□□□□ -2.69
Trav12-1A0N8R1 Gm27977-201ENSMUST00000185159 111 ntBASIC-1.73□□□□□ -2.69
Trav12-1A0N8R1 Mir669o-201ENSMUST00000103898 96 ntBASIC-1.74□□□□□ -2.69
Trav12-1A0N8R1 Gm11322-201ENSMUST00000118095 435 ntBASIC-1.74□□□□□ -2.69
Trav12-1A0N8R1 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC-1.74□□□□□ -2.69
Trav12-1A0N8R1 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC-1.74□□□□□ -2.69
Trav12-1A0N8R1 Gm23191-201ENSMUST00000179147 107 ntBASIC-1.74□□□□□ -2.69
Trav12-1A0N8R1 Mir6336-201ENSMUST00000183581 130 ntBASIC-1.74□□□□□ -2.69
Trav12-1A0N8R1 Mir7657-201ENSMUST00000196051 57 ntBASIC-1.74□□□□□ -2.69
Trav12-1A0N8R1 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC-1.74□□□□□ -2.69
Trav12-1A0N8R1 CT025526.1-201ENSMUST00000217327 267 ntBASIC-1.74□□□□□ -2.69
Trav12-1A0N8R1 Gm26438-201ENSMUST00000082593 107 ntBASIC-1.74□□□□□ -2.69
Trav12-1A0N8R1 Gm25629-201ENSMUST00000084001 107 ntBASIC-1.74□□□□□ -2.69
Trav12-1A0N8R1 Gm25275-201ENSMUST00000104297 129 ntBASIC-1.75□□□□□ -2.69
Trav12-1A0N8R1 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC-1.75□□□□□ -2.69
Trav12-1A0N8R1 Mir3535-201ENSMUST00000197651 147 ntBASIC-1.75□□□□□ -2.69
Trav12-1A0N8R1 AC132918.1-201ENSMUST00000227877 925 ntBASIC-1.75□□□□□ -2.69
Trav12-1A0N8R1 n-R5s94-201ENSMUST00000082573 119 ntBASIC-1.75□□□□□ -2.69
Trav12-1A0N8R1 Gm22686-201ENSMUST00000082847 100 ntBASIC-1.75□□□□□ -2.69
Trav12-1A0N8R1 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.76□□□□□ -2.69
Trav12-1A0N8R1 Gm25507-201ENSMUST00000116981 144 ntBASIC-1.76□□□□□ -2.69
Trav12-1A0N8R1 Gm23892-201ENSMUST00000158105 130 ntBASIC-1.76□□□□□ -2.69
Trav12-1A0N8R1 Gm28849-201ENSMUST00000188127 174 ntBASIC-1.76□□□□□ -2.69
Trav12-1A0N8R1 Ighv15-1-201ENSMUST00000194450 276 ntBASIC-1.76□□□□□ -2.69
Trav12-1A0N8R1 AC145736.2-201ENSMUST00000216305 365 ntBASIC-1.76□□□□□ -2.69
Trav12-1A0N8R1 Gm29818-201ENSMUST00000218070 165 ntBASIC-1.76□□□□□ -2.69
Trav12-1A0N8R1 Gm23982-201ENSMUST00000157141 106 ntBASIC-1.77□□□□□ -2.69
Trav12-1A0N8R1 Gm24238-201ENSMUST00000157792 98 ntBASIC-1.77□□□□□ -2.69
Trav12-1A0N8R1 Snord2-201ENSMUST00000157899 69 ntBASIC-1.77□□□□□ -2.69
Trav12-1A0N8R1 Gm27957-201ENSMUST00000184054 127 ntBASIC-1.77□□□□□ -2.69
Trav12-1A0N8R1 Gm44395-201ENSMUST00000197056 153 ntBASIC-1.77□□□□□ -2.69
Trav12-1A0N8R1 Gm22287-201ENSMUST00000083197 107 ntBASIC-1.77□□□□□ -2.69
Trav12-1A0N8R1 Gm25329-201ENSMUST00000158041 126 ntBASIC-1.78□□□□□ -2.69
Trav12-1A0N8R1 Gm25656-201ENSMUST00000158466 66 ntBASIC-1.78□□□□□ -2.69
Trav12-1A0N8R1 Gm45429-201ENSMUST00000209527 172 ntBASIC-1.78□□□□□ -2.69
Trav12-1A0N8R1 Gm23242-201ENSMUST00000083055 107 ntBASIC-1.78□□□□□ -2.69
Trav12-1A0N8R1 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC-1.78□□□□□ -2.69
Trav12-1A0N8R1 Mir717-201ENSMUST00000102259 109 ntBASIC-1.79□□□□□ -2.7
Trav12-1A0N8R1 Gm11694-201ENSMUST00000118637 159 ntBASIC-1.79□□□□□ -2.7
Trav12-1A0N8R1 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC-1.79□□□□□ -2.7
Trav12-1A0N8R1 Gm24971-201ENSMUST00000175581 110 ntBASIC-1.79□□□□□ -2.7
Trav12-1A0N8R1 Gm23726-201ENSMUST00000178937 67 ntBASIC-1.79□□□□□ -2.7
Trav12-1A0N8R1 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC-1.8□□□□□ -2.7
Trav12-1A0N8R1 Gm25875-201ENSMUST00000104323 107 ntBASIC-1.8□□□□□ -2.7
Trav12-1A0N8R1 Gm26482-201ENSMUST00000158015 62 ntBASIC-1.8□□□□□ -2.7
Trav12-1A0N8R1 Gm26400-201ENSMUST00000175012 85 ntBASIC-1.8□□□□□ -2.7
Trav12-1A0N8R1 Gm23812-201ENSMUST00000175156 84 ntBASIC-1.8□□□□□ -2.7
Trav12-1A0N8R1 Gm23374-201ENSMUST00000175408 84 ntBASIC-1.8□□□□□ -2.7
Retrieved 100 of 76,532 protein–RNA pairs in 178.9 ms