Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC0.83□□□□□ -2.28
H2afb1S4R1E0 Gm18502-201ENSMUST00000218679 199 ntBASIC0.83□□□□□ -2.28
H2afb1S4R1E0 Gm10172-201ENSMUST00000085929 558 ntBASIC0.83□□□□□ -2.28
H2afb1S4R1E0 Gm25060-201ENSMUST00000157374 130 ntBASIC0.82□□□□□ -2.28
H2afb1S4R1E0 Gm22515-201ENSMUST00000158273 305 ntBASIC0.82□□□□□ -2.28
H2afb1S4R1E0 Gm25768-201ENSMUST00000158570 98 ntBASIC0.82□□□□□ -2.28
H2afb1S4R1E0 Gm25241-201ENSMUST00000174909 84 ntBASIC0.82□□□□□ -2.28
H2afb1S4R1E0 Gm26217-201ENSMUST00000175212 84 ntBASIC0.82□□□□□ -2.28
H2afb1S4R1E0 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
H2afb1S4R1E0 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.82□□□□□ -2.28
H2afb1S4R1E0 Gm8508-201ENSMUST00000061226 363 ntBASIC0.82□□□□□ -2.28
H2afb1S4R1E0 Mir324-201ENSMUST00000083600 89 ntBASIC0.82□□□□□ -2.28
H2afb1S4R1E0 Mir489-201ENSMUST00000093599 107 ntBASIC0.82□□□□□ -2.28
H2afb1S4R1E0 Gm22689-201ENSMUST00000102452 110 ntBASIC0.81□□□□□ -2.28
H2afb1S4R1E0 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC0.81□□□□□ -2.28
H2afb1S4R1E0 Gm22815-201ENSMUST00000157451 62 ntBASIC0.81□□□□□ -2.28
H2afb1S4R1E0 Gm22801-201ENSMUST00000175624 84 ntBASIC0.81□□□□□ -2.28
H2afb1S4R1E0 Gm43381-201ENSMUST00000198553 165 ntBASIC0.81□□□□□ -2.28
H2afb1S4R1E0 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.81□□□□□ -2.28
H2afb1S4R1E0 Gm25611-201ENSMUST00000104017 133 ntBASIC0.8□□□□□ -2.28
H2afb1S4R1E0 Gm23011-201ENSMUST00000104148 132 ntBASIC0.8□□□□□ -2.28
H2afb1S4R1E0 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.8□□□□□ -2.28
H2afb1S4R1E0 Gm24575-201ENSMUST00000175502 77 ntBASIC0.8□□□□□ -2.28
H2afb1S4R1E0 Gm38113-201ENSMUST00000193704 201 ntBASIC0.8□□□□□ -2.28
H2afb1S4R1E0 Mir3969-201ENSMUST00000197106 92 ntBASIC0.8□□□□□ -2.28
H2afb1S4R1E0 AC168880.2-201ENSMUST00000224488 201 ntBASIC0.8□□□□□ -2.28
H2afb1S4R1E0 Gm25636-201ENSMUST00000082666 133 ntBASIC0.8□□□□□ -2.28
H2afb1S4R1E0 Mir532-201ENSMUST00000093630 96 ntBASIC0.8□□□□□ -2.28
H2afb1S4R1E0 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC0.79□□□□□ -2.28
H2afb1S4R1E0 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
H2afb1S4R1E0 Gm25110-201ENSMUST00000116684 121 ntBASIC0.79□□□□□ -2.28
H2afb1S4R1E0 Gm25775-201ENSMUST00000116716 121 ntBASIC0.79□□□□□ -2.28
H2afb1S4R1E0 Gm24795-201ENSMUST00000116737 121 ntBASIC0.79□□□□□ -2.28
H2afb1S4R1E0 Gm25171-201ENSMUST00000116926 121 ntBASIC0.79□□□□□ -2.28
H2afb1S4R1E0 Gm25968-201ENSMUST00000157167 100 ntBASIC0.79□□□□□ -2.28
H2afb1S4R1E0 Mir3087-201ENSMUST00000199405 56 ntBASIC0.79□□□□□ -2.28
H2afb1S4R1E0 Gm24616-201ENSMUST00000083274 139 ntBASIC0.79□□□□□ -2.28
H2afb1S4R1E0 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.79□□□□□ -2.28
H2afb1S4R1E0 Gm23337-201ENSMUST00000158959 118 ntBASIC0.78□□□□□ -2.28
H2afb1S4R1E0 Gm27446-201ENSMUST00000183963 89 ntBASIC0.78□□□□□ -2.28
H2afb1S4R1E0 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.78□□□□□ -2.28
H2afb1S4R1E0 Gm23377-201ENSMUST00000082943 126 ntBASIC0.78□□□□□ -2.28
H2afb1S4R1E0 Gm23509-201ENSMUST00000083080 160 ntBASIC0.78□□□□□ -2.28
H2afb1S4R1E0 Mir669b-201ENSMUST00000102172 97 ntBASIC0.77□□□□□ -2.29
H2afb1S4R1E0 Scarna9-201ENSMUST00000104318 70 ntBASIC0.77□□□□□ -2.29
H2afb1S4R1E0 Snord90-201ENSMUST00000104568 111 ntBASIC0.77□□□□□ -2.29
H2afb1S4R1E0 Gm23253-201ENSMUST00000157441 104 ntBASIC0.77□□□□□ -2.29
H2afb1S4R1E0 Mir3079-201ENSMUST00000175428 90 ntBASIC0.77□□□□□ -2.29
H2afb1S4R1E0 Gm27326-201ENSMUST00000183504 95 ntBASIC0.77□□□□□ -2.29
H2afb1S4R1E0 Mir6369-201ENSMUST00000183772 106 ntBASIC0.77□□□□□ -2.29
H2afb1S4R1E0 Mir7665-201ENSMUST00000184907 63 ntBASIC0.77□□□□□ -2.29
H2afb1S4R1E0 Gm44807-201ENSMUST00000206115 154 ntBASIC0.77□□□□□ -2.29
H2afb1S4R1E0 Gm24030-201ENSMUST00000083931 164 ntBASIC0.77□□□□□ -2.29
H2afb1S4R1E0 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
H2afb1S4R1E0 Mir709-201ENSMUST00000102190 88 ntBASIC0.76□□□□□ -2.29
H2afb1S4R1E0 Gm23267-201ENSMUST00000178490 132 ntBASIC0.76□□□□□ -2.29
H2afb1S4R1E0 Gm27587-201ENSMUST00000185116 163 ntBASIC0.76□□□□□ -2.29
H2afb1S4R1E0 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.76□□□□□ -2.29
H2afb1S4R1E0 Gm24461-201ENSMUST00000082735 103 ntBASIC0.76□□□□□ -2.29
H2afb1S4R1E0 Gm26412-201ENSMUST00000157666 55 ntBASIC0.75□□□□□ -2.29
H2afb1S4R1E0 Gm24942-201ENSMUST00000158328 114 ntBASIC0.75□□□□□ -2.29
H2afb1S4R1E0 Gm23967-201ENSMUST00000175062 78 ntBASIC0.75□□□□□ -2.29
H2afb1S4R1E0 Ighv15-1-201ENSMUST00000194450 276 ntBASIC0.75□□□□□ -2.29
H2afb1S4R1E0 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
H2afb1S4R1E0 Gm22786-201ENSMUST00000104086 122 ntBASIC0.74□□□□□ -2.29
H2afb1S4R1E0 Gm14946-201ENSMUST00000119859 296 ntBASIC0.74□□□□□ -2.29
H2afb1S4R1E0 Gm26091-201ENSMUST00000122704 82 ntBASIC0.74□□□□□ -2.29
H2afb1S4R1E0 Gm15654-201ENSMUST00000152660 300 ntBASIC0.74□□□□□ -2.29
H2afb1S4R1E0 Gm24246-201ENSMUST00000157315 132 ntBASIC0.74□□□□□ -2.29
H2afb1S4R1E0 Gm16550-201ENSMUST00000162550 126 ntBASIC0.74□□□□□ -2.29
H2afb1S4R1E0 Gm20409-201ENSMUST00000173457 130 ntBASIC0.74□□□□□ -2.29
H2afb1S4R1E0 Mir7657-201ENSMUST00000196051 57 ntBASIC0.74□□□□□ -2.29
H2afb1S4R1E0 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC0.74□□□□□ -2.29
H2afb1S4R1E0 Gm25081-201ENSMUST00000082534 108 ntBASIC0.74□□□□□ -2.29
H2afb1S4R1E0 Gm25797-201ENSMUST00000082640 107 ntBASIC0.74□□□□□ -2.29
H2afb1S4R1E0 Mir27b-201ENSMUST00000083541 73 ntBASIC0.74□□□□□ -2.29
H2afb1S4R1E0 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.74□□□□□ -2.29
H2afb1S4R1E0 Gm26358-201ENSMUST00000158215 97 ntBASIC0.73□□□□□ -2.29
H2afb1S4R1E0 Gm24154-201ENSMUST00000175261 130 ntBASIC0.73□□□□□ -2.29
H2afb1S4R1E0 Mir6390-201ENSMUST00000184405 129 ntBASIC0.73□□□□□ -2.29
H2afb1S4R1E0 Mir30f-201ENSMUST00000196073 92 ntBASIC0.73□□□□□ -2.29
H2afb1S4R1E0 AC164561.1-201ENSMUST00000220414 115 ntBASIC0.73□□□□□ -2.29
H2afb1S4R1E0 Gm25610-201ENSMUST00000104016 129 ntBASIC0.72□□□□□ -2.29
H2afb1S4R1E0 Gm14039-201ENSMUST00000118705 101 ntBASIC0.72□□□□□ -2.29
H2afb1S4R1E0 Gm25544-201ENSMUST00000122676 120 ntBASIC0.72□□□□□ -2.29
H2afb1S4R1E0 Gm23329-201ENSMUST00000157415 108 ntBASIC0.72□□□□□ -2.29
H2afb1S4R1E0 Gm22336-201ENSMUST00000157719 107 ntBASIC0.72□□□□□ -2.29
H2afb1S4R1E0 Gm17528-201ENSMUST00000171026 239 ntBASIC0.72□□□□□ -2.29
H2afb1S4R1E0 Gm22887-201ENSMUST00000178586 107 ntBASIC0.72□□□□□ -2.29
H2afb1S4R1E0 Gm42533-201ENSMUST00000196247 157 ntBASIC0.72□□□□□ -2.29
H2afb1S4R1E0 Mir7118-201ENSMUST00000197760 61 ntBASIC0.72□□□□□ -2.29
H2afb1S4R1E0 Gm44320-201ENSMUST00000199276 86 ntBASIC0.72□□□□□ -2.29
H2afb1S4R1E0 Mir500-201ENSMUST00000093600 92 ntBASIC0.72□□□□□ -2.29
H2afb1S4R1E0 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.72□□□□□ -2.29
H2afb1S4R1E0 Mir1933-201ENSMUST00000158930 88 ntBASIC0.71□□□□□ -2.3
H2afb1S4R1E0 Mir15a-201ENSMUST00000175266 84 ntBASIC0.71□□□□□ -2.3
H2afb1S4R1E0 Gm44488-201ENSMUST00000199467 119 ntBASIC0.71□□□□□ -2.3
H2afb1S4R1E0 Gm24271-201ENSMUST00000102327 111 ntBASIC0.7□□□□□ -2.3
H2afb1S4R1E0 Gm25377-201ENSMUST00000104334 129 ntBASIC0.7□□□□□ -2.3
H2afb1S4R1E0 Gm22349-201ENSMUST00000157864 107 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 268.6 ms