Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.68□□□□□ -2.52
Scn8aQ9WTU3 Gm24091-201ENSMUST00000082550 83 ntBASIC-0.68□□□□□ -2.52
Scn8aQ9WTU3 Gm23711-201ENSMUST00000083856 83 ntBASIC-0.68□□□□□ -2.52
Scn8aQ9WTU3 Mir669k-201ENSMUST00000177742 127 ntBASIC-0.69□□□□□ -2.52
Scn8aQ9WTU3 Gm24488-201ENSMUST00000179934 127 ntBASIC-0.69□□□□□ -2.52
Scn8aQ9WTU3 Gm25673-201ENSMUST00000179957 127 ntBASIC-0.69□□□□□ -2.52
Scn8aQ9WTU3 Gm25701-201ENSMUST00000179988 127 ntBASIC-0.69□□□□□ -2.52
Scn8aQ9WTU3 Gm26431-201ENSMUST00000180199 127 ntBASIC-0.69□□□□□ -2.52
Scn8aQ9WTU3 Gm27755-201ENSMUST00000184623 132 ntBASIC-0.69□□□□□ -2.52
Scn8aQ9WTU3 Gm24150-201ENSMUST00000082759 104 ntBASIC-0.69□□□□□ -2.52
Scn8aQ9WTU3 Gm23412-201ENSMUST00000083017 107 ntBASIC-0.69□□□□□ -2.52
Scn8aQ9WTU3 Scarna9-201ENSMUST00000104318 70 ntBASIC-0.7□□□□□ -2.52
Scn8aQ9WTU3 Gm25600-201ENSMUST00000158357 106 ntBASIC-0.7□□□□□ -2.52
Scn8aQ9WTU3 Gm27639-201ENSMUST00000184937 85 ntBASIC-0.7□□□□□ -2.52
Scn8aQ9WTU3 Gm28648-201ENSMUST00000190092 343 ntBASIC-0.7□□□□□ -2.52
Scn8aQ9WTU3 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC-0.7□□□□□ -2.52
Scn8aQ9WTU3 Gm22085-201ENSMUST00000158344 110 ntBASIC-0.7□□□□□ -2.52
Scn8aQ9WTU3 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.7□□□□□ -2.52
Scn8aQ9WTU3 Gm25464-201ENSMUST00000175481 107 ntBASIC-0.7□□□□□ -2.52
Scn8aQ9WTU3 Gm23770-201ENSMUST00000178009 108 ntBASIC-0.7□□□□□ -2.52
Scn8aQ9WTU3 Gm22832-201ENSMUST00000178022 108 ntBASIC-0.7□□□□□ -2.52
Scn8aQ9WTU3 Gm23863-201ENSMUST00000178265 108 ntBASIC-0.7□□□□□ -2.52
Scn8aQ9WTU3 Gm24828-201ENSMUST00000178507 108 ntBASIC-0.7□□□□□ -2.52
Scn8aQ9WTU3 Gm23052-201ENSMUST00000178633 108 ntBASIC-0.7□□□□□ -2.52
Scn8aQ9WTU3 Gm25729-201ENSMUST00000179050 108 ntBASIC-0.7□□□□□ -2.52
Scn8aQ9WTU3 Gm25359-201ENSMUST00000179315 108 ntBASIC-0.7□□□□□ -2.52
Scn8aQ9WTU3 Gm22624-201ENSMUST00000179913 108 ntBASIC-0.7□□□□□ -2.52
Scn8aQ9WTU3 Gm38109-201ENSMUST00000195386 181 ntBASIC-0.7□□□□□ -2.52
Scn8aQ9WTU3 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC-0.7□□□□□ -2.52
Scn8aQ9WTU3 Gm29818-201ENSMUST00000218070 165 ntBASIC-0.7□□□□□ -2.52
Scn8aQ9WTU3 Gm26202-201ENSMUST00000082910 65 ntBASIC-0.7□□□□□ -2.52
Scn8aQ9WTU3 Gm24453-201ENSMUST00000083346 76 ntBASIC-0.7□□□□□ -2.52
Scn8aQ9WTU3 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.71□□□□□ -2.52
Scn8aQ9WTU3 Gm25328-201ENSMUST00000175013 107 ntBASIC-0.71□□□□□ -2.52
Scn8aQ9WTU3 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-0.71□□□□□ -2.52
Scn8aQ9WTU3 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-0.71□□□□□ -2.52
Scn8aQ9WTU3 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.72□□□□□ -2.52
Scn8aQ9WTU3 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.72□□□□□ -2.52
Scn8aQ9WTU3 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.72□□□□□ -2.52
Scn8aQ9WTU3 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.72□□□□□ -2.52
Scn8aQ9WTU3 AC159896.1-201ENSMUST00000215264 215 ntBASIC-0.72□□□□□ -2.52
Scn8aQ9WTU3 Gm25875-201ENSMUST00000104323 107 ntBASIC-0.72□□□□□ -2.53
Scn8aQ9WTU3 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.72□□□□□ -2.53
Scn8aQ9WTU3 Gm11834-201ENSMUST00000122257 585 ntBASIC-0.72□□□□□ -2.53
Scn8aQ9WTU3 Gm24504-201ENSMUST00000157679 100 ntBASIC-0.72□□□□□ -2.53
Scn8aQ9WTU3 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.72□□□□□ -2.53
Scn8aQ9WTU3 Gm24030-201ENSMUST00000083931 164 ntBASIC-0.72□□□□□ -2.53
Scn8aQ9WTU3 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-0.73□□□□□ -2.53
Scn8aQ9WTU3 Gm22118-201ENSMUST00000175593 171 ntBASIC-0.73□□□□□ -2.53
Scn8aQ9WTU3 Rny3-201ENSMUST00000083011 102 ntBASIC-0.73□□□□□ -2.53
Scn8aQ9WTU3 Gm27997-201ENSMUST00000184942 69 ntBASIC-0.74□□□□□ -2.53
Scn8aQ9WTU3 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.74□□□□□ -2.53
Scn8aQ9WTU3 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.74□□□□□ -2.53
Scn8aQ9WTU3 Gm25929-201ENSMUST00000082784 107 ntBASIC-0.74□□□□□ -2.53
Scn8aQ9WTU3 Gm24250-201ENSMUST00000157320 135 ntBASIC-0.74□□□□□ -2.53
Scn8aQ9WTU3 Snord42a-201ENSMUST00000082606 65 ntBASIC-0.74□□□□□ -2.53
Scn8aQ9WTU3 Gm25937-201ENSMUST00000083912 107 ntBASIC-0.74□□□□□ -2.53
Scn8aQ9WTU3 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-0.75□□□□□ -2.53
Scn8aQ9WTU3 Gm25610-201ENSMUST00000104016 129 ntBASIC-0.75□□□□□ -2.53
Scn8aQ9WTU3 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC-0.75□□□□□ -2.53
Scn8aQ9WTU3 Gm25588-201ENSMUST00000082501 140 ntBASIC-0.75□□□□□ -2.53
Scn8aQ9WTU3 Gm12770-201ENSMUST00000121734 462 ntBASIC-0.76□□□□□ -2.53
Scn8aQ9WTU3 Gm13345-201ENSMUST00000121928 228 ntBASIC-0.76□□□□□ -2.53
Scn8aQ9WTU3 Gm23262-201ENSMUST00000158323 168 ntBASIC-0.76□□□□□ -2.53
Scn8aQ9WTU3 Gm44468-201ENSMUST00000199516 105 ntBASIC-0.76□□□□□ -2.53
Scn8aQ9WTU3 Gm25431-201ENSMUST00000101978 107 ntBASIC-0.76□□□□□ -2.53
Scn8aQ9WTU3 Gm25160-201ENSMUST00000158914 102 ntBASIC-0.76□□□□□ -2.53
Scn8aQ9WTU3 CT025526.1-201ENSMUST00000217327 267 ntBASIC-0.76□□□□□ -2.53
Scn8aQ9WTU3 Gm7240-201ENSMUST00000220769 664 ntBASIC-0.76□□□□□ -2.53
Scn8aQ9WTU3 Gm25142-201ENSMUST00000082698 107 ntBASIC-0.76□□□□□ -2.53
Scn8aQ9WTU3 Gm22365-201ENSMUST00000093750 117 ntBASIC-0.76□□□□□ -2.53
Scn8aQ9WTU3 Snord100-201ENSMUST00000116836 74 ntBASIC-0.77□□□□□ -2.53
Scn8aQ9WTU3 Gm23779-201ENSMUST00000157938 64 ntBASIC-0.77□□□□□ -2.53
Scn8aQ9WTU3 Mir145b-201ENSMUST00000184434 75 ntBASIC-0.77□□□□□ -2.53
Scn8aQ9WTU3 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-0.77□□□□□ -2.53
Scn8aQ9WTU3 Gm26056-201ENSMUST00000083043 104 ntBASIC-0.77□□□□□ -2.53
Scn8aQ9WTU3 Gm25756-201ENSMUST00000103990 136 ntBASIC-0.77□□□□□ -2.53
Scn8aQ9WTU3 Mir1191-201ENSMUST00000116883 120 ntBASIC-0.77□□□□□ -2.53
Scn8aQ9WTU3 Gm14906-201ENSMUST00000119265 390 ntBASIC-0.77□□□□□ -2.53
Scn8aQ9WTU3 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.77□□□□□ -2.53
Scn8aQ9WTU3 Gm18665-201ENSMUST00000189783 270 ntBASIC-0.78□□□□□ -2.53
Scn8aQ9WTU3 Gm22433-201ENSMUST00000158550 142 ntBASIC-0.79□□□□□ -2.54
Scn8aQ9WTU3 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC-0.79□□□□□ -2.54
Scn8aQ9WTU3 Gm23845-201ENSMUST00000083834 152 ntBASIC-0.79□□□□□ -2.54
Scn8aQ9WTU3 Gm24047-201ENSMUST00000102405 104 ntBASIC-0.79□□□□□ -2.54
Scn8aQ9WTU3 Gm22557-201ENSMUST00000157804 102 ntBASIC-0.79□□□□□ -2.54
Scn8aQ9WTU3 Gm24810-201ENSMUST00000175317 70 ntBASIC-0.79□□□□□ -2.54
Scn8aQ9WTU3 Mir7043-201ENSMUST00000184219 70 ntBASIC-0.79□□□□□ -2.54
Scn8aQ9WTU3 Gm44419-201ENSMUST00000203338 229 ntBASIC-0.79□□□□□ -2.54
Scn8aQ9WTU3 Gm25634-201ENSMUST00000082667 105 ntBASIC-0.79□□□□□ -2.54
Scn8aQ9WTU3 Gm22051-201ENSMUST00000117002 127 ntBASIC-0.8□□□□□ -2.54
Scn8aQ9WTU3 Gm26393-201ENSMUST00000157625 129 ntBASIC-0.8□□□□□ -2.54
Scn8aQ9WTU3 Gm25974-201ENSMUST00000158701 94 ntBASIC-0.8□□□□□ -2.54
Scn8aQ9WTU3 Gm23793-201ENSMUST00000179396 117 ntBASIC-0.8□□□□□ -2.54
Scn8aQ9WTU3 Gm27539-201ENSMUST00000184971 224 ntBASIC-0.8□□□□□ -2.54
Scn8aQ9WTU3 Ighv15-1-201ENSMUST00000194450 276 ntBASIC-0.8□□□□□ -2.54
Scn8aQ9WTU3 AC125190.3-201ENSMUST00000223224 121 ntBASIC-0.8□□□□□ -2.54
Scn8aQ9WTU3 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.8□□□□□ -2.54
Scn8aQ9WTU3 Gm26007-201ENSMUST00000158798 120 ntBASIC-0.81□□□□□ -2.54
Scn8aQ9WTU3 Gm9227-201ENSMUST00000194733 566 ntBASIC-0.81□□□□□ -2.54
Retrieved 100 of 76,532 protein–RNA pairs in 161.7 ms