Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm26342-201ENSMUST00000104557 129 ntBASIC2.56□□□□□ -2
Nubp1Q9R060 Gm25061-201ENSMUST00000104665 107 ntBASIC2.56□□□□□ -2
Nubp1Q9R060 Gm26473-201ENSMUST00000116763 127 ntBASIC2.56□□□□□ -2
Nubp1Q9R060 Gm23468-201ENSMUST00000157125 108 ntBASIC2.56□□□□□ -2
Nubp1Q9R060 Gm22140-201ENSMUST00000158745 120 ntBASIC2.56□□□□□ -2
Nubp1Q9R060 Gm24223-201ENSMUST00000158827 90 ntBASIC2.56□□□□□ -2
Nubp1Q9R060 Gm26290-201ENSMUST00000158891 145 ntBASIC2.55□□□□□ -2
Nubp1Q9R060 Gm22914-201ENSMUST00000175195 77 ntBASIC2.55□□□□□ -2
Nubp1Q9R060 Mir3075-201ENSMUST00000175340 85 ntBASIC2.55□□□□□ -2
Nubp1Q9R060 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC2.54□□□□□ -2
Nubp1Q9R060 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Nubp1Q9R060 Gm14039-201ENSMUST00000118705 101 ntBASIC2.54□□□□□ -2
Nubp1Q9R060 Gm25945-201ENSMUST00000122484 135 ntBASIC2.54□□□□□ -2
Nubp1Q9R060 Gm24401-201ENSMUST00000157868 91 ntBASIC2.54□□□□□ -2
Nubp1Q9R060 Gm21885-201ENSMUST00000178891 327 ntBASIC2.54□□□□□ -2
Nubp1Q9R060 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.54□□□□□ -2
Nubp1Q9R060 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.54□□□□□ -2
Nubp1Q9R060 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.54□□□□□ -2
Nubp1Q9R060 Gm23011-201ENSMUST00000104148 132 ntBASIC2.53□□□□□ -2
Nubp1Q9R060 Gm23128-201ENSMUST00000104257 132 ntBASIC2.53□□□□□ -2
Nubp1Q9R060 Gm16171-201ENSMUST00000118004 324 ntBASIC2.53□□□□□ -2
Nubp1Q9R060 Gm24922-201ENSMUST00000158511 102 ntBASIC2.53□□□□□ -2
Nubp1Q9R060 Gm22416-201ENSMUST00000158590 88 ntBASIC2.53□□□□□ -2
Nubp1Q9R060 Gm25119-201ENSMUST00000158815 88 ntBASIC2.53□□□□□ -2
Nubp1Q9R060 Gm7258-201ENSMUST00000179317 300 ntBASIC2.53□□□□□ -2
Nubp1Q9R060 Gm23128-202ENSMUST00000196578 133 ntBASIC2.53□□□□□ -2
Nubp1Q9R060 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
Nubp1Q9R060 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Nubp1Q9R060 Scarna9-201ENSMUST00000104318 70 ntBASIC2.52□□□□□ -2.01
Nubp1Q9R060 Gm22067-201ENSMUST00000122790 107 ntBASIC2.52□□□□□ -2.01
Nubp1Q9R060 Gm25280-201ENSMUST00000157269 101 ntBASIC2.52□□□□□ -2.01
Nubp1Q9R060 Gm24900-201ENSMUST00000158128 134 ntBASIC2.52□□□□□ -2.01
Nubp1Q9R060 Gm22403-201ENSMUST00000174919 84 ntBASIC2.52□□□□□ -2.01
Nubp1Q9R060 Snora26-201ENSMUST00000175614 121 ntBASIC2.52□□□□□ -2.01
Nubp1Q9R060 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.52□□□□□ -2.01
Nubp1Q9R060 Mir410-201ENSMUST00000083563 81 ntBASIC2.52□□□□□ -2.01
Nubp1Q9R060 Gm24698-201ENSMUST00000083883 130 ntBASIC2.52□□□□□ -2.01
Nubp1Q9R060 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Nubp1Q9R060 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.52□□□□□ -2.01
Nubp1Q9R060 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Nubp1Q9R060 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Nubp1Q9R060 Gm22227-201ENSMUST00000157356 259 ntBASIC2.51□□□□□ -2.01
Nubp1Q9R060 Mir3061-201ENSMUST00000175129 91 ntBASIC2.51□□□□□ -2.01
Nubp1Q9R060 Mir3076-201ENSMUST00000175415 60 ntBASIC2.51□□□□□ -2.01
Nubp1Q9R060 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.51□□□□□ -2.01
Nubp1Q9R060 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Nubp1Q9R060 Gm25644-201ENSMUST00000083209 107 ntBASIC2.51□□□□□ -2.01
Nubp1Q9R060 Mir127-201ENSMUST00000093568 70 ntBASIC2.51□□□□□ -2.01
Nubp1Q9R060 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Nubp1Q9R060 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Nubp1Q9R060 Gm25992-201ENSMUST00000102437 109 ntBASIC2.5□□□□□ -2.01
Nubp1Q9R060 Gm43626-201ENSMUST00000198575 162 ntBASIC2.5□□□□□ -2.01
Nubp1Q9R060 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Nubp1Q9R060 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
Nubp1Q9R060 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
Nubp1Q9R060 Gm24122-201ENSMUST00000104107 132 ntBASIC2.49□□□□□ -2.01
Nubp1Q9R060 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Nubp1Q9R060 Mir1191-201ENSMUST00000116883 120 ntBASIC2.49□□□□□ -2.01
Nubp1Q9R060 Gm24907-201ENSMUST00000116932 128 ntBASIC2.49□□□□□ -2.01
Nubp1Q9R060 Gm26358-201ENSMUST00000158215 97 ntBASIC2.49□□□□□ -2.01
Nubp1Q9R060 Gm24879-201ENSMUST00000158386 143 ntBASIC2.49□□□□□ -2.01
Nubp1Q9R060 Gm25014-201ENSMUST00000158401 103 ntBASIC2.49□□□□□ -2.01
Nubp1Q9R060 Gm25368-201ENSMUST00000158847 131 ntBASIC2.49□□□□□ -2.01
Nubp1Q9R060 Gm25730-201ENSMUST00000178753 165 ntBASIC2.49□□□□□ -2.01
Nubp1Q9R060 Gm25528-201ENSMUST00000180264 132 ntBASIC2.49□□□□□ -2.01
Nubp1Q9R060 Gm27415-201ENSMUST00000183720 95 ntBASIC2.49□□□□□ -2.01
Nubp1Q9R060 Gm28767-201ENSMUST00000188601 114 ntBASIC2.49□□□□□ -2.01
Nubp1Q9R060 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.48□□□□□ -2.01
Nubp1Q9R060 Gm14923-201ENSMUST00000118270 155 ntBASIC2.48□□□□□ -2.01
Nubp1Q9R060 Gm22554-201ENSMUST00000157798 147 ntBASIC2.48□□□□□ -2.01
Nubp1Q9R060 Gm22961-201ENSMUST00000157964 106 ntBASIC2.48□□□□□ -2.01
Nubp1Q9R060 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC2.48□□□□□ -2.01
Nubp1Q9R060 Gm25696-201ENSMUST00000082900 105 ntBASIC2.48□□□□□ -2.01
Nubp1Q9R060 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
Nubp1Q9R060 Gm22205-201ENSMUST00000122655 71 ntBASIC2.47□□□□□ -2.01
Nubp1Q9R060 Gm22651-201ENSMUST00000157872 94 ntBASIC2.47□□□□□ -2.01
Nubp1Q9R060 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Nubp1Q9R060 Gm20718-201ENSMUST00000176058 259 ntBASIC2.47□□□□□ -2.01
Nubp1Q9R060 Mir7242-201ENSMUST00000183710 79 ntBASIC2.47□□□□□ -2.01
Nubp1Q9R060 Gm27975-201ENSMUST00000184400 101 ntBASIC2.47□□□□□ -2.01
Nubp1Q9R060 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.47□□□□□ -2.01
Nubp1Q9R060 Gm22622-201ENSMUST00000082870 129 ntBASIC2.47□□□□□ -2.01
Nubp1Q9R060 Mir532-201ENSMUST00000093630 96 ntBASIC2.47□□□□□ -2.01
Nubp1Q9R060 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.01
Nubp1Q9R060 Gm23900-201ENSMUST00000157569 108 ntBASIC2.46□□□□□ -2.02
Nubp1Q9R060 Gm24291-201ENSMUST00000157633 162 ntBASIC2.46□□□□□ -2.02
Nubp1Q9R060 Gm22802-201ENSMUST00000175621 89 ntBASIC2.46□□□□□ -2.02
Nubp1Q9R060 Mir5123-201ENSMUST00000177794 83 ntBASIC2.46□□□□□ -2.02
Nubp1Q9R060 Gm24674-201ENSMUST00000179194 104 ntBASIC2.46□□□□□ -2.02
Nubp1Q9R060 Gm27517-201ENSMUST00000184347 236 ntBASIC2.46□□□□□ -2.02
Nubp1Q9R060 Gm27419-201ENSMUST00000184576 109 ntBASIC2.46□□□□□ -2.02
Nubp1Q9R060 Gm25899-201ENSMUST00000082672 141 ntBASIC2.46□□□□□ -2.02
Nubp1Q9R060 Gm25629-201ENSMUST00000084001 107 ntBASIC2.46□□□□□ -2.02
Nubp1Q9R060 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Nubp1Q9R060 Mir682-201ENSMUST00000102281 96 ntBASIC2.45□□□□□ -2.02
Nubp1Q9R060 Gm24274-201ENSMUST00000116787 124 ntBASIC2.45□□□□□ -2.02
Nubp1Q9R060 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.45□□□□□ -2.02
Nubp1Q9R060 Gm26133-201ENSMUST00000157363 100 ntBASIC2.45□□□□□ -2.02
Nubp1Q9R060 Gm16561-201ENSMUST00000163001 192 ntBASIC2.45□□□□□ -2.02
Nubp1Q9R060 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 141.3 ms