Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm14671-201ENSMUST00000121790 262 ntBASIC0.7□□□□□ -2.3
Col4a4Q9QZR9 Gm23113-201ENSMUST00000158477 99 ntBASIC0.7□□□□□ -2.3
Col4a4Q9QZR9 Gm22425-201ENSMUST00000158532 138 ntBASIC0.7□□□□□ -2.3
Col4a4Q9QZR9 Gm23208-201ENSMUST00000158666 127 ntBASIC0.7□□□□□ -2.3
Col4a4Q9QZR9 Gm23339-201ENSMUST00000158962 139 ntBASIC0.7□□□□□ -2.3
Col4a4Q9QZR9 Mir6389-201ENSMUST00000183661 102 ntBASIC0.7□□□□□ -2.3
Col4a4Q9QZR9 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.7□□□□□ -2.3
Col4a4Q9QZR9 Gm44922-201ENSMUST00000206690 90 ntBASIC0.7□□□□□ -2.3
Col4a4Q9QZR9 AC168056.1-201ENSMUST00000225270 180 ntBASIC0.7□□□□□ -2.3
Col4a4Q9QZR9 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.7□□□□□ -2.3
Col4a4Q9QZR9 AC151902.2-201ENSMUST00000226419 301 ntBASIC0.7□□□□□ -2.3
Col4a4Q9QZR9 AC165138.1-201ENSMUST00000226984 270 ntBASIC0.7□□□□□ -2.3
Col4a4Q9QZR9 Gm25357-201ENSMUST00000082745 72 ntBASIC0.7□□□□□ -2.3
Col4a4Q9QZR9 Gm42718-201ENSMUST00000197319 2681 ntBASIC0.7□□□□□ -2.3
Col4a4Q9QZR9 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
Col4a4Q9QZR9 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.69□□□□□ -2.3
Col4a4Q9QZR9 Snord90-201ENSMUST00000104568 111 ntBASIC0.69□□□□□ -2.3
Col4a4Q9QZR9 Gm25980-201ENSMUST00000157176 218 ntBASIC0.69□□□□□ -2.3
Col4a4Q9QZR9 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.69□□□□□ -2.3
Col4a4Q9QZR9 Gm42719-201ENSMUST00000197393 355 ntBASIC0.69□□□□□ -2.3
Col4a4Q9QZR9 Gm44326-201ENSMUST00000198226 101 ntBASIC0.69□□□□□ -2.3
Col4a4Q9QZR9 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.69□□□□□ -2.3
Col4a4Q9QZR9 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.69□□□□□ -2.3
Col4a4Q9QZR9 Snord1a-201ENSMUST00000083160 74 ntBASIC0.69□□□□□ -2.3
Col4a4Q9QZR9 Snord61-201ENSMUST00000083176 71 ntBASIC0.69□□□□□ -2.3
Col4a4Q9QZR9 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.69□□□□□ -2.3
Col4a4Q9QZR9 Gm10351-201ENSMUST00000087694 125 ntBASIC0.69□□□□□ -2.3
Col4a4Q9QZR9 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.69□□□□□ -2.3
Col4a4Q9QZR9 Gm26293-201ENSMUST00000104170 84 ntBASIC0.69□□□□□ -2.3
Col4a4Q9QZR9 Gm14626-201ENSMUST00000117619 216 ntBASIC0.69□□□□□ -2.3
Col4a4Q9QZR9 Gm23656-201ENSMUST00000122626 112 ntBASIC0.69□□□□□ -2.3
Col4a4Q9QZR9 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.69□□□□□ -2.3
Col4a4Q9QZR9 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC0.69□□□□□ -2.3
Col4a4Q9QZR9 Gm22815-201ENSMUST00000157451 62 ntBASIC0.69□□□□□ -2.3
Col4a4Q9QZR9 Gm24808-201ENSMUST00000157993 118 ntBASIC0.69□□□□□ -2.3
Col4a4Q9QZR9 Gm25558-201ENSMUST00000158083 106 ntBASIC0.69□□□□□ -2.3
Col4a4Q9QZR9 Gm24634-201ENSMUST00000158672 107 ntBASIC0.69□□□□□ -2.3
Col4a4Q9QZR9 Mir7077-201ENSMUST00000183991 57 ntBASIC0.69□□□□□ -2.3
Col4a4Q9QZR9 Gm44325-201ENSMUST00000196757 77 ntBASIC0.69□□□□□ -2.3
Col4a4Q9QZR9 Gm43381-201ENSMUST00000198553 165 ntBASIC0.69□□□□□ -2.3
Col4a4Q9QZR9 Gm44338-201ENSMUST00000198614 110 ntBASIC0.69□□□□□ -2.3
Col4a4Q9QZR9 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.69□□□□□ -2.3
Col4a4Q9QZR9 Mir155-201ENSMUST00000083463 65 ntBASIC0.69□□□□□ -2.3
Col4a4Q9QZR9 Mir224-201ENSMUST00000083608 82 ntBASIC0.69□□□□□ -2.3
Col4a4Q9QZR9 Gm23531-201ENSMUST00000104567 68 ntBASIC0.68□□□□□ -2.3
Col4a4Q9QZR9 Gm22164-201ENSMUST00000158413 106 ntBASIC0.68□□□□□ -2.3
Col4a4Q9QZR9 Gm17020-201ENSMUST00000172274 274 ntBASIC0.68□□□□□ -2.3
Col4a4Q9QZR9 Gm25949-201ENSMUST00000175333 114 ntBASIC0.68□□□□□ -2.3
Col4a4Q9QZR9 Gm24167-201ENSMUST00000177733 124 ntBASIC0.68□□□□□ -2.3
Col4a4Q9QZR9 Gm24028-201ENSMUST00000178991 124 ntBASIC0.68□□□□□ -2.3
Col4a4Q9QZR9 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.68□□□□□ -2.3
Col4a4Q9QZR9 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.68□□□□□ -2.3
Col4a4Q9QZR9 Gm25697-201ENSMUST00000082902 98 ntBASIC0.68□□□□□ -2.3
Col4a4Q9QZR9 Gm22884-201ENSMUST00000083127 140 ntBASIC0.68□□□□□ -2.3
Col4a4Q9QZR9 Gm25683-201ENSMUST00000083940 131 ntBASIC0.68□□□□□ -2.3
Col4a4Q9QZR9 Gm24523-201ENSMUST00000083965 132 ntBASIC0.68□□□□□ -2.3
Col4a4Q9QZR9 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Col4a4Q9QZR9 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Col4a4Q9QZR9 Gm24232-201ENSMUST00000104314 132 ntBASIC0.67□□□□□ -2.3
Col4a4Q9QZR9 Mir880-201ENSMUST00000104809 78 ntBASIC0.67□□□□□ -2.3
Col4a4Q9QZR9 Gm23350-201ENSMUST00000158429 103 ntBASIC0.67□□□□□ -2.3
Col4a4Q9QZR9 Gm25750-201ENSMUST00000175483 112 ntBASIC0.67□□□□□ -2.3
Col4a4Q9QZR9 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC0.67□□□□□ -2.3
Col4a4Q9QZR9 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.67□□□□□ -2.3
Col4a4Q9QZR9 Gm26097-201ENSMUST00000179642 93 ntBASIC0.67□□□□□ -2.3
Col4a4Q9QZR9 Gm27974-201ENSMUST00000183415 105 ntBASIC0.67□□□□□ -2.3
Col4a4Q9QZR9 Gm44921-201ENSMUST00000205290 301 ntBASIC0.67□□□□□ -2.3
Col4a4Q9QZR9 Gm18213-201ENSMUST00000207850 178 ntBASIC0.67□□□□□ -2.3
Col4a4Q9QZR9 Gm8508-201ENSMUST00000061226 363 ntBASIC0.67□□□□□ -2.3
Col4a4Q9QZR9 Gm26207-201ENSMUST00000082909 104 ntBASIC0.67□□□□□ -2.3
Col4a4Q9QZR9 Mir92-2-201ENSMUST00000083679 91 ntBASIC0.67□□□□□ -2.3
Col4a4Q9QZR9 Snord35a-201ENSMUST00000083884 90 ntBASIC0.67□□□□□ -2.3
Col4a4Q9QZR9 Gm22139-201ENSMUST00000158747 105 ntBASIC0.66□□□□□ -2.3
Col4a4Q9QZR9 Gm17528-201ENSMUST00000171026 239 ntBASIC0.66□□□□□ -2.3
Col4a4Q9QZR9 Gm27851-201ENSMUST00000183529 63 ntBASIC0.66□□□□□ -2.3
Col4a4Q9QZR9 Gm45544-201ENSMUST00000211130 88 ntBASIC0.66□□□□□ -2.3
Col4a4Q9QZR9 Gm26224-201ENSMUST00000082506 80 ntBASIC0.66□□□□□ -2.3
Col4a4Q9QZR9 Gm24461-201ENSMUST00000082735 103 ntBASIC0.66□□□□□ -2.3
Col4a4Q9QZR9 Gm25915-201ENSMUST00000104265 126 ntBASIC0.65□□□□□ -2.3
Col4a4Q9QZR9 Gm25428-201ENSMUST00000157608 114 ntBASIC0.65□□□□□ -2.3
Col4a4Q9QZR9 Gm25882-201ENSMUST00000157784 85 ntBASIC0.65□□□□□ -2.3
Col4a4Q9QZR9 Gm26084-201ENSMUST00000157903 104 ntBASIC0.65□□□□□ -2.3
Col4a4Q9QZR9 Gm24221-201ENSMUST00000158833 313 ntBASIC0.65□□□□□ -2.3
Col4a4Q9QZR9 Gm22403-201ENSMUST00000174919 84 ntBASIC0.65□□□□□ -2.3
Col4a4Q9QZR9 Mir5104-201ENSMUST00000175319 94 ntBASIC0.65□□□□□ -2.3
Col4a4Q9QZR9 Gm22699-201ENSMUST00000175376 105 ntBASIC0.65□□□□□ -2.3
Col4a4Q9QZR9 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.65□□□□□ -2.3
Col4a4Q9QZR9 mt-Ta-201ENSMUST00000082398 69 ntBASIC0.65□□□□□ -2.3
Col4a4Q9QZR9 Snora20-201ENSMUST00000082703 128 ntBASIC0.65□□□□□ -2.3
Col4a4Q9QZR9 Gm11334-201ENSMUST00000121969 156 ntBASIC0.65□□□□□ -2.31
Col4a4Q9QZR9 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.65□□□□□ -2.31
Col4a4Q9QZR9 Gm26415-201ENSMUST00000157673 292 ntBASIC0.65□□□□□ -2.31
Col4a4Q9QZR9 Gm23277-201ENSMUST00000157914 136 ntBASIC0.65□□□□□ -2.31
Col4a4Q9QZR9 Gm24000-201ENSMUST00000158063 89 ntBASIC0.65□□□□□ -2.31
Col4a4Q9QZR9 Gm22332-201ENSMUST00000158072 126 ntBASIC0.65□□□□□ -2.31
Col4a4Q9QZR9 Gm25011-201ENSMUST00000158398 126 ntBASIC0.65□□□□□ -2.31
Col4a4Q9QZR9 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
Col4a4Q9QZR9 Gm18502-201ENSMUST00000218679 199 ntBASIC0.65□□□□□ -2.31
Col4a4Q9QZR9 Gm24762-201ENSMUST00000083689 104 ntBASIC0.65□□□□□ -2.31
Col4a4Q9QZR9 Mir490-201ENSMUST00000093567 84 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 172 ms