Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Gm24250-201ENSMUST00000157320 135 ntBASIC1.6□□□□□ -2.15
Shroom3Q9QXN0 Gm23770-201ENSMUST00000178009 108 ntBASIC1.6□□□□□ -2.15
Shroom3Q9QXN0 Gm22832-201ENSMUST00000178022 108 ntBASIC1.6□□□□□ -2.15
Shroom3Q9QXN0 Gm23863-201ENSMUST00000178265 108 ntBASIC1.6□□□□□ -2.15
Shroom3Q9QXN0 Gm24828-201ENSMUST00000178507 108 ntBASIC1.6□□□□□ -2.15
Shroom3Q9QXN0 Gm23052-201ENSMUST00000178633 108 ntBASIC1.6□□□□□ -2.15
Shroom3Q9QXN0 Gm25729-201ENSMUST00000179050 108 ntBASIC1.6□□□□□ -2.15
Shroom3Q9QXN0 Gm25359-201ENSMUST00000179315 108 ntBASIC1.6□□□□□ -2.15
Shroom3Q9QXN0 Gm26073-201ENSMUST00000179906 127 ntBASIC1.6□□□□□ -2.15
Shroom3Q9QXN0 Gm22624-201ENSMUST00000179913 108 ntBASIC1.6□□□□□ -2.15
Shroom3Q9QXN0 Mir7217-201ENSMUST00000200304 62 ntBASIC1.6□□□□□ -2.15
Shroom3Q9QXN0 Gm45544-201ENSMUST00000211130 88 ntBASIC1.6□□□□□ -2.15
Shroom3Q9QXN0 Mir490-201ENSMUST00000093567 84 ntBASIC1.6□□□□□ -2.15
Shroom3Q9QXN0 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Shroom3Q9QXN0 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.6□□□□□ -2.15
Shroom3Q9QXN0 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Shroom3Q9QXN0 Gm26154-201ENSMUST00000102339 96 ntBASIC1.59□□□□□ -2.15
Shroom3Q9QXN0 Gm22672-201ENSMUST00000104414 134 ntBASIC1.59□□□□□ -2.15
Shroom3Q9QXN0 Gm14674-201ENSMUST00000117816 342 ntBASIC1.59□□□□□ -2.15
Shroom3Q9QXN0 Gm14946-201ENSMUST00000119859 296 ntBASIC1.59□□□□□ -2.15
Shroom3Q9QXN0 Gm12309-201ENSMUST00000119889 182 ntBASIC1.59□□□□□ -2.15
Shroom3Q9QXN0 Gm26253-201ENSMUST00000122493 103 ntBASIC1.59□□□□□ -2.15
Shroom3Q9QXN0 Mir6351-201ENSMUST00000183826 99 ntBASIC1.59□□□□□ -2.15
Shroom3Q9QXN0 Mir7665-201ENSMUST00000184907 63 ntBASIC1.59□□□□□ -2.15
Shroom3Q9QXN0 Mir7021-201ENSMUST00000197026 63 ntBASIC1.59□□□□□ -2.15
Shroom3Q9QXN0 Gm22283-201ENSMUST00000082556 161 ntBASIC1.59□□□□□ -2.15
Shroom3Q9QXN0 Gm25170-201ENSMUST00000104191 129 ntBASIC1.59□□□□□ -2.16
Shroom3Q9QXN0 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.59□□□□□ -2.16
Shroom3Q9QXN0 Gm23390-201ENSMUST00000157393 106 ntBASIC1.59□□□□□ -2.16
Shroom3Q9QXN0 Gm23181-201ENSMUST00000158685 110 ntBASIC1.59□□□□□ -2.16
Shroom3Q9QXN0 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.59□□□□□ -2.16
Shroom3Q9QXN0 Gm26466-201ENSMUST00000179615 79 ntBASIC1.59□□□□□ -2.16
Shroom3Q9QXN0 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC1.59□□□□□ -2.16
Shroom3Q9QXN0 Gm25855-201ENSMUST00000082787 72 ntBASIC1.59□□□□□ -2.16
Shroom3Q9QXN0 Gm26123-201ENSMUST00000083363 135 ntBASIC1.59□□□□□ -2.16
Shroom3Q9QXN0 Gm25370-201ENSMUST00000158159 94 ntBASIC1.58□□□□□ -2.16
Shroom3Q9QXN0 Gm22515-201ENSMUST00000158273 305 ntBASIC1.58□□□□□ -2.16
Shroom3Q9QXN0 Gm23370-201ENSMUST00000199545 130 ntBASIC1.58□□□□□ -2.16
Shroom3Q9QXN0 n-R5s197-201ENSMUST00000083302 119 ntBASIC1.58□□□□□ -2.16
Shroom3Q9QXN0 Mir200b-201ENSMUST00000083615 70 ntBASIC1.58□□□□□ -2.16
Shroom3Q9QXN0 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Shroom3Q9QXN0 Gm22386-201ENSMUST00000158192 129 ntBASIC1.58□□□□□ -2.16
Shroom3Q9QXN0 Gm22770-201ENSMUST00000158368 67 ntBASIC1.58□□□□□ -2.16
Shroom3Q9QXN0 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Shroom3Q9QXN0 Gm25697-201ENSMUST00000082902 98 ntBASIC1.58□□□□□ -2.16
Shroom3Q9QXN0 Gm22679-201ENSMUST00000116975 100 ntBASIC1.57□□□□□ -2.16
Shroom3Q9QXN0 Gm23221-201ENSMUST00000158118 93 ntBASIC1.57□□□□□ -2.16
Shroom3Q9QXN0 Gm24668-201ENSMUST00000158935 104 ntBASIC1.57□□□□□ -2.16
Shroom3Q9QXN0 Gm20409-201ENSMUST00000173457 130 ntBASIC1.57□□□□□ -2.16
Shroom3Q9QXN0 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.57□□□□□ -2.16
Shroom3Q9QXN0 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Shroom3Q9QXN0 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC1.56□□□□□ -2.16
Shroom3Q9QXN0 Mir3094-201ENSMUST00000175121 64 ntBASIC1.56□□□□□ -2.16
Shroom3Q9QXN0 Gm24038-201ENSMUST00000082872 159 ntBASIC1.56□□□□□ -2.16
Shroom3Q9QXN0 Gm25199-201ENSMUST00000083095 104 ntBASIC1.56□□□□□ -2.16
Shroom3Q9QXN0 Gm22884-201ENSMUST00000083127 140 ntBASIC1.56□□□□□ -2.16
Shroom3Q9QXN0 Gm24412-201ENSMUST00000083426 109 ntBASIC1.56□□□□□ -2.16
Shroom3Q9QXN0 Mir448-201ENSMUST00000083516 112 ntBASIC1.56□□□□□ -2.16
Shroom3Q9QXN0 Gm11792-201ENSMUST00000120640 168 ntBASIC1.56□□□□□ -2.16
Shroom3Q9QXN0 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.56□□□□□ -2.16
Shroom3Q9QXN0 Gm24000-201ENSMUST00000158063 89 ntBASIC1.56□□□□□ -2.16
Shroom3Q9QXN0 Gm25241-201ENSMUST00000174909 84 ntBASIC1.56□□□□□ -2.16
Shroom3Q9QXN0 Gm26217-201ENSMUST00000175212 84 ntBASIC1.56□□□□□ -2.16
Shroom3Q9QXN0 Gm27894-201ENSMUST00000184177 92 ntBASIC1.56□□□□□ -2.16
Shroom3Q9QXN0 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Shroom3Q9QXN0 Gm25274-201ENSMUST00000104296 135 ntBASIC1.55□□□□□ -2.16
Shroom3Q9QXN0 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.55□□□□□ -2.16
Shroom3Q9QXN0 Gm25044-201ENSMUST00000158603 104 ntBASIC1.55□□□□□ -2.16
Shroom3Q9QXN0 Gm27878-201ENSMUST00000184000 106 ntBASIC1.55□□□□□ -2.16
Shroom3Q9QXN0 Gm27493-201ENSMUST00000184128 78 ntBASIC1.55□□□□□ -2.16
Shroom3Q9QXN0 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.55□□□□□ -2.16
Shroom3Q9QXN0 Gm43977-201ENSMUST00000203970 189 ntBASIC1.55□□□□□ -2.16
Shroom3Q9QXN0 Snora41-201ENSMUST00000082668 132 ntBASIC1.55□□□□□ -2.16
Shroom3Q9QXN0 Mir429-201ENSMUST00000083493 83 ntBASIC1.55□□□□□ -2.16
Shroom3Q9QXN0 Mir301-201ENSMUST00000083655 86 ntBASIC1.55□□□□□ -2.16
Shroom3Q9QXN0 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.54□□□□□ -2.16
Shroom3Q9QXN0 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Shroom3Q9QXN0 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.54□□□□□ -2.16
Shroom3Q9QXN0 Snord78-201ENSMUST00000104032 66 ntBASIC1.54□□□□□ -2.16
Shroom3Q9QXN0 Gm25289-201ENSMUST00000122799 119 ntBASIC1.54□□□□□ -2.16
Shroom3Q9QXN0 Gm25958-201ENSMUST00000175114 71 ntBASIC1.54□□□□□ -2.16
Shroom3Q9QXN0 Mir6928-201ENSMUST00000185166 70 ntBASIC1.54□□□□□ -2.16
Shroom3Q9QXN0 Gm43911-201ENSMUST00000203097 76 ntBASIC1.54□□□□□ -2.16
Shroom3Q9QXN0 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.54□□□□□ -2.16
Shroom3Q9QXN0 Gm25681-201ENSMUST00000083938 106 ntBASIC1.54□□□□□ -2.16
Shroom3Q9QXN0 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.53□□□□□ -2.16
Shroom3Q9QXN0 Gm23349-201ENSMUST00000158432 98 ntBASIC1.53□□□□□ -2.16
Shroom3Q9QXN0 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.53□□□□□ -2.16
Shroom3Q9QXN0 Gm22743-201ENSMUST00000083445 133 ntBASIC1.53□□□□□ -2.16
Shroom3Q9QXN0 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Shroom3Q9QXN0 Gm26104-201ENSMUST00000157250 108 ntBASIC1.52□□□□□ -2.17
Shroom3Q9QXN0 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.52□□□□□ -2.17
Shroom3Q9QXN0 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.52□□□□□ -2.17
Shroom3Q9QXN0 Snora20-201ENSMUST00000082703 128 ntBASIC1.52□□□□□ -2.17
Shroom3Q9QXN0 Gm25788-201ENSMUST00000082721 131 ntBASIC1.52□□□□□ -2.17
Shroom3Q9QXN0 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
Shroom3Q9QXN0 Gm26301-201ENSMUST00000104813 95 ntBASIC1.52□□□□□ -2.17
Shroom3Q9QXN0 Gm26181-201ENSMUST00000157687 106 ntBASIC1.52□□□□□ -2.17
Shroom3Q9QXN0 Gm24238-201ENSMUST00000157792 98 ntBASIC1.52□□□□□ -2.17
Shroom3Q9QXN0 Gm23384-201ENSMUST00000158593 103 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 238.7 ms