Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Gm8219-201ENSMUST00000218309 242 ntBASIC0.75□□□□□ -2.29
Cpsf3Q9QXK7 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.75□□□□□ -2.29
Cpsf3Q9QXK7 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.75□□□□□ -2.29
Cpsf3Q9QXK7 Mir488-201ENSMUST00000093595 109 ntBASIC0.75□□□□□ -2.29
Cpsf3Q9QXK7 Gm22786-201ENSMUST00000104086 122 ntBASIC0.74□□□□□ -2.29
Cpsf3Q9QXK7 Gm25110-201ENSMUST00000116684 121 ntBASIC0.74□□□□□ -2.29
Cpsf3Q9QXK7 Gm25775-201ENSMUST00000116716 121 ntBASIC0.74□□□□□ -2.29
Cpsf3Q9QXK7 Gm24795-201ENSMUST00000116737 121 ntBASIC0.74□□□□□ -2.29
Cpsf3Q9QXK7 Gm25171-201ENSMUST00000116926 121 ntBASIC0.74□□□□□ -2.29
Cpsf3Q9QXK7 Gm23838-201ENSMUST00000158067 162 ntBASIC0.74□□□□□ -2.29
Cpsf3Q9QXK7 Gm25901-201ENSMUST00000158494 130 ntBASIC0.74□□□□□ -2.29
Cpsf3Q9QXK7 Gm24547-201ENSMUST00000158649 149 ntBASIC0.74□□□□□ -2.29
Cpsf3Q9QXK7 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.74□□□□□ -2.29
Cpsf3Q9QXK7 Mir6928-201ENSMUST00000185166 70 ntBASIC0.74□□□□□ -2.29
Cpsf3Q9QXK7 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.74□□□□□ -2.29
Cpsf3Q9QXK7 Gm42795-201ENSMUST00000198847 76 ntBASIC0.74□□□□□ -2.29
Cpsf3Q9QXK7 Snord80-202ENSMUST00000199023 77 ntBASIC0.74□□□□□ -2.29
Cpsf3Q9QXK7 Mir411-201ENSMUST00000083543 82 ntBASIC0.74□□□□□ -2.29
Cpsf3Q9QXK7 Gm22079-201ENSMUST00000157592 106 ntBASIC0.73□□□□□ -2.29
Cpsf3Q9QXK7 Gm22565-201ENSMUST00000175540 69 ntBASIC0.73□□□□□ -2.29
Cpsf3Q9QXK7 Gm37746-201ENSMUST00000193249 198 ntBASIC0.73□□□□□ -2.29
Cpsf3Q9QXK7 Gm42506-201ENSMUST00000202009 150 ntBASIC0.73□□□□□ -2.29
Cpsf3Q9QXK7 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.73□□□□□ -2.29
Cpsf3Q9QXK7 Mir101a-201ENSMUST00000083517 83 ntBASIC0.73□□□□□ -2.29
Cpsf3Q9QXK7 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.72□□□□□ -2.29
Cpsf3Q9QXK7 Gm23203-201ENSMUST00000104374 107 ntBASIC0.72□□□□□ -2.29
Cpsf3Q9QXK7 Gm24678-201ENSMUST00000158756 104 ntBASIC0.72□□□□□ -2.29
Cpsf3Q9QXK7 Mir21b-201ENSMUST00000184317 108 ntBASIC0.72□□□□□ -2.29
Cpsf3Q9QXK7 Gm42623-201ENSMUST00000197225 379 ntBASIC0.72□□□□□ -2.29
Cpsf3Q9QXK7 Gm44922-201ENSMUST00000206690 90 ntBASIC0.72□□□□□ -2.29
Cpsf3Q9QXK7 Mir10b-201ENSMUST00000083566 68 ntBASIC0.72□□□□□ -2.29
Cpsf3Q9QXK7 Gm27934-201ENSMUST00000158795 63 ntBASIC0.71□□□□□ -2.3
Cpsf3Q9QXK7 Gm28435-201ENSMUST00000185496 108 ntBASIC0.71□□□□□ -2.3
Cpsf3Q9QXK7 Gm44488-201ENSMUST00000199467 119 ntBASIC0.71□□□□□ -2.3
Cpsf3Q9QXK7 Gm44853-201ENSMUST00000209070 250 ntBASIC0.71□□□□□ -2.3
Cpsf3Q9QXK7 AC153646.2-201ENSMUST00000220516 109 ntBASIC0.71□□□□□ -2.3
Cpsf3Q9QXK7 Gm24457-201ENSMUST00000083196 105 ntBASIC0.71□□□□□ -2.3
Cpsf3Q9QXK7 Gm16265-201ENSMUST00000134558 108 ntBASIC0.7□□□□□ -2.3
Cpsf3Q9QXK7 Gm22815-201ENSMUST00000157451 62 ntBASIC0.7□□□□□ -2.3
Cpsf3Q9QXK7 Gm22989-201ENSMUST00000158313 86 ntBASIC0.7□□□□□ -2.3
Cpsf3Q9QXK7 Mir6364-201ENSMUST00000183396 86 ntBASIC0.7□□□□□ -2.3
Cpsf3Q9QXK7 Gm27668-201ENSMUST00000184188 120 ntBASIC0.7□□□□□ -2.3
Cpsf3Q9QXK7 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.7□□□□□ -2.3
Cpsf3Q9QXK7 Gm21940-201ENSMUST00000204940 2278 ntBASIC0.69□□□□□ -2.3
Cpsf3Q9QXK7 Mir466h-201ENSMUST00000104748 81 ntBASIC0.69□□□□□ -2.3
Cpsf3Q9QXK7 Gm22195-201ENSMUST00000116861 108 ntBASIC0.69□□□□□ -2.3
Cpsf3Q9QXK7 Gm24728-201ENSMUST00000158226 125 ntBASIC0.69□□□□□ -2.3
Cpsf3Q9QXK7 Gm26403-201ENSMUST00000158500 105 ntBASIC0.69□□□□□ -2.3
Cpsf3Q9QXK7 Gm27803-201ENSMUST00000183763 119 ntBASIC0.69□□□□□ -2.3
Cpsf3Q9QXK7 Mir6394-201ENSMUST00000184738 99 ntBASIC0.69□□□□□ -2.3
Cpsf3Q9QXK7 Gm37997-201ENSMUST00000193515 267 ntBASIC0.69□□□□□ -2.3
Cpsf3Q9QXK7 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
Cpsf3Q9QXK7 Snord33-201ENSMUST00000083694 84 ntBASIC0.69□□□□□ -2.3
Cpsf3Q9QXK7 Mir1298-201ENSMUST00000116681 98 ntBASIC0.68□□□□□ -2.3
Cpsf3Q9QXK7 Gm24747-201ENSMUST00000157835 87 ntBASIC0.68□□□□□ -2.3
Cpsf3Q9QXK7 Gm23209-201ENSMUST00000158667 110 ntBASIC0.68□□□□□ -2.3
Cpsf3Q9QXK7 Gm24323-201ENSMUST00000175342 77 ntBASIC0.68□□□□□ -2.3
Cpsf3Q9QXK7 Gm25138-201ENSMUST00000083248 136 ntBASIC0.68□□□□□ -2.3
Cpsf3Q9QXK7 Mir448-201ENSMUST00000083516 112 ntBASIC0.68□□□□□ -2.3
Cpsf3Q9QXK7 Gm22003-201ENSMUST00000101885 107 ntBASIC0.67□□□□□ -2.3
Cpsf3Q9QXK7 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Cpsf3Q9QXK7 Snord69-201ENSMUST00000104024 80 ntBASIC0.67□□□□□ -2.3
Cpsf3Q9QXK7 Gm14039-201ENSMUST00000118705 101 ntBASIC0.67□□□□□ -2.3
Cpsf3Q9QXK7 Gm22796-201ENSMUST00000157234 106 ntBASIC0.67□□□□□ -2.3
Cpsf3Q9QXK7 Gm24476-201ENSMUST00000157437 131 ntBASIC0.67□□□□□ -2.3
Cpsf3Q9QXK7 Gm22348-201ENSMUST00000178674 79 ntBASIC0.67□□□□□ -2.3
Cpsf3Q9QXK7 Gm23410-201ENSMUST00000179967 107 ntBASIC0.67□□□□□ -2.3
Cpsf3Q9QXK7 Gm22756-201ENSMUST00000180118 107 ntBASIC0.67□□□□□ -2.3
Cpsf3Q9QXK7 Mir6369-201ENSMUST00000183772 106 ntBASIC0.67□□□□□ -2.3
Cpsf3Q9QXK7 Gm44458-201ENSMUST00000196594 143 ntBASIC0.67□□□□□ -2.3
Cpsf3Q9QXK7 Gm22505-201ENSMUST00000082956 108 ntBASIC0.67□□□□□ -2.3
Cpsf3Q9QXK7 Gm22363-201ENSMUST00000083100 108 ntBASIC0.67□□□□□ -2.3
Cpsf3Q9QXK7 Gm23814-201ENSMUST00000083230 102 ntBASIC0.67□□□□□ -2.3
Cpsf3Q9QXK7 Gm23095-201ENSMUST00000083446 107 ntBASIC0.67□□□□□ -2.3
Cpsf3Q9QXK7 Gm6272-201ENSMUST00000121256 171 ntBASIC0.66□□□□□ -2.3
Cpsf3Q9QXK7 Gm23853-201ENSMUST00000158375 104 ntBASIC0.66□□□□□ -2.3
Cpsf3Q9QXK7 Gm23859-201ENSMUST00000158383 64 ntBASIC0.66□□□□□ -2.3
Cpsf3Q9QXK7 Gm24500-201ENSMUST00000158447 124 ntBASIC0.66□□□□□ -2.3
Cpsf3Q9QXK7 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.66□□□□□ -2.3
Cpsf3Q9QXK7 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Cpsf3Q9QXK7 Gm36956-201ENSMUST00000193830 214 ntBASIC0.66□□□□□ -2.3
Cpsf3Q9QXK7 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC0.66□□□□□ -2.3
Cpsf3Q9QXK7 mt-Ta-201ENSMUST00000082398 69 ntBASIC0.66□□□□□ -2.3
Cpsf3Q9QXK7 Gm24920-201ENSMUST00000083018 85 ntBASIC0.66□□□□□ -2.3
Cpsf3Q9QXK7 Gm24030-201ENSMUST00000083931 164 ntBASIC0.66□□□□□ -2.3
Cpsf3Q9QXK7 Gm25378-201ENSMUST00000104333 129 ntBASIC0.65□□□□□ -2.31
Cpsf3Q9QXK7 Gm25316-201ENSMUST00000116826 118 ntBASIC0.65□□□□□ -2.31
Cpsf3Q9QXK7 Gm14502-201ENSMUST00000118154 113 ntBASIC0.65□□□□□ -2.31
Cpsf3Q9QXK7 Gm23864-201ENSMUST00000177607 107 ntBASIC0.65□□□□□ -2.31
Cpsf3Q9QXK7 Mir6390-201ENSMUST00000184405 129 ntBASIC0.65□□□□□ -2.31
Cpsf3Q9QXK7 Gm43381-201ENSMUST00000198553 165 ntBASIC0.65□□□□□ -2.31
Cpsf3Q9QXK7 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
Cpsf3Q9QXK7 Mir30a-201ENSMUST00000083471 71 ntBASIC0.65□□□□□ -2.31
Cpsf3Q9QXK7 Gm11248-201ENSMUST00000119568 201 ntBASIC0.64□□□□□ -2.31
Cpsf3Q9QXK7 Gm23008-201ENSMUST00000158946 80 ntBASIC0.64□□□□□ -2.31
Cpsf3Q9QXK7 Gm25444-201ENSMUST00000158999 113 ntBASIC0.64□□□□□ -2.31
Cpsf3Q9QXK7 Gm17020-201ENSMUST00000172274 274 ntBASIC0.64□□□□□ -2.31
Cpsf3Q9QXK7 Gm28767-201ENSMUST00000188601 114 ntBASIC0.64□□□□□ -2.31
Cpsf3Q9QXK7 Gm44211-201ENSMUST00000204867 145 ntBASIC0.64□□□□□ -2.31
Cpsf3Q9QXK7 Gm24527-201ENSMUST00000082920 107 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms