Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm24276-201ENSMUST00000102181 110 ntBASIC0.48□□□□□ -2.33
Scn4aQ9ER60 Gm22337-201ENSMUST00000157721 132 ntBASIC0.48□□□□□ -2.33
Scn4aQ9ER60 Gm22983-201ENSMUST00000158308 104 ntBASIC0.48□□□□□ -2.33
Scn4aQ9ER60 Gm25749-201ENSMUST00000175485 111 ntBASIC0.48□□□□□ -2.33
Scn4aQ9ER60 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.48□□□□□ -2.33
Scn4aQ9ER60 Gm15289-201ENSMUST00000117793 244 ntBASIC0.47□□□□□ -2.33
Scn4aQ9ER60 Gm25424-201ENSMUST00000157612 58 ntBASIC0.47□□□□□ -2.33
Scn4aQ9ER60 Gm26482-201ENSMUST00000158015 62 ntBASIC0.47□□□□□ -2.33
Scn4aQ9ER60 Mir7010-201ENSMUST00000183464 63 ntBASIC0.47□□□□□ -2.33
Scn4aQ9ER60 Mir6336-201ENSMUST00000183581 130 ntBASIC0.47□□□□□ -2.33
Scn4aQ9ER60 Mir384-201ENSMUST00000083565 88 ntBASIC0.47□□□□□ -2.33
Scn4aQ9ER60 Gm13345-201ENSMUST00000121928 228 ntBASIC0.46□□□□□ -2.34
Scn4aQ9ER60 Gm25771-201ENSMUST00000158565 144 ntBASIC0.46□□□□□ -2.34
Scn4aQ9ER60 Gm26116-201ENSMUST00000175600 77 ntBASIC0.46□□□□□ -2.34
Scn4aQ9ER60 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Scn4aQ9ER60 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.46□□□□□ -2.34
Scn4aQ9ER60 Gm24929-201ENSMUST00000083403 139 ntBASIC0.46□□□□□ -2.34
Scn4aQ9ER60 Snord33-201ENSMUST00000083694 84 ntBASIC0.46□□□□□ -2.34
Scn4aQ9ER60 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.46□□□□□ -2.34
Scn4aQ9ER60 Gm22999-201ENSMUST00000157082 88 ntBASIC0.45□□□□□ -2.34
Scn4aQ9ER60 Gm44409-201ENSMUST00000198810 166 ntBASIC0.45□□□□□ -2.34
Scn4aQ9ER60 Gm14001-201ENSMUST00000118847 247 ntBASIC0.45□□□□□ -2.34
Scn4aQ9ER60 Gm15654-201ENSMUST00000152660 300 ntBASIC0.45□□□□□ -2.34
Scn4aQ9ER60 Gm26152-201ENSMUST00000157427 101 ntBASIC0.45□□□□□ -2.34
Scn4aQ9ER60 Gm24549-201ENSMUST00000158647 139 ntBASIC0.45□□□□□ -2.34
Scn4aQ9ER60 Gm26160-201ENSMUST00000158965 63 ntBASIC0.45□□□□□ -2.34
Scn4aQ9ER60 Gm10172-201ENSMUST00000085929 558 ntBASIC0.45□□□□□ -2.34
Scn4aQ9ER60 Gm22522-201ENSMUST00000158271 151 ntBASIC0.44□□□□□ -2.34
Scn4aQ9ER60 Gm24761-201ENSMUST00000179589 127 ntBASIC0.44□□□□□ -2.34
Scn4aQ9ER60 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.44□□□□□ -2.34
Scn4aQ9ER60 Gm25720-201ENSMUST00000157503 105 ntBASIC0.43□□□□□ -2.34
Scn4aQ9ER60 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.43□□□□□ -2.34
Scn4aQ9ER60 Mir146-201ENSMUST00000083667 65 ntBASIC0.43□□□□□ -2.34
Scn4aQ9ER60 Gm24278-201ENSMUST00000104239 127 ntBASIC0.43□□□□□ -2.34
Scn4aQ9ER60 Gm23892-201ENSMUST00000158105 130 ntBASIC0.43□□□□□ -2.34
Scn4aQ9ER60 Snora15-201ENSMUST00000177461 131 ntBASIC0.43□□□□□ -2.34
Scn4aQ9ER60 Gm25802-201ENSMUST00000082639 77 ntBASIC0.43□□□□□ -2.34
Scn4aQ9ER60 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.42□□□□□ -2.34
Scn4aQ9ER60 Gm26360-201ENSMUST00000158872 103 ntBASIC0.42□□□□□ -2.34
Scn4aQ9ER60 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.42□□□□□ -2.34
Scn4aQ9ER60 Gm22759-201ENSMUST00000102276 96 ntBASIC0.41□□□□□ -2.34
Scn4aQ9ER60 Gm14946-201ENSMUST00000119859 296 ntBASIC0.41□□□□□ -2.34
Scn4aQ9ER60 Gm23002-201ENSMUST00000179221 107 ntBASIC0.41□□□□□ -2.34
Scn4aQ9ER60 Mir489-201ENSMUST00000093599 107 ntBASIC0.41□□□□□ -2.34
Scn4aQ9ER60 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
Scn4aQ9ER60 Gm6897-201ENSMUST00000117714 138 ntBASIC0.41□□□□□ -2.34
Scn4aQ9ER60 Gm14758-201ENSMUST00000119104 138 ntBASIC0.41□□□□□ -2.34
Scn4aQ9ER60 Gm24729-201ENSMUST00000158225 137 ntBASIC0.41□□□□□ -2.34
Scn4aQ9ER60 Gm25464-201ENSMUST00000175481 107 ntBASIC0.41□□□□□ -2.34
Scn4aQ9ER60 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
Scn4aQ9ER60 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
Scn4aQ9ER60 Gm14884-201ENSMUST00000120456 196 ntBASIC0.4□□□□□ -2.35
Scn4aQ9ER60 Gm22962-201ENSMUST00000157962 73 ntBASIC0.4□□□□□ -2.35
Scn4aQ9ER60 Gm23838-201ENSMUST00000158067 162 ntBASIC0.4□□□□□ -2.35
Scn4aQ9ER60 Gm22612-201ENSMUST00000158293 101 ntBASIC0.4□□□□□ -2.35
Scn4aQ9ER60 Gm22476-201ENSMUST00000158902 100 ntBASIC0.4□□□□□ -2.35
Scn4aQ9ER60 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.4□□□□□ -2.35
Scn4aQ9ER60 Gm26293-201ENSMUST00000104170 84 ntBASIC0.39□□□□□ -2.35
Scn4aQ9ER60 Gm3702-201ENSMUST00000211754 346 ntBASIC0.39□□□□□ -2.35
Scn4aQ9ER60 Gm19572-201ENSMUST00000214326 338 ntBASIC0.39□□□□□ -2.35
Scn4aQ9ER60 Gm25393-201ENSMUST00000157336 285 ntBASIC0.38□□□□□ -2.35
Scn4aQ9ER60 Gm44909-201ENSMUST00000208756 165 ntBASIC0.38□□□□□ -2.35
Scn4aQ9ER60 Gm25814-201ENSMUST00000082754 107 ntBASIC0.38□□□□□ -2.35
Scn4aQ9ER60 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
Scn4aQ9ER60 Mir709-201ENSMUST00000102190 88 ntBASIC0.38□□□□□ -2.35
Scn4aQ9ER60 Gm12815-201ENSMUST00000121737 135 ntBASIC0.38□□□□□ -2.35
Scn4aQ9ER60 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.38□□□□□ -2.35
Scn4aQ9ER60 Gm27993-201ENSMUST00000184362 85 ntBASIC0.38□□□□□ -2.35
Scn4aQ9ER60 Gm37330-201ENSMUST00000192606 153 ntBASIC0.38□□□□□ -2.35
Scn4aQ9ER60 Gm26026-201ENSMUST00000122726 123 ntBASIC0.37□□□□□ -2.35
Scn4aQ9ER60 Gm22466-201ENSMUST00000175278 69 ntBASIC0.37□□□□□ -2.35
Scn4aQ9ER60 Mir7657-201ENSMUST00000196051 57 ntBASIC0.37□□□□□ -2.35
Scn4aQ9ER60 Gm16186-201ENSMUST00000120132 216 ntBASIC0.36□□□□□ -2.35
Scn4aQ9ER60 Gm22145-201ENSMUST00000157396 148 ntBASIC0.36□□□□□ -2.35
Scn4aQ9ER60 Gm25494-201ENSMUST00000158143 100 ntBASIC0.36□□□□□ -2.35
Scn4aQ9ER60 Gm22433-201ENSMUST00000158550 142 ntBASIC0.36□□□□□ -2.35
Scn4aQ9ER60 Gm45471-201ENSMUST00000211270 281 ntBASIC0.36□□□□□ -2.35
Scn4aQ9ER60 AC122320.1-201ENSMUST00000227233 105 ntBASIC0.36□□□□□ -2.35
Scn4aQ9ER60 Gm25588-201ENSMUST00000082501 140 ntBASIC0.36□□□□□ -2.35
Scn4aQ9ER60 Gm26076-201ENSMUST00000104065 105 ntBASIC0.36□□□□□ -2.35
Scn4aQ9ER60 Gm14567-201ENSMUST00000117155 174 ntBASIC0.36□□□□□ -2.35
Scn4aQ9ER60 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
Scn4aQ9ER60 Gm44807-201ENSMUST00000206115 154 ntBASIC0.36□□□□□ -2.35
Scn4aQ9ER60 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.36□□□□□ -2.35
Scn4aQ9ER60 Gm26168-201ENSMUST00000083787 112 ntBASIC0.36□□□□□ -2.35
Scn4aQ9ER60 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.35□□□□□ -2.35
Scn4aQ9ER60 Gm24225-201ENSMUST00000158825 98 ntBASIC0.35□□□□□ -2.35
Scn4aQ9ER60 Mir100-201ENSMUST00000175270 80 ntBASIC0.35□□□□□ -2.35
Scn4aQ9ER60 Gm27289-201ENSMUST00000183341 82 ntBASIC0.35□□□□□ -2.35
Scn4aQ9ER60 Mir1a-2-201ENSMUST00000198520 72 ntBASIC0.35□□□□□ -2.35
Scn4aQ9ER60 Gm23301-201ENSMUST00000082713 65 ntBASIC0.35□□□□□ -2.35
Scn4aQ9ER60 Gm22753-201ENSMUST00000083657 107 ntBASIC0.35□□□□□ -2.35
Scn4aQ9ER60 Gm24256-201ENSMUST00000083696 84 ntBASIC0.35□□□□□ -2.35
Scn4aQ9ER60 Gm25596-201ENSMUST00000178368 107 ntBASIC0.34□□□□□ -2.35
Scn4aQ9ER60 Mir30f-201ENSMUST00000196073 92 ntBASIC0.34□□□□□ -2.35
Scn4aQ9ER60 AC153646.2-201ENSMUST00000220516 109 ntBASIC0.34□□□□□ -2.35
Scn4aQ9ER60 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.34□□□□□ -2.35
Scn4aQ9ER60 Gm25610-201ENSMUST00000104016 129 ntBASIC0.34□□□□□ -2.36
Scn4aQ9ER60 Snord82-201ENSMUST00000082889 70 ntBASIC0.34□□□□□ -2.36
Scn4aQ9ER60 n-R5s87-201ENSMUST00000122752 116 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 216.8 ms