Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm22973-201ENSMUST00000083298 191 ntBASIC0.86□□□□□ -2.27
Ddx28Q9CWT6 Mir33-201ENSMUST00000083531 69 ntBASIC0.86□□□□□ -2.27
Ddx28Q9CWT6 Gm22689-201ENSMUST00000102452 110 ntBASIC0.85□□□□□ -2.27
Ddx28Q9CWT6 Gm26301-201ENSMUST00000104813 95 ntBASIC0.85□□□□□ -2.27
Ddx28Q9CWT6 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.85□□□□□ -2.27
Ddx28Q9CWT6 Gm22079-201ENSMUST00000157592 106 ntBASIC0.85□□□□□ -2.27
Ddx28Q9CWT6 Mir466b-1-201ENSMUST00000177988 82 ntBASIC0.85□□□□□ -2.27
Ddx28Q9CWT6 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
Ddx28Q9CWT6 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
Ddx28Q9CWT6 Gm44308-201ENSMUST00000197080 99 ntBASIC0.85□□□□□ -2.27
Ddx28Q9CWT6 Gm44301-201ENSMUST00000200362 143 ntBASIC0.85□□□□□ -2.27
Ddx28Q9CWT6 mt-Ta-201ENSMUST00000082398 69 ntBASIC0.85□□□□□ -2.27
Ddx28Q9CWT6 Mir27b-201ENSMUST00000083541 73 ntBASIC0.85□□□□□ -2.27
Ddx28Q9CWT6 Snord35a-201ENSMUST00000083884 90 ntBASIC0.85□□□□□ -2.27
Ddx28Q9CWT6 Gm26274-201ENSMUST00000157103 321 ntBASIC0.84□□□□□ -2.27
Ddx28Q9CWT6 Gm22332-201ENSMUST00000158072 126 ntBASIC0.84□□□□□ -2.27
Ddx28Q9CWT6 Gm22801-201ENSMUST00000175624 84 ntBASIC0.84□□□□□ -2.27
Ddx28Q9CWT6 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.84□□□□□ -2.27
Ddx28Q9CWT6 Snord61-201ENSMUST00000083176 71 ntBASIC0.84□□□□□ -2.27
Ddx28Q9CWT6 Mir532-201ENSMUST00000093630 96 ntBASIC0.84□□□□□ -2.27
Ddx28Q9CWT6 Gm22606-201ENSMUST00000158290 103 ntBASIC0.83□□□□□ -2.28
Ddx28Q9CWT6 Gm25715-201ENSMUST00000158627 125 ntBASIC0.83□□□□□ -2.28
Ddx28Q9CWT6 Gm24547-201ENSMUST00000158649 149 ntBASIC0.83□□□□□ -2.28
Ddx28Q9CWT6 Mir1954-201ENSMUST00000175595 86 ntBASIC0.83□□□□□ -2.28
Ddx28Q9CWT6 Gm27656-201ENSMUST00000185055 80 ntBASIC0.83□□□□□ -2.28
Ddx28Q9CWT6 Gm14502-201ENSMUST00000118154 113 ntBASIC0.82□□□□□ -2.28
Ddx28Q9CWT6 Gm23838-201ENSMUST00000158067 162 ntBASIC0.82□□□□□ -2.28
Ddx28Q9CWT6 Gm23859-201ENSMUST00000158383 64 ntBASIC0.82□□□□□ -2.28
Ddx28Q9CWT6 Gm17020-201ENSMUST00000172274 274 ntBASIC0.82□□□□□ -2.28
Ddx28Q9CWT6 Mir15a-201ENSMUST00000175266 84 ntBASIC0.82□□□□□ -2.28
Ddx28Q9CWT6 Gm44338-201ENSMUST00000198614 110 ntBASIC0.82□□□□□ -2.28
Ddx28Q9CWT6 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
Ddx28Q9CWT6 Gm22544-201ENSMUST00000104349 127 ntBASIC0.81□□□□□ -2.28
Ddx28Q9CWT6 Gm24238-201ENSMUST00000157792 98 ntBASIC0.81□□□□□ -2.28
Ddx28Q9CWT6 Gm25599-201ENSMUST00000157816 103 ntBASIC0.81□□□□□ -2.28
Ddx28Q9CWT6 Gm23763-201ENSMUST00000158345 60 ntBASIC0.81□□□□□ -2.28
Ddx28Q9CWT6 Mir1966-201ENSMUST00000158807 108 ntBASIC0.81□□□□□ -2.28
Ddx28Q9CWT6 Gm23337-201ENSMUST00000158959 118 ntBASIC0.81□□□□□ -2.28
Ddx28Q9CWT6 Mir7663-201ENSMUST00000183950 61 ntBASIC0.81□□□□□ -2.28
Ddx28Q9CWT6 Gm42795-201ENSMUST00000198847 76 ntBASIC0.81□□□□□ -2.28
Ddx28Q9CWT6 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.81□□□□□ -2.28
Ddx28Q9CWT6 Snord32a-201ENSMUST00000083285 83 ntBASIC0.81□□□□□ -2.28
Ddx28Q9CWT6 Mir500-201ENSMUST00000093600 92 ntBASIC0.81□□□□□ -2.28
Ddx28Q9CWT6 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.8□□□□□ -2.28
Ddx28Q9CWT6 Gm23990-201ENSMUST00000117031 117 ntBASIC0.8□□□□□ -2.28
Ddx28Q9CWT6 Gm25980-201ENSMUST00000157176 218 ntBASIC0.8□□□□□ -2.28
Ddx28Q9CWT6 Mir1933-201ENSMUST00000158930 88 ntBASIC0.8□□□□□ -2.28
Ddx28Q9CWT6 Mir3079-201ENSMUST00000175428 90 ntBASIC0.8□□□□□ -2.28
Ddx28Q9CWT6 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
Ddx28Q9CWT6 Gm23893-201ENSMUST00000158106 134 ntBASIC0.79□□□□□ -2.28
Ddx28Q9CWT6 Gm24728-201ENSMUST00000158226 125 ntBASIC0.79□□□□□ -2.28
Ddx28Q9CWT6 Gm25716-201ENSMUST00000158628 104 ntBASIC0.79□□□□□ -2.28
Ddx28Q9CWT6 Gm25401-201ENSMUST00000082975 106 ntBASIC0.79□□□□□ -2.28
Ddx28Q9CWT6 Mir695-201ENSMUST00000102261 109 ntBASIC0.78□□□□□ -2.28
Ddx28Q9CWT6 Gm25506-201ENSMUST00000104339 70 ntBASIC0.78□□□□□ -2.28
Ddx28Q9CWT6 Snord71-201ENSMUST00000104361 85 ntBASIC0.78□□□□□ -2.28
Ddx28Q9CWT6 Gm14039-201ENSMUST00000118705 101 ntBASIC0.78□□□□□ -2.28
Ddx28Q9CWT6 Gm22796-201ENSMUST00000157234 106 ntBASIC0.78□□□□□ -2.28
Ddx28Q9CWT6 Gm20386-201ENSMUST00000174010 132 ntBASIC0.78□□□□□ -2.28
Ddx28Q9CWT6 Gm38113-201ENSMUST00000193704 201 ntBASIC0.78□□□□□ -2.28
Ddx28Q9CWT6 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.78□□□□□ -2.28
Ddx28Q9CWT6 Gm24379-201ENSMUST00000122695 86 ntBASIC0.77□□□□□ -2.29
Ddx28Q9CWT6 Gm24054-201ENSMUST00000158619 105 ntBASIC0.77□□□□□ -2.29
Ddx28Q9CWT6 Gm25976-201ENSMUST00000158695 130 ntBASIC0.77□□□□□ -2.29
Ddx28Q9CWT6 Gm23340-201ENSMUST00000158955 123 ntBASIC0.77□□□□□ -2.29
Ddx28Q9CWT6 Gm16550-201ENSMUST00000162550 126 ntBASIC0.77□□□□□ -2.29
Ddx28Q9CWT6 Gm20409-201ENSMUST00000173457 130 ntBASIC0.77□□□□□ -2.29
Ddx28Q9CWT6 Gm27587-201ENSMUST00000185116 163 ntBASIC0.77□□□□□ -2.29
Ddx28Q9CWT6 Gm18665-201ENSMUST00000189783 270 ntBASIC0.77□□□□□ -2.29
Ddx28Q9CWT6 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
Ddx28Q9CWT6 Gm44807-201ENSMUST00000206115 154 ntBASIC0.77□□□□□ -2.29
Ddx28Q9CWT6 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.77□□□□□ -2.29
Ddx28Q9CWT6 Gm24527-201ENSMUST00000082920 107 ntBASIC0.77□□□□□ -2.29
Ddx28Q9CWT6 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.77□□□□□ -2.29
Ddx28Q9CWT6 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.76□□□□□ -2.29
Ddx28Q9CWT6 Gm22673-201ENSMUST00000104415 131 ntBASIC0.76□□□□□ -2.29
Ddx28Q9CWT6 Snord72-201ENSMUST00000104549 81 ntBASIC0.76□□□□□ -2.29
Ddx28Q9CWT6 Gm22139-201ENSMUST00000158747 105 ntBASIC0.76□□□□□ -2.29
Ddx28Q9CWT6 Gm25610-201ENSMUST00000104016 129 ntBASIC0.75□□□□□ -2.29
Ddx28Q9CWT6 Gm23320-201ENSMUST00000104462 127 ntBASIC0.75□□□□□ -2.29
Ddx28Q9CWT6 Gm25110-201ENSMUST00000116684 121 ntBASIC0.75□□□□□ -2.29
Ddx28Q9CWT6 Gm25775-201ENSMUST00000116716 121 ntBASIC0.75□□□□□ -2.29
Ddx28Q9CWT6 Gm24795-201ENSMUST00000116737 121 ntBASIC0.75□□□□□ -2.29
Ddx28Q9CWT6 Gm25171-201ENSMUST00000116926 121 ntBASIC0.75□□□□□ -2.29
Ddx28Q9CWT6 Gm22699-201ENSMUST00000175376 105 ntBASIC0.75□□□□□ -2.29
Ddx28Q9CWT6 Gm27446-201ENSMUST00000183963 89 ntBASIC0.75□□□□□ -2.29
Ddx28Q9CWT6 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
Ddx28Q9CWT6 Mir448-201ENSMUST00000083516 112 ntBASIC0.75□□□□□ -2.29
Ddx28Q9CWT6 Mir101a-201ENSMUST00000083517 83 ntBASIC0.75□□□□□ -2.29
Ddx28Q9CWT6 Gm22003-201ENSMUST00000101885 107 ntBASIC0.74□□□□□ -2.29
Ddx28Q9CWT6 Gm26338-201ENSMUST00000102372 110 ntBASIC0.74□□□□□ -2.29
Ddx28Q9CWT6 Gm23766-201ENSMUST00000103894 80 ntBASIC0.74□□□□□ -2.29
Ddx28Q9CWT6 Gm22373-201ENSMUST00000104584 89 ntBASIC0.74□□□□□ -2.29
Ddx28Q9CWT6 Gm24476-201ENSMUST00000157437 131 ntBASIC0.74□□□□□ -2.29
Ddx28Q9CWT6 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.74□□□□□ -2.29
Ddx28Q9CWT6 Gm23410-201ENSMUST00000179967 107 ntBASIC0.74□□□□□ -2.29
Ddx28Q9CWT6 Gm22756-201ENSMUST00000180118 107 ntBASIC0.74□□□□□ -2.29
Ddx28Q9CWT6 Mir6369-201ENSMUST00000183772 106 ntBASIC0.74□□□□□ -2.29
Ddx28Q9CWT6 Gm27792-201ENSMUST00000184031 115 ntBASIC0.74□□□□□ -2.29
Ddx28Q9CWT6 Gm28767-201ENSMUST00000188601 114 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 132 ms