Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.6□□□□□ -2.31
Smc1aQ9CU62 Gm22738-201ENSMUST00000083440 147 ntBASIC0.6□□□□□ -2.31
Smc1aQ9CU62 Mir500-201ENSMUST00000093600 92 ntBASIC0.6□□□□□ -2.31
Smc1aQ9CU62 Gm24509-201ENSMUST00000157086 101 ntBASIC0.59□□□□□ -2.31
Smc1aQ9CU62 Gm25358-201ENSMUST00000157189 101 ntBASIC0.59□□□□□ -2.31
Smc1aQ9CU62 Gm22850-201ENSMUST00000157714 82 ntBASIC0.59□□□□□ -2.31
Smc1aQ9CU62 Mir1933-201ENSMUST00000158930 88 ntBASIC0.59□□□□□ -2.31
Smc1aQ9CU62 Gm25588-201ENSMUST00000082501 140 ntBASIC0.59□□□□□ -2.31
Smc1aQ9CU62 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
Smc1aQ9CU62 Gm26484-201ENSMUST00000158018 106 ntBASIC0.58□□□□□ -2.32
Smc1aQ9CU62 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.58□□□□□ -2.32
Smc1aQ9CU62 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.58□□□□□ -2.32
Smc1aQ9CU62 Gm24385-201ENSMUST00000122694 350 ntBASIC0.57□□□□□ -2.32
Smc1aQ9CU62 Gm22790-201ENSMUST00000157229 129 ntBASIC0.57□□□□□ -2.32
Smc1aQ9CU62 Gm23258-201ENSMUST00000158319 106 ntBASIC0.57□□□□□ -2.32
Smc1aQ9CU62 Gm25364-201ENSMUST00000158851 107 ntBASIC0.57□□□□□ -2.32
Smc1aQ9CU62 Gm22887-201ENSMUST00000178586 107 ntBASIC0.57□□□□□ -2.32
Smc1aQ9CU62 Gm25138-201ENSMUST00000083248 136 ntBASIC0.57□□□□□ -2.32
Smc1aQ9CU62 Gm25611-201ENSMUST00000104017 133 ntBASIC0.56□□□□□ -2.32
Smc1aQ9CU62 Gm23708-201ENSMUST00000104367 123 ntBASIC0.56□□□□□ -2.32
Smc1aQ9CU62 Gm24132-201ENSMUST00000104745 91 ntBASIC0.56□□□□□ -2.32
Smc1aQ9CU62 Gm24415-201ENSMUST00000180218 107 ntBASIC0.56□□□□□ -2.32
Smc1aQ9CU62 Gm27289-201ENSMUST00000183341 82 ntBASIC0.56□□□□□ -2.32
Smc1aQ9CU62 Gm44488-201ENSMUST00000199467 119 ntBASIC0.56□□□□□ -2.32
Smc1aQ9CU62 Mir532-201ENSMUST00000093630 96 ntBASIC0.56□□□□□ -2.32
Smc1aQ9CU62 Gm24250-201ENSMUST00000157320 135 ntBASIC0.55□□□□□ -2.32
Smc1aQ9CU62 Gm22815-201ENSMUST00000157451 62 ntBASIC0.55□□□□□ -2.32
Smc1aQ9CU62 Gm23838-201ENSMUST00000158067 162 ntBASIC0.55□□□□□ -2.32
Smc1aQ9CU62 Gm23853-201ENSMUST00000158375 104 ntBASIC0.55□□□□□ -2.32
Smc1aQ9CU62 Gm22946-201ENSMUST00000158558 82 ntBASIC0.55□□□□□ -2.32
Smc1aQ9CU62 Gm26360-201ENSMUST00000158872 103 ntBASIC0.55□□□□□ -2.32
Smc1aQ9CU62 Gm23770-201ENSMUST00000178009 108 ntBASIC0.55□□□□□ -2.32
Smc1aQ9CU62 Gm22832-201ENSMUST00000178022 108 ntBASIC0.55□□□□□ -2.32
Smc1aQ9CU62 Gm23863-201ENSMUST00000178265 108 ntBASIC0.55□□□□□ -2.32
Smc1aQ9CU62 Gm24828-201ENSMUST00000178507 108 ntBASIC0.55□□□□□ -2.32
Smc1aQ9CU62 Gm23052-201ENSMUST00000178633 108 ntBASIC0.55□□□□□ -2.32
Smc1aQ9CU62 Gm25729-201ENSMUST00000179050 108 ntBASIC0.55□□□□□ -2.32
Smc1aQ9CU62 Gm25359-201ENSMUST00000179315 108 ntBASIC0.55□□□□□ -2.32
Smc1aQ9CU62 Gm22624-201ENSMUST00000179913 108 ntBASIC0.55□□□□□ -2.32
Smc1aQ9CU62 Gm43432-201ENSMUST00000196352 121 ntBASIC0.55□□□□□ -2.32
Smc1aQ9CU62 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.55□□□□□ -2.32
Smc1aQ9CU62 Gm25769-201ENSMUST00000158569 127 ntBASIC0.54□□□□□ -2.32
Smc1aQ9CU62 Gm24547-201ENSMUST00000158649 149 ntBASIC0.54□□□□□ -2.32
Smc1aQ9CU62 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
Smc1aQ9CU62 Gm25482-201ENSMUST00000083225 107 ntBASIC0.54□□□□□ -2.32
Smc1aQ9CU62 Mir30a-201ENSMUST00000083471 71 ntBASIC0.54□□□□□ -2.32
Smc1aQ9CU62 Gm26420-201ENSMUST00000104273 103 ntBASIC0.53□□□□□ -2.32
Smc1aQ9CU62 Gm6272-201ENSMUST00000121256 171 ntBASIC0.53□□□□□ -2.32
Smc1aQ9CU62 Gm23901-201ENSMUST00000157570 107 ntBASIC0.53□□□□□ -2.32
Smc1aQ9CU62 Gm22557-201ENSMUST00000157804 102 ntBASIC0.53□□□□□ -2.32
Smc1aQ9CU62 Gm23416-201ENSMUST00000175520 95 ntBASIC0.53□□□□□ -2.32
Smc1aQ9CU62 Mir1a-2-201ENSMUST00000198520 72 ntBASIC0.53□□□□□ -2.32
Smc1aQ9CU62 Gm44211-201ENSMUST00000204867 145 ntBASIC0.53□□□□□ -2.32
Smc1aQ9CU62 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.53□□□□□ -2.32
Smc1aQ9CU62 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.53□□□□□ -2.32
Smc1aQ9CU62 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.53□□□□□ -2.32
Smc1aQ9CU62 Gm22576-201ENSMUST00000083733 104 ntBASIC0.53□□□□□ -2.32
Smc1aQ9CU62 Mir1898-201ENSMUST00000122643 83 ntBASIC0.52□□□□□ -2.33
Smc1aQ9CU62 Gm22612-201ENSMUST00000158293 101 ntBASIC0.52□□□□□ -2.33
Smc1aQ9CU62 Gm37116-201ENSMUST00000195161 147 ntBASIC0.52□□□□□ -2.33
Smc1aQ9CU62 Gm25375-201ENSMUST00000158157 135 ntBASIC0.51□□□□□ -2.33
Smc1aQ9CU62 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.51□□□□□ -2.33
Smc1aQ9CU62 Gm26092-201ENSMUST00000179798 97 ntBASIC0.51□□□□□ -2.33
Smc1aQ9CU62 Mir669a-1-201ENSMUST00000180238 97 ntBASIC0.51□□□□□ -2.33
Smc1aQ9CU62 Mir6390-201ENSMUST00000184405 129 ntBASIC0.51□□□□□ -2.33
Smc1aQ9CU62 Gm42795-201ENSMUST00000198847 76 ntBASIC0.51□□□□□ -2.33
Smc1aQ9CU62 Mir721-201ENSMUST00000200230 88 ntBASIC0.51□□□□□ -2.33
Smc1aQ9CU62 Gm43944-201ENSMUST00000205220 120 ntBASIC0.51□□□□□ -2.33
Smc1aQ9CU62 Gm8219-201ENSMUST00000218309 242 ntBASIC0.51□□□□□ -2.33
Smc1aQ9CU62 AC154390.1-201ENSMUST00000225629 277 ntBASIC0.51□□□□□ -2.33
Smc1aQ9CU62 mt-Td-201ENSMUST00000082404 70 ntBASIC0.51□□□□□ -2.33
Smc1aQ9CU62 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
Smc1aQ9CU62 Snord69-201ENSMUST00000104024 80 ntBASIC0.5□□□□□ -2.33
Smc1aQ9CU62 Gm23772-201ENSMUST00000104433 102 ntBASIC0.5□□□□□ -2.33
Smc1aQ9CU62 Mir1197-201ENSMUST00000117037 120 ntBASIC0.5□□□□□ -2.33
Smc1aQ9CU62 Gm24728-201ENSMUST00000158226 125 ntBASIC0.5□□□□□ -2.33
Smc1aQ9CU62 Gm24549-201ENSMUST00000158647 139 ntBASIC0.5□□□□□ -2.33
Smc1aQ9CU62 Gm22466-201ENSMUST00000175278 69 ntBASIC0.5□□□□□ -2.33
Smc1aQ9CU62 Gm24527-201ENSMUST00000082920 107 ntBASIC0.5□□□□□ -2.33
Smc1aQ9CU62 Mir302d-201ENSMUST00000083513 66 ntBASIC0.5□□□□□ -2.33
Smc1aQ9CU62 Gm22148-201ENSMUST00000104445 107 ntBASIC0.49□□□□□ -2.33
Smc1aQ9CU62 Gm25315-201ENSMUST00000116823 121 ntBASIC0.49□□□□□ -2.33
Smc1aQ9CU62 Gm24640-201ENSMUST00000116949 126 ntBASIC0.49□□□□□ -2.33
Smc1aQ9CU62 Gm22626-201ENSMUST00000116990 126 ntBASIC0.49□□□□□ -2.33
Smc1aQ9CU62 Gm14946-201ENSMUST00000119859 296 ntBASIC0.49□□□□□ -2.33
Smc1aQ9CU62 Gm25985-201ENSMUST00000122677 107 ntBASIC0.49□□□□□ -2.33
Smc1aQ9CU62 Gm23672-201ENSMUST00000157471 107 ntBASIC0.49□□□□□ -2.33
Smc1aQ9CU62 Gm22079-201ENSMUST00000157592 106 ntBASIC0.49□□□□□ -2.33
Smc1aQ9CU62 Gm22332-201ENSMUST00000158072 126 ntBASIC0.49□□□□□ -2.33
Smc1aQ9CU62 Gm22476-201ENSMUST00000158902 100 ntBASIC0.49□□□□□ -2.33
Smc1aQ9CU62 Gm26426-201ENSMUST00000177866 123 ntBASIC0.49□□□□□ -2.33
Smc1aQ9CU62 Gm24761-201ENSMUST00000179589 127 ntBASIC0.49□□□□□ -2.33
Smc1aQ9CU62 Gm24488-201ENSMUST00000179934 127 ntBASIC0.49□□□□□ -2.33
Smc1aQ9CU62 Gm25701-201ENSMUST00000179988 127 ntBASIC0.49□□□□□ -2.33
Smc1aQ9CU62 Gm26060-201ENSMUST00000180094 123 ntBASIC0.49□□□□□ -2.33
Smc1aQ9CU62 Gm26431-201ENSMUST00000180199 127 ntBASIC0.49□□□□□ -2.33
Smc1aQ9CU62 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
Smc1aQ9CU62 Mir411-201ENSMUST00000083543 82 ntBASIC0.49□□□□□ -2.33
Smc1aQ9CU62 Gm14837-201ENSMUST00000119688 206 ntBASIC0.48□□□□□ -2.33
Smc1aQ9CU62 Gm24500-201ENSMUST00000158447 124 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 208.4 ms