Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Gm25935-201ENSMUST00000178746 107 ntBASIC-0.12□□□□□ -2.43
Q9CR55 Gm25235-201ENSMUST00000179933 107 ntBASIC-0.12□□□□□ -2.43
Q9CR55 Mir6369-201ENSMUST00000183772 106 ntBASIC-0.12□□□□□ -2.43
Q9CR55 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.12□□□□□ -2.43
Q9CR55 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
Q9CR55 Gm14301-201ENSMUST00000120181 324 ntBASIC-0.13□□□□□ -2.43
Q9CR55 Gm22491-201ENSMUST00000157190 102 ntBASIC-0.13□□□□□ -2.43
Q9CR55 Gm25267-201ENSMUST00000158522 63 ntBASIC-0.13□□□□□ -2.43
Q9CR55 Gm26158-201ENSMUST00000158973 119 ntBASIC-0.13□□□□□ -2.43
Q9CR55 Gm22242-201ENSMUST00000175224 118 ntBASIC-0.13□□□□□ -2.43
Q9CR55 Gm42623-201ENSMUST00000197225 379 ntBASIC-0.13□□□□□ -2.43
Q9CR55 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.13□□□□□ -2.43
Q9CR55 Gm23406-201ENSMUST00000082537 122 ntBASIC-0.13□□□□□ -2.43
Q9CR55 Gm22080-201ENSMUST00000157591 106 ntBASIC-0.14□□□□□ -2.43
Q9CR55 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.14□□□□□ -2.43
Q9CR55 Ighv12-2-201ENSMUST00000191949 362 ntBASIC-0.14□□□□□ -2.43
Q9CR55 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.14□□□□□ -2.43
Q9CR55 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.14□□□□□ -2.43
Q9CR55 Gm26207-201ENSMUST00000082909 104 ntBASIC-0.14□□□□□ -2.43
Q9CR55 Mir363-201ENSMUST00000093598 75 ntBASIC-0.14□□□□□ -2.43
Q9CR55 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
Q9CR55 Gm26293-201ENSMUST00000104170 84 ntBASIC-0.15□□□□□ -2.43
Q9CR55 Gm25848-201ENSMUST00000116790 144 ntBASIC-0.15□□□□□ -2.43
Q9CR55 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.15□□□□□ -2.43
Q9CR55 Gm24006-201ENSMUST00000158462 132 ntBASIC-0.15□□□□□ -2.43
Q9CR55 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.15□□□□□ -2.43
Q9CR55 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC-0.15□□□□□ -2.43
Q9CR55 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.15□□□□□ -2.43
Q9CR55 Mir327-201ENSMUST00000199328 69 ntBASIC-0.15□□□□□ -2.43
Q9CR55 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.15□□□□□ -2.43
Q9CR55 Snord85-201ENSMUST00000083262 73 ntBASIC-0.15□□□□□ -2.43
Q9CR55 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.15□□□□□ -2.43
Q9CR55 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.16□□□□□ -2.43
Q9CR55 Snord100-201ENSMUST00000116836 74 ntBASIC-0.16□□□□□ -2.44
Q9CR55 Gm14567-201ENSMUST00000117155 174 ntBASIC-0.16□□□□□ -2.44
Q9CR55 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC-0.16□□□□□ -2.44
Q9CR55 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.16□□□□□ -2.44
Q9CR55 Gm16550-201ENSMUST00000162550 126 ntBASIC-0.16□□□□□ -2.44
Q9CR55 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.16□□□□□ -2.44
Q9CR55 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.16□□□□□ -2.44
Q9CR55 Mir191-201ENSMUST00000196210 74 ntBASIC-0.16□□□□□ -2.44
Q9CR55 Gm44989-201ENSMUST00000204749 217 ntBASIC-0.16□□□□□ -2.44
Q9CR55 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.16□□□□□ -2.44
Q9CR55 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.16□□□□□ -2.44
Q9CR55 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.17□□□□□ -2.44
Q9CR55 Scarna9-201ENSMUST00000104318 70 ntBASIC-0.17□□□□□ -2.44
Q9CR55 Gm22709-201ENSMUST00000116893 111 ntBASIC-0.17□□□□□ -2.44
Q9CR55 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.17□□□□□ -2.44
Q9CR55 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.17□□□□□ -2.44
Q9CR55 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.17□□□□□ -2.44
Q9CR55 Gm26160-201ENSMUST00000158965 63 ntBASIC-0.17□□□□□ -2.44
Q9CR55 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.17□□□□□ -2.44
Q9CR55 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.17□□□□□ -2.44
Q9CR55 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.17□□□□□ -2.44
Q9CR55 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.17□□□□□ -2.44
Q9CR55 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.17□□□□□ -2.44
Q9CR55 Gm37586-201ENSMUST00000193654 204 ntBASIC-0.17□□□□□ -2.44
Q9CR55 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-0.17□□□□□ -2.44
Q9CR55 AC159093.2-201ENSMUST00000227881 297 ntBASIC-0.17□□□□□ -2.44
Q9CR55 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
Q9CR55 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.17□□□□□ -2.44
Q9CR55 Mir489-201ENSMUST00000093599 107 ntBASIC-0.17□□□□□ -2.44
Q9CR55 Gm24250-201ENSMUST00000157320 135 ntBASIC-0.18□□□□□ -2.44
Q9CR55 Gm23770-201ENSMUST00000178009 108 ntBASIC-0.18□□□□□ -2.44
Q9CR55 Gm22832-201ENSMUST00000178022 108 ntBASIC-0.18□□□□□ -2.44
Q9CR55 Gm23863-201ENSMUST00000178265 108 ntBASIC-0.18□□□□□ -2.44
Q9CR55 Gm24828-201ENSMUST00000178507 108 ntBASIC-0.18□□□□□ -2.44
Q9CR55 Gm23052-201ENSMUST00000178633 108 ntBASIC-0.18□□□□□ -2.44
Q9CR55 Gm25729-201ENSMUST00000179050 108 ntBASIC-0.18□□□□□ -2.44
Q9CR55 Gm25359-201ENSMUST00000179315 108 ntBASIC-0.18□□□□□ -2.44
Q9CR55 Gm22624-201ENSMUST00000179913 108 ntBASIC-0.18□□□□□ -2.44
Q9CR55 Gm28016-201ENSMUST00000184594 196 ntBASIC-0.18□□□□□ -2.44
Q9CR55 Gm42795-201ENSMUST00000198847 76 ntBASIC-0.18□□□□□ -2.44
Q9CR55 AC116460.1-201ENSMUST00000219040 313 ntBASIC-0.18□□□□□ -2.44
Q9CR55 Gm26447-201ENSMUST00000082448 129 ntBASIC-0.18□□□□□ -2.44
Q9CR55 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.18□□□□□ -2.44
Q9CR55 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.18□□□□□ -2.44
Q9CR55 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC-0.18□□□□□ -2.44
Q9CR55 Gm26420-201ENSMUST00000104273 103 ntBASIC-0.19□□□□□ -2.44
Q9CR55 Gm15654-201ENSMUST00000152660 300 ntBASIC-0.19□□□□□ -2.44
Q9CR55 Gm22557-201ENSMUST00000157804 102 ntBASIC-0.19□□□□□ -2.44
Q9CR55 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.19□□□□□ -2.44
Q9CR55 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.19□□□□□ -2.44
Q9CR55 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC-0.19□□□□□ -2.44
Q9CR55 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.19□□□□□ -2.44
Q9CR55 Gm14626-201ENSMUST00000117619 216 ntBASIC-0.2□□□□□ -2.44
Q9CR55 Gm25223-201ENSMUST00000158200 110 ntBASIC-0.2□□□□□ -2.44
Q9CR55 Gm25364-201ENSMUST00000158851 107 ntBASIC-0.2□□□□□ -2.44
Q9CR55 Mir30f-201ENSMUST00000196073 92 ntBASIC-0.2□□□□□ -2.44
Q9CR55 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.2□□□□□ -2.44
Q9CR55 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.2□□□□□ -2.44
Q9CR55 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.2□□□□□ -2.44
Q9CR55 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.2□□□□□ -2.44
Q9CR55 Mir18-201ENSMUST00000083469 96 ntBASIC-0.2□□□□□ -2.44
Q9CR55 Mir186-201ENSMUST00000083497 71 ntBASIC-0.2□□□□□ -2.44
Q9CR55 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.21□□□□□ -2.44
Q9CR55 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.21□□□□□ -2.44
Q9CR55 Gm25111-201ENSMUST00000116686 147 ntBASIC-0.21□□□□□ -2.44
Q9CR55 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.21□□□□□ -2.44
Q9CR55 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 132.9 ms