Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm15654-201ENSMUST00000152660 300 ntBASIC-0.61□□□□□ -2.51
Rpa3Q9CQ71 Gm23770-201ENSMUST00000178009 108 ntBASIC-0.61□□□□□ -2.51
Rpa3Q9CQ71 Gm22832-201ENSMUST00000178022 108 ntBASIC-0.61□□□□□ -2.51
Rpa3Q9CQ71 Gm23863-201ENSMUST00000178265 108 ntBASIC-0.61□□□□□ -2.51
Rpa3Q9CQ71 Gm24828-201ENSMUST00000178507 108 ntBASIC-0.61□□□□□ -2.51
Rpa3Q9CQ71 Gm23052-201ENSMUST00000178633 108 ntBASIC-0.61□□□□□ -2.51
Rpa3Q9CQ71 Gm25729-201ENSMUST00000179050 108 ntBASIC-0.61□□□□□ -2.51
Rpa3Q9CQ71 Gm25359-201ENSMUST00000179315 108 ntBASIC-0.61□□□□□ -2.51
Rpa3Q9CQ71 Gm22624-201ENSMUST00000179913 108 ntBASIC-0.61□□□□□ -2.51
Rpa3Q9CQ71 Gm29512-201ENSMUST00000185544 315 ntBASIC-0.61□□□□□ -2.51
Rpa3Q9CQ71 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.61□□□□□ -2.51
Rpa3Q9CQ71 AC125374.2-201ENSMUST00000214278 162 ntBASIC-0.61□□□□□ -2.51
Rpa3Q9CQ71 AC154296.2-201ENSMUST00000214696 545 ntBASIC-0.61□□□□□ -2.51
Rpa3Q9CQ71 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.62□□□□□ -2.51
Rpa3Q9CQ71 Gm26293-201ENSMUST00000104170 84 ntBASIC-0.62□□□□□ -2.51
Rpa3Q9CQ71 Gm12469-201ENSMUST00000117623 207 ntBASIC-0.62□□□□□ -2.51
Rpa3Q9CQ71 Gm14919-201ENSMUST00000120839 390 ntBASIC-0.62□□□□□ -2.51
Rpa3Q9CQ71 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.62□□□□□ -2.51
Rpa3Q9CQ71 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.62□□□□□ -2.51
Rpa3Q9CQ71 Mir327-201ENSMUST00000199328 69 ntBASIC-0.62□□□□□ -2.51
Rpa3Q9CQ71 Gm42594-201ENSMUST00000199511 246 ntBASIC-0.62□□□□□ -2.51
Rpa3Q9CQ71 Gm22985-201ENSMUST00000122754 116 ntBASIC-0.64□□□□□ -2.51
Rpa3Q9CQ71 Gm24761-201ENSMUST00000179589 127 ntBASIC-0.64□□□□□ -2.51
Rpa3Q9CQ71 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC-0.64□□□□□ -2.51
Rpa3Q9CQ71 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-0.64□□□□□ -2.51
Rpa3Q9CQ71 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.64□□□□□ -2.51
Rpa3Q9CQ71 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.64□□□□□ -2.51
Rpa3Q9CQ71 Gm22738-201ENSMUST00000083440 147 ntBASIC-0.64□□□□□ -2.51
Rpa3Q9CQ71 CT030170.3-201ENSMUST00000221205 1815 ntBASIC-0.65□□□□□ -2.51
Rpa3Q9CQ71 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.65□□□□□ -2.51
Rpa3Q9CQ71 Gm24288-201ENSMUST00000157630 144 ntBASIC-0.65□□□□□ -2.51
Rpa3Q9CQ71 Gm25024-201ENSMUST00000179667 104 ntBASIC-0.65□□□□□ -2.51
Rpa3Q9CQ71 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.65□□□□□ -2.51
Rpa3Q9CQ71 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC-0.65□□□□□ -2.51
Rpa3Q9CQ71 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC-0.65□□□□□ -2.51
Rpa3Q9CQ71 AC159619.2-201ENSMUST00000222924 401 ntBASIC-0.65□□□□□ -2.51
Rpa3Q9CQ71 AC108945.1-201ENSMUST00000226477 94 ntBASIC-0.65□□□□□ -2.51
Rpa3Q9CQ71 Gm26081-201ENSMUST00000104068 132 ntBASIC-0.66□□□□□ -2.52
Rpa3Q9CQ71 Gm14567-201ENSMUST00000117155 174 ntBASIC-0.66□□□□□ -2.52
Rpa3Q9CQ71 Gm28489-201ENSMUST00000186655 316 ntBASIC-0.66□□□□□ -2.52
Rpa3Q9CQ71 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC-0.66□□□□□ -2.52
Rpa3Q9CQ71 Gm19790-201ENSMUST00000214414 251 ntBASIC-0.66□□□□□ -2.52
Rpa3Q9CQ71 Gm24276-201ENSMUST00000102181 110 ntBASIC-0.67□□□□□ -2.52
Rpa3Q9CQ71 Gm24867-201ENSMUST00000104161 107 ntBASIC-0.67□□□□□ -2.52
Rpa3Q9CQ71 Gm26255-201ENSMUST00000122492 103 ntBASIC-0.67□□□□□ -2.52
Rpa3Q9CQ71 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.67□□□□□ -2.52
Rpa3Q9CQ71 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.67□□□□□ -2.52
Rpa3Q9CQ71 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.67□□□□□ -2.52
Rpa3Q9CQ71 Gm44807-201ENSMUST00000206115 154 ntBASIC-0.67□□□□□ -2.52
Rpa3Q9CQ71 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.67□□□□□ -2.52
Rpa3Q9CQ71 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.67□□□□□ -2.52
Rpa3Q9CQ71 Mir183-201ENSMUST00000083685 70 ntBASIC-0.67□□□□□ -2.52
Rpa3Q9CQ71 AC154506.4-201ENSMUST00000224898 3416 ntBASIC-0.67□□□□□ -2.52
Rpa3Q9CQ71 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.68□□□□□ -2.52
Rpa3Q9CQ71 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.68□□□□□ -2.52
Rpa3Q9CQ71 Gm23020-201ENSMUST00000158766 253 ntBASIC-0.68□□□□□ -2.52
Rpa3Q9CQ71 Gm28418-201ENSMUST00000186179 423 ntBASIC-0.68□□□□□ -2.52
Rpa3Q9CQ71 AC116460.1-201ENSMUST00000219040 313 ntBASIC-0.68□□□□□ -2.52
Rpa3Q9CQ71 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.68□□□□□ -2.52
Rpa3Q9CQ71 Gm14626-201ENSMUST00000117619 216 ntBASIC-0.69□□□□□ -2.52
Rpa3Q9CQ71 Gm12748-201ENSMUST00000120763 504 ntBASIC-0.69□□□□□ -2.52
Rpa3Q9CQ71 Gm22100-201ENSMUST00000157926 63 ntBASIC-0.69□□□□□ -2.52
Rpa3Q9CQ71 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.69□□□□□ -2.52
Rpa3Q9CQ71 Gm25769-201ENSMUST00000158569 127 ntBASIC-0.69□□□□□ -2.52
Rpa3Q9CQ71 Gm38109-201ENSMUST00000195386 181 ntBASIC-0.69□□□□□ -2.52
Rpa3Q9CQ71 Gm22784-201ENSMUST00000104088 132 ntBASIC-0.7□□□□□ -2.52
Rpa3Q9CQ71 Gm25497-201ENSMUST00000104425 132 ntBASIC-0.7□□□□□ -2.52
Rpa3Q9CQ71 Snord100-201ENSMUST00000116836 74 ntBASIC-0.7□□□□□ -2.52
Rpa3Q9CQ71 Gm24392-201ENSMUST00000158136 103 ntBASIC-0.7□□□□□ -2.52
Rpa3Q9CQ71 Gm24498-201ENSMUST00000158445 102 ntBASIC-0.7□□□□□ -2.52
Rpa3Q9CQ71 Gm24667-201ENSMUST00000158938 103 ntBASIC-0.7□□□□□ -2.52
Rpa3Q9CQ71 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC-0.7□□□□□ -2.52
Rpa3Q9CQ71 Trav5-2-201ENSMUST00000199855 280 ntBASIC-0.7□□□□□ -2.52
Rpa3Q9CQ71 Gm45005-201ENSMUST00000206640 157 ntBASIC-0.7□□□□□ -2.52
Rpa3Q9CQ71 AC164117.2-201ENSMUST00000222090 327 ntBASIC-0.7□□□□□ -2.52
Rpa3Q9CQ71 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.7□□□□□ -2.52
Rpa3Q9CQ71 Gm25664-201ENSMUST00000157697 107 ntBASIC-0.71□□□□□ -2.52
Rpa3Q9CQ71 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.71□□□□□ -2.52
Rpa3Q9CQ71 Gm25600-201ENSMUST00000158357 106 ntBASIC-0.71□□□□□ -2.52
Rpa3Q9CQ71 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.71□□□□□ -2.52
Rpa3Q9CQ71 Gm27317-201ENSMUST00000183533 95 ntBASIC-0.71□□□□□ -2.52
Rpa3Q9CQ71 Gm44468-201ENSMUST00000199516 105 ntBASIC-0.71□□□□□ -2.52
Rpa3Q9CQ71 Gm5002-201ENSMUST00000207145 223 ntBASIC-0.71□□□□□ -2.52
Rpa3Q9CQ71 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-0.71□□□□□ -2.52
Rpa3Q9CQ71 Gm26497-201ENSMUST00000083146 107 ntBASIC-0.71□□□□□ -2.52
Rpa3Q9CQ71 Mir218-1-201ENSMUST00000083669 110 ntBASIC-0.71□□□□□ -2.52
Rpa3Q9CQ71 Mir20b-201ENSMUST00000102087 80 ntBASIC-0.72□□□□□ -2.52
Rpa3Q9CQ71 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-0.72□□□□□ -2.52
Rpa3Q9CQ71 Gm15030-201ENSMUST00000119804 484 ntBASIC-0.72□□□□□ -2.52
Rpa3Q9CQ71 Gm24129-201ENSMUST00000158537 97 ntBASIC-0.72□□□□□ -2.52
Rpa3Q9CQ71 Gm26287-201ENSMUST00000158887 81 ntBASIC-0.72□□□□□ -2.52
Rpa3Q9CQ71 Gm25610-201ENSMUST00000104016 129 ntBASIC-0.73□□□□□ -2.53
Rpa3Q9CQ71 Gm26420-201ENSMUST00000104273 103 ntBASIC-0.73□□□□□ -2.53
Rpa3Q9CQ71 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC-0.73□□□□□ -2.53
Rpa3Q9CQ71 Gm22433-201ENSMUST00000158550 142 ntBASIC-0.73□□□□□ -2.53
Rpa3Q9CQ71 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC-0.73□□□□□ -2.53
Rpa3Q9CQ71 Gm28927-201ENSMUST00000191528 272 ntBASIC-0.73□□□□□ -2.53
Rpa3Q9CQ71 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.73□□□□□ -2.53
Rpa3Q9CQ71 Mir669p-2-201ENSMUST00000103868 87 ntBASIC-0.74□□□□□ -2.53
Rpa3Q9CQ71 Mir669p-1-201ENSMUST00000103884 87 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 76,532 protein–RNA pairs in 161.6 ms