Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Gm23197-201ENSMUST00000158809 112 ntBASIC1.93□□□□□ -2.1
Pcdha1Q91Y21 Gm25838-201ENSMUST00000158920 120 ntBASIC1.93□□□□□ -2.1
Pcdha1Q91Y21 Gm25035-201ENSMUST00000175414 77 ntBASIC1.93□□□□□ -2.1
Pcdha1Q91Y21 Gm24572-201ENSMUST00000175505 88 ntBASIC1.93□□□□□ -2.1
Pcdha1Q91Y21 Gm44408-201ENSMUST00000200205 66 ntBASIC1.93□□□□□ -2.1
Pcdha1Q91Y21 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.93□□□□□ -2.1
Pcdha1Q91Y21 mt-Ts2-201ENSMUST00000082416 59 ntBASIC1.93□□□□□ -2.1
Pcdha1Q91Y21 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Pcdha1Q91Y21 Mir223-201ENSMUST00000102112 110 ntBASIC1.92□□□□□ -2.1
Pcdha1Q91Y21 Gm25090-201ENSMUST00000104000 132 ntBASIC1.92□□□□□ -2.1
Pcdha1Q91Y21 Gm14674-201ENSMUST00000117816 342 ntBASIC1.92□□□□□ -2.1
Pcdha1Q91Y21 Gm23644-201ENSMUST00000157856 77 ntBASIC1.92□□□□□ -2.1
Pcdha1Q91Y21 Gm22200-201ENSMUST00000158614 67 ntBASIC1.92□□□□□ -2.1
Pcdha1Q91Y21 Snora24-201ENSMUST00000174989 130 ntBASIC1.92□□□□□ -2.1
Pcdha1Q91Y21 Mir6352-201ENSMUST00000184495 116 ntBASIC1.92□□□□□ -2.1
Pcdha1Q91Y21 Gm28256-201ENSMUST00000188953 139 ntBASIC1.92□□□□□ -2.1
Pcdha1Q91Y21 Gm28559-201ENSMUST00000190532 139 ntBASIC1.92□□□□□ -2.1
Pcdha1Q91Y21 Gm44462-201ENSMUST00000199696 129 ntBASIC1.92□□□□□ -2.1
Pcdha1Q91Y21 Gm23299-201ENSMUST00000082708 79 ntBASIC1.92□□□□□ -2.1
Pcdha1Q91Y21 Snord14a-201ENSMUST00000082807 87 ntBASIC1.92□□□□□ -2.1
Pcdha1Q91Y21 Gm25038-201ENSMUST00000082928 130 ntBASIC1.92□□□□□ -2.1
Pcdha1Q91Y21 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Pcdha1Q91Y21 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Pcdha1Q91Y21 Gm26081-201ENSMUST00000104068 132 ntBASIC1.91□□□□□ -2.1
Pcdha1Q91Y21 Gm23170-201ENSMUST00000157158 106 ntBASIC1.91□□□□□ -2.1
Pcdha1Q91Y21 Gm24229-201ENSMUST00000158830 118 ntBASIC1.91□□□□□ -2.1
Pcdha1Q91Y21 Gm23813-201ENSMUST00000175153 77 ntBASIC1.91□□□□□ -2.1
Pcdha1Q91Y21 Gm27544-201ENSMUST00000185069 155 ntBASIC1.91□□□□□ -2.1
Pcdha1Q91Y21 Gm44807-201ENSMUST00000206115 154 ntBASIC1.91□□□□□ -2.1
Pcdha1Q91Y21 Gm25610-201ENSMUST00000104016 129 ntBASIC1.9□□□□□ -2.11
Pcdha1Q91Y21 Gm22490-201ENSMUST00000157188 119 ntBASIC1.9□□□□□ -2.11
Pcdha1Q91Y21 Gm22213-201ENSMUST00000157564 119 ntBASIC1.9□□□□□ -2.11
Pcdha1Q91Y21 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Pcdha1Q91Y21 Mir544-201ENSMUST00000103813 78 ntBASIC1.89□□□□□ -2.11
Pcdha1Q91Y21 Gm22494-201ENSMUST00000104495 128 ntBASIC1.89□□□□□ -2.11
Pcdha1Q91Y21 Gm23654-201ENSMUST00000116758 126 ntBASIC1.89□□□□□ -2.11
Pcdha1Q91Y21 Mir7675-201ENSMUST00000184262 58 ntBASIC1.89□□□□□ -2.11
Pcdha1Q91Y21 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.89□□□□□ -2.11
Pcdha1Q91Y21 Snora41-201ENSMUST00000082668 132 ntBASIC1.89□□□□□ -2.11
Pcdha1Q91Y21 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.89□□□□□ -2.11
Pcdha1Q91Y21 Gm24770-201ENSMUST00000158505 92 ntBASIC1.88□□□□□ -2.11
Pcdha1Q91Y21 Gm23289-201ENSMUST00000175615 108 ntBASIC1.88□□□□□ -2.11
Pcdha1Q91Y21 Gm37778-201ENSMUST00000191732 190 ntBASIC1.88□□□□□ -2.11
Pcdha1Q91Y21 Gm45429-201ENSMUST00000209527 172 ntBASIC1.88□□□□□ -2.11
Pcdha1Q91Y21 Gm27898-201ENSMUST00000183987 80 ntBASIC1.87□□□□□ -2.11
Pcdha1Q91Y21 Mir6905-201ENSMUST00000184228 70 ntBASIC1.87□□□□□ -2.11
Pcdha1Q91Y21 Gm43324-201ENSMUST00000197482 289 ntBASIC1.87□□□□□ -2.11
Pcdha1Q91Y21 AC124687.1-201ENSMUST00000221868 189 ntBASIC1.87□□□□□ -2.11
Pcdha1Q91Y21 Gm25636-201ENSMUST00000082666 133 ntBASIC1.87□□□□□ -2.11
Pcdha1Q91Y21 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Pcdha1Q91Y21 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
Pcdha1Q91Y21 Gm22031-201ENSMUST00000116945 126 ntBASIC1.86□□□□□ -2.11
Pcdha1Q91Y21 Gm25678-201ENSMUST00000174984 73 ntBASIC1.86□□□□□ -2.11
Pcdha1Q91Y21 Gm23419-201ENSMUST00000175523 84 ntBASIC1.86□□□□□ -2.11
Pcdha1Q91Y21 Gm22638-201ENSMUST00000179674 107 ntBASIC1.86□□□□□ -2.11
Pcdha1Q91Y21 Traj61-201ENSMUST00000165025 72 ntBASIC1.85□□□□□ -2.11
Pcdha1Q91Y21 Gm25380-201ENSMUST00000175463 107 ntBASIC1.85□□□□□ -2.11
Pcdha1Q91Y21 Gm22802-201ENSMUST00000175621 89 ntBASIC1.85□□□□□ -2.11
Pcdha1Q91Y21 Gm24641-201ENSMUST00000178055 107 ntBASIC1.85□□□□□ -2.11
Pcdha1Q91Y21 Gm25484-201ENSMUST00000178217 107 ntBASIC1.85□□□□□ -2.11
Pcdha1Q91Y21 Gm26138-201ENSMUST00000179236 107 ntBASIC1.85□□□□□ -2.11
Pcdha1Q91Y21 Gm22821-201ENSMUST00000179288 107 ntBASIC1.85□□□□□ -2.11
Pcdha1Q91Y21 Gm28270-201ENSMUST00000188550 109 ntBASIC1.85□□□□□ -2.11
Pcdha1Q91Y21 Gm28328-201ENSMUST00000188869 109 ntBASIC1.85□□□□□ -2.11
Pcdha1Q91Y21 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.85□□□□□ -2.11
Pcdha1Q91Y21 Gm23140-201ENSMUST00000082487 107 ntBASIC1.85□□□□□ -2.11
Pcdha1Q91Y21 Gm23377-201ENSMUST00000082943 126 ntBASIC1.85□□□□□ -2.11
Pcdha1Q91Y21 Gm23298-201ENSMUST00000083181 107 ntBASIC1.85□□□□□ -2.11
Pcdha1Q91Y21 Gm24614-201ENSMUST00000083269 107 ntBASIC1.85□□□□□ -2.11
Pcdha1Q91Y21 Gm22057-201ENSMUST00000083387 107 ntBASIC1.85□□□□□ -2.11
Pcdha1Q91Y21 Gm25516-201ENSMUST00000083857 107 ntBASIC1.85□□□□□ -2.11
Pcdha1Q91Y21 Gm22772-201ENSMUST00000104451 121 ntBASIC1.84□□□□□ -2.11
Pcdha1Q91Y21 Gm24984-201ENSMUST00000104454 133 ntBASIC1.84□□□□□ -2.11
Pcdha1Q91Y21 Gm25978-201ENSMUST00000158698 90 ntBASIC1.84□□□□□ -2.11
Pcdha1Q91Y21 Gm22929-201ENSMUST00000175517 107 ntBASIC1.84□□□□□ -2.11
Pcdha1Q91Y21 Gm23507-201ENSMUST00000083078 107 ntBASIC1.84□□□□□ -2.11
Pcdha1Q91Y21 Snord1a-201ENSMUST00000083160 74 ntBASIC1.84□□□□□ -2.11
Pcdha1Q91Y21 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.84□□□□□ -2.12
Pcdha1Q91Y21 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Pcdha1Q91Y21 Gm23106-201ENSMUST00000157554 101 ntBASIC1.83□□□□□ -2.12
Pcdha1Q91Y21 Gm16550-201ENSMUST00000162550 126 ntBASIC1.83□□□□□ -2.12
Pcdha1Q91Y21 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.83□□□□□ -2.12
Pcdha1Q91Y21 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Pcdha1Q91Y21 Gm24151-201ENSMUST00000082758 141 ntBASIC1.83□□□□□ -2.12
Pcdha1Q91Y21 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Pcdha1Q91Y21 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.82□□□□□ -2.12
Pcdha1Q91Y21 Gm22556-201ENSMUST00000157803 100 ntBASIC1.82□□□□□ -2.12
Pcdha1Q91Y21 Gm24076-201ENSMUST00000158179 94 ntBASIC1.82□□□□□ -2.12
Pcdha1Q91Y21 Gm22914-201ENSMUST00000175195 77 ntBASIC1.82□□□□□ -2.12
Pcdha1Q91Y21 Gm24638-201ENSMUST00000179807 132 ntBASIC1.82□□□□□ -2.12
Pcdha1Q91Y21 Gm44384-201ENSMUST00000200208 114 ntBASIC1.82□□□□□ -2.12
Pcdha1Q91Y21 Snora2b-201ENSMUST00000084005 137 ntBASIC1.82□□□□□ -2.12
Pcdha1Q91Y21 Gm22761-201ENSMUST00000102278 96 ntBASIC1.81□□□□□ -2.12
Pcdha1Q91Y21 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Pcdha1Q91Y21 Gm24783-201ENSMUST00000157639 100 ntBASIC1.81□□□□□ -2.12
Pcdha1Q91Y21 Gm25329-201ENSMUST00000158041 126 ntBASIC1.81□□□□□ -2.12
Pcdha1Q91Y21 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.81□□□□□ -2.12
Pcdha1Q91Y21 Mir6995-201ENSMUST00000183658 71 ntBASIC1.81□□□□□ -2.12
Pcdha1Q91Y21 Gm22004-201ENSMUST00000101884 107 ntBASIC1.8□□□□□ -2.12
Pcdha1Q91Y21 Gm24468-201ENSMUST00000104489 104 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 138.6 ms