Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm23253-201ENSMUST00000157441 104 ntBASIC1.24□□□□□ -2.21
H1fooQ8VIK3 Gm23558-201ENSMUST00000157823 80 ntBASIC1.24□□□□□ -2.21
H1fooQ8VIK3 Gm22129-201ENSMUST00000179034 107 ntBASIC1.24□□□□□ -2.21
H1fooQ8VIK3 Gm27493-201ENSMUST00000184128 78 ntBASIC1.24□□□□□ -2.21
H1fooQ8VIK3 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
H1fooQ8VIK3 Gm23245-201ENSMUST00000083370 135 ntBASIC1.24□□□□□ -2.21
H1fooQ8VIK3 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.23□□□□□ -2.21
H1fooQ8VIK3 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC1.23□□□□□ -2.21
H1fooQ8VIK3 Gm22963-201ENSMUST00000157960 91 ntBASIC1.23□□□□□ -2.21
H1fooQ8VIK3 Gm23763-201ENSMUST00000158345 60 ntBASIC1.23□□□□□ -2.21
H1fooQ8VIK3 Gm23504-201ENSMUST00000158988 95 ntBASIC1.23□□□□□ -2.21
H1fooQ8VIK3 Gm25958-201ENSMUST00000175114 71 ntBASIC1.23□□□□□ -2.21
H1fooQ8VIK3 Mir3087-201ENSMUST00000199405 56 ntBASIC1.23□□□□□ -2.21
H1fooQ8VIK3 CT485607.2-201ENSMUST00000214650 91 ntBASIC1.23□□□□□ -2.21
H1fooQ8VIK3 Mir320-201ENSMUST00000083594 82 ntBASIC1.23□□□□□ -2.21
H1fooQ8VIK3 Gm24449-201ENSMUST00000083985 106 ntBASIC1.23□□□□□ -2.21
H1fooQ8VIK3 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
H1fooQ8VIK3 Gm25610-201ENSMUST00000104016 129 ntBASIC1.22□□□□□ -2.21
H1fooQ8VIK3 Gm23130-201ENSMUST00000104252 74 ntBASIC1.22□□□□□ -2.21
H1fooQ8VIK3 Gm22559-201ENSMUST00000157329 134 ntBASIC1.22□□□□□ -2.21
H1fooQ8VIK3 Mir1961-201ENSMUST00000158643 112 ntBASIC1.22□□□□□ -2.21
H1fooQ8VIK3 AC158982.2-201ENSMUST00000226283 184 ntBASIC1.22□□□□□ -2.21
H1fooQ8VIK3 Gm22681-201ENSMUST00000083853 106 ntBASIC1.22□□□□□ -2.21
H1fooQ8VIK3 Gm10351-201ENSMUST00000087694 125 ntBASIC1.22□□□□□ -2.21
H1fooQ8VIK3 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.21□□□□□ -2.22
H1fooQ8VIK3 Gm24509-201ENSMUST00000157086 101 ntBASIC1.21□□□□□ -2.22
H1fooQ8VIK3 Gm25358-201ENSMUST00000157189 101 ntBASIC1.21□□□□□ -2.22
H1fooQ8VIK3 Gm23838-201ENSMUST00000158067 162 ntBASIC1.21□□□□□ -2.22
H1fooQ8VIK3 Gm22663-201ENSMUST00000158721 102 ntBASIC1.21□□□□□ -2.22
H1fooQ8VIK3 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
H1fooQ8VIK3 Gm27711-201ENSMUST00000183802 118 ntBASIC1.21□□□□□ -2.22
H1fooQ8VIK3 Gm22297-201ENSMUST00000083312 106 ntBASIC1.21□□□□□ -2.22
H1fooQ8VIK3 Gm25128-201ENSMUST00000083339 76 ntBASIC1.21□□□□□ -2.22
H1fooQ8VIK3 Gm23651-201ENSMUST00000116755 120 ntBASIC1.2□□□□□ -2.22
H1fooQ8VIK3 Gm20409-201ENSMUST00000173457 130 ntBASIC1.2□□□□□ -2.22
H1fooQ8VIK3 Gm27668-201ENSMUST00000184188 120 ntBASIC1.2□□□□□ -2.22
H1fooQ8VIK3 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC1.2□□□□□ -2.22
H1fooQ8VIK3 Gm44807-201ENSMUST00000206115 154 ntBASIC1.2□□□□□ -2.22
H1fooQ8VIK3 Gm25851-201ENSMUST00000082794 107 ntBASIC1.2□□□□□ -2.22
H1fooQ8VIK3 Mir709-201ENSMUST00000102190 88 ntBASIC1.19□□□□□ -2.22
H1fooQ8VIK3 Gm25832-201ENSMUST00000104140 130 ntBASIC1.19□□□□□ -2.22
H1fooQ8VIK3 Gm16186-201ENSMUST00000120132 216 ntBASIC1.19□□□□□ -2.22
H1fooQ8VIK3 Gm24718-201ENSMUST00000157521 136 ntBASIC1.19□□□□□ -2.22
H1fooQ8VIK3 Gm24717-201ENSMUST00000157522 124 ntBASIC1.19□□□□□ -2.22
H1fooQ8VIK3 Gm25425-201ENSMUST00000157611 96 ntBASIC1.19□□□□□ -2.22
H1fooQ8VIK3 Gm24401-201ENSMUST00000157868 91 ntBASIC1.19□□□□□ -2.22
H1fooQ8VIK3 Gm23221-201ENSMUST00000158118 93 ntBASIC1.19□□□□□ -2.22
H1fooQ8VIK3 Gm24221-201ENSMUST00000158833 313 ntBASIC1.19□□□□□ -2.22
H1fooQ8VIK3 Gm10813-201ENSMUST00000099936 90 ntBASIC1.19□□□□□ -2.22
H1fooQ8VIK3 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
H1fooQ8VIK3 Gm23653-201ENSMUST00000116751 97 ntBASIC1.18□□□□□ -2.22
H1fooQ8VIK3 Snord13-201ENSMUST00000157627 104 ntBASIC1.18□□□□□ -2.22
H1fooQ8VIK3 Gm22074-201ENSMUST00000158595 113 ntBASIC1.18□□□□□ -2.22
H1fooQ8VIK3 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
H1fooQ8VIK3 Gm24271-201ENSMUST00000102327 111 ntBASIC1.17□□□□□ -2.22
H1fooQ8VIK3 Gm22515-201ENSMUST00000158273 305 ntBASIC1.17□□□□□ -2.22
H1fooQ8VIK3 Gm22944-201ENSMUST00000158662 133 ntBASIC1.17□□□□□ -2.22
H1fooQ8VIK3 Gm24676-201ENSMUST00000158758 75 ntBASIC1.17□□□□□ -2.22
H1fooQ8VIK3 Gm14882-201ENSMUST00000117216 218 ntBASIC1.16□□□□□ -2.22
H1fooQ8VIK3 Gm23083-201ENSMUST00000157851 116 ntBASIC1.16□□□□□ -2.22
H1fooQ8VIK3 Mir7657-201ENSMUST00000196051 57 ntBASIC1.16□□□□□ -2.22
H1fooQ8VIK3 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.16□□□□□ -2.22
H1fooQ8VIK3 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.15□□□□□ -2.22
H1fooQ8VIK3 Gm15289-201ENSMUST00000117793 244 ntBASIC1.15□□□□□ -2.23
H1fooQ8VIK3 Gm23122-201ENSMUST00000157645 103 ntBASIC1.15□□□□□ -2.23
H1fooQ8VIK3 Gm22801-201ENSMUST00000175624 84 ntBASIC1.15□□□□□ -2.23
H1fooQ8VIK3 Gm23966-201ENSMUST00000179823 107 ntBASIC1.15□□□□□ -2.23
H1fooQ8VIK3 Gm27851-201ENSMUST00000183529 63 ntBASIC1.15□□□□□ -2.23
H1fooQ8VIK3 Snora41-201ENSMUST00000082668 132 ntBASIC1.15□□□□□ -2.23
H1fooQ8VIK3 Mir30c-2-201ENSMUST00000083633 84 ntBASIC1.15□□□□□ -2.23
H1fooQ8VIK3 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
H1fooQ8VIK3 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
H1fooQ8VIK3 Gm20118-201ENSMUST00000187207 162 ntBASIC1.14□□□□□ -2.23
H1fooQ8VIK3 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC1.14□□□□□ -2.23
H1fooQ8VIK3 Gm24311-201ENSMUST00000082570 104 ntBASIC1.14□□□□□ -2.23
H1fooQ8VIK3 Gm26454-201ENSMUST00000082682 107 ntBASIC1.14□□□□□ -2.23
H1fooQ8VIK3 Gm15654-201ENSMUST00000152660 300 ntBASIC1.13□□□□□ -2.23
H1fooQ8VIK3 Gm25367-201ENSMUST00000158846 106 ntBASIC1.13□□□□□ -2.23
H1fooQ8VIK3 Gm25831-201ENSMUST00000158924 163 ntBASIC1.13□□□□□ -2.23
H1fooQ8VIK3 Gm28794-201ENSMUST00000185276 136 ntBASIC1.13□□□□□ -2.23
H1fooQ8VIK3 Gm44483-201ENSMUST00000197203 97 ntBASIC1.13□□□□□ -2.23
H1fooQ8VIK3 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.13□□□□□ -2.23
H1fooQ8VIK3 Gm24616-201ENSMUST00000083274 139 ntBASIC1.13□□□□□ -2.23
H1fooQ8VIK3 Mir532-201ENSMUST00000093630 96 ntBASIC1.13□□□□□ -2.23
H1fooQ8VIK3 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
H1fooQ8VIK3 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.12□□□□□ -2.23
H1fooQ8VIK3 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.12□□□□□ -2.23
H1fooQ8VIK3 Mir30f-201ENSMUST00000196073 92 ntBASIC1.12□□□□□ -2.23
H1fooQ8VIK3 Gm26168-201ENSMUST00000083787 112 ntBASIC1.12□□□□□ -2.23
H1fooQ8VIK3 Gm25920-201ENSMUST00000158307 99 ntBASIC1.11□□□□□ -2.23
H1fooQ8VIK3 Gm24575-201ENSMUST00000175502 77 ntBASIC1.11□□□□□ -2.23
H1fooQ8VIK3 Gm22887-201ENSMUST00000178586 107 ntBASIC1.11□□□□□ -2.23
H1fooQ8VIK3 Gm44308-201ENSMUST00000197080 99 ntBASIC1.11□□□□□ -2.23
H1fooQ8VIK3 Mir410-201ENSMUST00000083563 81 ntBASIC1.11□□□□□ -2.23
H1fooQ8VIK3 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
H1fooQ8VIK3 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
H1fooQ8VIK3 Gm26080-201ENSMUST00000104069 131 ntBASIC1.1□□□□□ -2.23
H1fooQ8VIK3 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.1□□□□□ -2.23
H1fooQ8VIK3 Gm24842-201ENSMUST00000158681 54 ntBASIC1.1□□□□□ -2.23
H1fooQ8VIK3 Gm24167-201ENSMUST00000177733 124 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 263.9 ms