Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm22753-201ENSMUST00000083657 107 ntBASIC0.18□□□□□ -2.38
Cchcr1Q8K2I2 Gm12815-201ENSMUST00000121737 135 ntBASIC0.17□□□□□ -2.38
Cchcr1Q8K2I2 Gm23020-201ENSMUST00000158766 253 ntBASIC0.17□□□□□ -2.38
Cchcr1Q8K2I2 Gm22239-201ENSMUST00000175220 103 ntBASIC0.17□□□□□ -2.38
Cchcr1Q8K2I2 Gm27402-201ENSMUST00000183890 120 ntBASIC0.17□□□□□ -2.38
Cchcr1Q8K2I2 Gm28767-201ENSMUST00000188601 114 ntBASIC0.17□□□□□ -2.38
Cchcr1Q8K2I2 Mir3970-201ENSMUST00000199287 90 ntBASIC0.17□□□□□ -2.38
Cchcr1Q8K2I2 Mir146-201ENSMUST00000083667 65 ntBASIC0.17□□□□□ -2.38
Cchcr1Q8K2I2 Gm22048-201ENSMUST00000104721 89 ntBASIC0.16□□□□□ -2.38
Cchcr1Q8K2I2 Mir669d-2-201ENSMUST00000116854 86 ntBASIC0.16□□□□□ -2.38
Cchcr1Q8K2I2 Gm16186-201ENSMUST00000120132 216 ntBASIC0.16□□□□□ -2.38
Cchcr1Q8K2I2 Gm26026-201ENSMUST00000122726 123 ntBASIC0.16□□□□□ -2.38
Cchcr1Q8K2I2 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.16□□□□□ -2.38
Cchcr1Q8K2I2 Scarna8-201ENSMUST00000158333 131 ntBASIC0.16□□□□□ -2.38
Cchcr1Q8K2I2 Gm25769-201ENSMUST00000158569 127 ntBASIC0.16□□□□□ -2.38
Cchcr1Q8K2I2 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.16□□□□□ -2.38
Cchcr1Q8K2I2 Mir3089-201ENSMUST00000175350 84 ntBASIC0.16□□□□□ -2.38
Cchcr1Q8K2I2 Gm25464-201ENSMUST00000175481 107 ntBASIC0.16□□□□□ -2.38
Cchcr1Q8K2I2 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.16□□□□□ -2.38
Cchcr1Q8K2I2 Gm25895-201ENSMUST00000083714 100 ntBASIC0.16□□□□□ -2.38
Cchcr1Q8K2I2 Gm14883-201ENSMUST00000120179 157 ntBASIC0.15□□□□□ -2.39
Cchcr1Q8K2I2 Gm25720-201ENSMUST00000157503 105 ntBASIC0.15□□□□□ -2.39
Cchcr1Q8K2I2 Gm23036-201ENSMUST00000157885 99 ntBASIC0.15□□□□□ -2.39
Cchcr1Q8K2I2 Gm27993-201ENSMUST00000184362 85 ntBASIC0.15□□□□□ -2.39
Cchcr1Q8K2I2 Mir881-201ENSMUST00000104844 78 ntBASIC0.14□□□□□ -2.39
Cchcr1Q8K2I2 Mir3108-201ENSMUST00000175500 79 ntBASIC0.14□□□□□ -2.39
Cchcr1Q8K2I2 Gm23301-201ENSMUST00000082713 65 ntBASIC0.14□□□□□ -2.39
Cchcr1Q8K2I2 Mir186-201ENSMUST00000083497 71 ntBASIC0.14□□□□□ -2.39
Cchcr1Q8K2I2 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
Cchcr1Q8K2I2 Gm25364-201ENSMUST00000158851 107 ntBASIC0.13□□□□□ -2.39
Cchcr1Q8K2I2 Gm24488-201ENSMUST00000179934 127 ntBASIC0.13□□□□□ -2.39
Cchcr1Q8K2I2 Gm25701-201ENSMUST00000179988 127 ntBASIC0.13□□□□□ -2.39
Cchcr1Q8K2I2 Gm26431-201ENSMUST00000180199 127 ntBASIC0.13□□□□□ -2.39
Cchcr1Q8K2I2 Gm44457-201ENSMUST00000198109 76 ntBASIC0.13□□□□□ -2.39
Cchcr1Q8K2I2 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.13□□□□□ -2.39
Cchcr1Q8K2I2 Gm8508-201ENSMUST00000061226 363 ntBASIC0.13□□□□□ -2.39
Cchcr1Q8K2I2 Gm24460-201ENSMUST00000082731 106 ntBASIC0.13□□□□□ -2.39
Cchcr1Q8K2I2 Gm10172-201ENSMUST00000085929 558 ntBASIC0.13□□□□□ -2.39
Cchcr1Q8K2I2 Gm23841-201ENSMUST00000116951 114 ntBASIC0.12□□□□□ -2.39
Cchcr1Q8K2I2 Gm12686-201ENSMUST00000120546 397 ntBASIC0.12□□□□□ -2.39
Cchcr1Q8K2I2 n-R5s87-201ENSMUST00000122752 116 ntBASIC0.12□□□□□ -2.39
Cchcr1Q8K2I2 Gm28020-201ENSMUST00000157739 67 ntBASIC0.12□□□□□ -2.39
Cchcr1Q8K2I2 Gm22520-201ENSMUST00000158269 129 ntBASIC0.12□□□□□ -2.39
Cchcr1Q8K2I2 Gm23761-201ENSMUST00000158347 104 ntBASIC0.12□□□□□ -2.39
Cchcr1Q8K2I2 Gm16550-201ENSMUST00000162550 126 ntBASIC0.12□□□□□ -2.39
Cchcr1Q8K2I2 Mir100-201ENSMUST00000175270 80 ntBASIC0.12□□□□□ -2.39
Cchcr1Q8K2I2 Gm23567-201ENSMUST00000178005 107 ntBASIC0.12□□□□□ -2.39
Cchcr1Q8K2I2 Gm44989-201ENSMUST00000204749 217 ntBASIC0.12□□□□□ -2.39
Cchcr1Q8K2I2 Gm45859-201ENSMUST00000212794 214 ntBASIC0.12□□□□□ -2.39
Cchcr1Q8K2I2 Mir141-201ENSMUST00000083540 72 ntBASIC0.12□□□□□ -2.39
Cchcr1Q8K2I2 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.11□□□□□ -2.39
Cchcr1Q8K2I2 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
Cchcr1Q8K2I2 Mir541-201ENSMUST00000102097 90 ntBASIC0.11□□□□□ -2.39
Cchcr1Q8K2I2 Gm23749-201ENSMUST00000104223 131 ntBASIC0.11□□□□□ -2.39
Cchcr1Q8K2I2 Gm24250-201ENSMUST00000157320 135 ntBASIC0.11□□□□□ -2.39
Cchcr1Q8K2I2 Gm23770-201ENSMUST00000178009 108 ntBASIC0.11□□□□□ -2.39
Cchcr1Q8K2I2 Gm22832-201ENSMUST00000178022 108 ntBASIC0.11□□□□□ -2.39
Cchcr1Q8K2I2 Gm23863-201ENSMUST00000178265 108 ntBASIC0.11□□□□□ -2.39
Cchcr1Q8K2I2 Gm24828-201ENSMUST00000178507 108 ntBASIC0.11□□□□□ -2.39
Cchcr1Q8K2I2 Gm23052-201ENSMUST00000178633 108 ntBASIC0.11□□□□□ -2.39
Cchcr1Q8K2I2 Gm25729-201ENSMUST00000179050 108 ntBASIC0.11□□□□□ -2.39
Cchcr1Q8K2I2 Gm25359-201ENSMUST00000179315 108 ntBASIC0.11□□□□□ -2.39
Cchcr1Q8K2I2 Gm22624-201ENSMUST00000179913 108 ntBASIC0.11□□□□□ -2.39
Cchcr1Q8K2I2 mt-Ti-201ENSMUST00000082393 69 ntBASIC0.11□□□□□ -2.39
Cchcr1Q8K2I2 Mir411-201ENSMUST00000083543 82 ntBASIC0.11□□□□□ -2.39
Cchcr1Q8K2I2 Gm24030-201ENSMUST00000083931 164 ntBASIC0.11□□□□□ -2.39
Cchcr1Q8K2I2 Gm24121-201ENSMUST00000102029 106 ntBASIC0.1□□□□□ -2.39
Cchcr1Q8K2I2 Mir670-201ENSMUST00000102380 100 ntBASIC0.1□□□□□ -2.39
Cchcr1Q8K2I2 Gm26420-201ENSMUST00000104273 103 ntBASIC0.1□□□□□ -2.39
Cchcr1Q8K2I2 Snord19-201ENSMUST00000104609 76 ntBASIC0.1□□□□□ -2.39
Cchcr1Q8K2I2 Gm6897-201ENSMUST00000117714 138 ntBASIC0.1□□□□□ -2.39
Cchcr1Q8K2I2 Gm14758-201ENSMUST00000119104 138 ntBASIC0.1□□□□□ -2.39
Cchcr1Q8K2I2 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.1□□□□□ -2.39
Cchcr1Q8K2I2 Gm25885-201ENSMUST00000157779 109 ntBASIC0.1□□□□□ -2.39
Cchcr1Q8K2I2 Gm22557-201ENSMUST00000157804 102 ntBASIC0.1□□□□□ -2.39
Cchcr1Q8K2I2 Gm25952-201ENSMUST00000175329 74 ntBASIC0.1□□□□□ -2.39
Cchcr1Q8K2I2 Gm27943-201ENSMUST00000184844 116 ntBASIC0.1□□□□□ -2.39
Cchcr1Q8K2I2 Mir7229-201ENSMUST00000197062 53 ntBASIC0.1□□□□□ -2.39
Cchcr1Q8K2I2 AC165157.3-201ENSMUST00000220815 103 ntBASIC0.1□□□□□ -2.39
Cchcr1Q8K2I2 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC0.1□□□□□ -2.39
Cchcr1Q8K2I2 Gm25588-201ENSMUST00000082501 140 ntBASIC0.1□□□□□ -2.39
Cchcr1Q8K2I2 Snord60-201ENSMUST00000082834 78 ntBASIC0.1□□□□□ -2.39
Cchcr1Q8K2I2 Mir489-201ENSMUST00000093599 107 ntBASIC0.1□□□□□ -2.39
Cchcr1Q8K2I2 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
Cchcr1Q8K2I2 Gm25015-201ENSMUST00000158400 128 ntBASIC0.09□□□□□ -2.4
Cchcr1Q8K2I2 Mir6369-201ENSMUST00000183772 106 ntBASIC0.09□□□□□ -2.4
Cchcr1Q8K2I2 AC134601.1-201ENSMUST00000221058 109 ntBASIC0.09□□□□□ -2.4
Cchcr1Q8K2I2 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
Cchcr1Q8K2I2 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
Cchcr1Q8K2I2 Gm22744-201ENSMUST00000083444 65 ntBASIC0.09□□□□□ -2.4
Cchcr1Q8K2I2 Mir377-201ENSMUST00000083504 68 ntBASIC0.09□□□□□ -2.4
Cchcr1Q8K2I2 Gm24762-201ENSMUST00000083689 104 ntBASIC0.09□□□□□ -2.4
Cchcr1Q8K2I2 Mir1899-201ENSMUST00000122798 96 ntBASIC0.08□□□□□ -2.4
Cchcr1Q8K2I2 Gm10548-202ENSMUST00000165672 272 ntBASIC0.08□□□□□ -2.4
Cchcr1Q8K2I2 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC0.08□□□□□ -2.4
Cchcr1Q8K2I2 Gm27476-201ENSMUST00000183366 104 ntBASIC0.08□□□□□ -2.4
Cchcr1Q8K2I2 Gm42795-201ENSMUST00000198847 76 ntBASIC0.08□□□□□ -2.4
Cchcr1Q8K2I2 Gm44345-201ENSMUST00000199560 135 ntBASIC0.08□□□□□ -2.4
Cchcr1Q8K2I2 Mir721-201ENSMUST00000200230 88 ntBASIC0.08□□□□□ -2.4
Cchcr1Q8K2I2 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 155.1 ms