Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Brf1Q8CFK2 Gm25938-201ENSMUST00000104139 166 ntBASIC1.6□□□□□ -2.15
Brf1Q8CFK2 Gm23336-201ENSMUST00000117023 123 ntBASIC1.6□□□□□ -2.15
Brf1Q8CFK2 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.6□□□□□ -2.15
Brf1Q8CFK2 Gm27265-201ENSMUST00000183559 77 ntBASIC1.6□□□□□ -2.15
Brf1Q8CFK2 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.6□□□□□ -2.15
Brf1Q8CFK2 Gm25650-201ENSMUST00000083784 162 ntBASIC1.6□□□□□ -2.15
Brf1Q8CFK2 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Brf1Q8CFK2 Mir547-201ENSMUST00000102051 78 ntBASIC1.59□□□□□ -2.15
Brf1Q8CFK2 Mir653-201ENSMUST00000102402 85 ntBASIC1.59□□□□□ -2.15
Brf1Q8CFK2 Gm22785-201ENSMUST00000104087 132 ntBASIC1.59□□□□□ -2.15
Brf1Q8CFK2 Gm25541-201ENSMUST00000116888 126 ntBASIC1.59□□□□□ -2.15
Brf1Q8CFK2 Gm24926-201ENSMUST00000178053 79 ntBASIC1.59□□□□□ -2.15
Brf1Q8CFK2 Gm22632-201ENSMUST00000178266 79 ntBASIC1.59□□□□□ -2.15
Brf1Q8CFK2 Gm27898-201ENSMUST00000183987 80 ntBASIC1.59□□□□□ -2.15
Brf1Q8CFK2 Gm44462-201ENSMUST00000199696 129 ntBASIC1.59□□□□□ -2.15
Brf1Q8CFK2 Gm44807-201ENSMUST00000206115 154 ntBASIC1.59□□□□□ -2.15
Brf1Q8CFK2 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
Brf1Q8CFK2 Gm25091-201ENSMUST00000103997 71 ntBASIC1.58□□□□□ -2.16
Brf1Q8CFK2 Gm25610-201ENSMUST00000104016 129 ntBASIC1.58□□□□□ -2.16
Brf1Q8CFK2 Gm24586-201ENSMUST00000116695 89 ntBASIC1.58□□□□□ -2.16
Brf1Q8CFK2 Gm25663-201ENSMUST00000157698 135 ntBASIC1.58□□□□□ -2.16
Brf1Q8CFK2 Gm22708-201ENSMUST00000158987 103 ntBASIC1.58□□□□□ -2.16
Brf1Q8CFK2 Gm44308-201ENSMUST00000197080 99 ntBASIC1.58□□□□□ -2.16
Brf1Q8CFK2 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.57□□□□□ -2.16
Brf1Q8CFK2 Gm22828-201ENSMUST00000083768 107 ntBASIC1.57□□□□□ -2.16
Brf1Q8CFK2 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Brf1Q8CFK2 Gm25936-201ENSMUST00000179952 114 ntBASIC1.56□□□□□ -2.16
Brf1Q8CFK2 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.56□□□□□ -2.16
Brf1Q8CFK2 Mir211-201ENSMUST00000083651 106 ntBASIC1.56□□□□□ -2.16
Brf1Q8CFK2 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC1.55□□□□□ -2.16
Brf1Q8CFK2 Gm23434-201ENSMUST00000157179 100 ntBASIC1.55□□□□□ -2.16
Brf1Q8CFK2 Gm24916-201ENSMUST00000157287 79 ntBASIC1.55□□□□□ -2.16
Brf1Q8CFK2 Gm16550-201ENSMUST00000162550 126 ntBASIC1.55□□□□□ -2.16
Brf1Q8CFK2 Gm25820-201ENSMUST00000198589 127 ntBASIC1.55□□□□□ -2.16
Brf1Q8CFK2 Mir3087-201ENSMUST00000199405 56 ntBASIC1.55□□□□□ -2.16
Brf1Q8CFK2 Mir410-201ENSMUST00000083563 81 ntBASIC1.55□□□□□ -2.16
Brf1Q8CFK2 Gm24588-201ENSMUST00000116696 83 ntBASIC1.54□□□□□ -2.16
Brf1Q8CFK2 Gm22558-201ENSMUST00000157326 95 ntBASIC1.54□□□□□ -2.16
Brf1Q8CFK2 Gm23083-201ENSMUST00000157851 116 ntBASIC1.54□□□□□ -2.16
Brf1Q8CFK2 Gm24842-201ENSMUST00000158681 54 ntBASIC1.54□□□□□ -2.16
Brf1Q8CFK2 Mir7063-201ENSMUST00000184158 91 ntBASIC1.54□□□□□ -2.16
Brf1Q8CFK2 Gm28794-201ENSMUST00000185276 136 ntBASIC1.54□□□□□ -2.16
Brf1Q8CFK2 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.54□□□□□ -2.16
Brf1Q8CFK2 Snord96a-201ENSMUST00000082791 81 ntBASIC1.54□□□□□ -2.16
Brf1Q8CFK2 Gm24509-201ENSMUST00000157086 101 ntBASIC1.53□□□□□ -2.16
Brf1Q8CFK2 Gm25358-201ENSMUST00000157189 101 ntBASIC1.53□□□□□ -2.16
Brf1Q8CFK2 Gm37330-201ENSMUST00000192606 153 ntBASIC1.53□□□□□ -2.16
Brf1Q8CFK2 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC1.53□□□□□ -2.16
Brf1Q8CFK2 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.53□□□□□ -2.16
Brf1Q8CFK2 Gm24030-201ENSMUST00000083931 164 ntBASIC1.53□□□□□ -2.16
Brf1Q8CFK2 Gm12013-201ENSMUST00000121971 155 ntBASIC1.52□□□□□ -2.17
Brf1Q8CFK2 Gm24915-201ENSMUST00000157288 78 ntBASIC1.52□□□□□ -2.17
Brf1Q8CFK2 Gm24401-201ENSMUST00000157868 91 ntBASIC1.52□□□□□ -2.17
Brf1Q8CFK2 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.52□□□□□ -2.17
Brf1Q8CFK2 AC136457.1-201ENSMUST00000224195 156 ntBASIC1.52□□□□□ -2.17
Brf1Q8CFK2 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.52□□□□□ -2.17
Brf1Q8CFK2 Snord13-201ENSMUST00000157627 104 ntBASIC1.51□□□□□ -2.17
Brf1Q8CFK2 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.51□□□□□ -2.17
Brf1Q8CFK2 Gm22887-201ENSMUST00000178586 107 ntBASIC1.51□□□□□ -2.17
Brf1Q8CFK2 Gm23838-201ENSMUST00000158067 162 ntBASIC1.5□□□□□ -2.17
Brf1Q8CFK2 Gm37796-201ENSMUST00000195327 134 ntBASIC1.5□□□□□ -2.17
Brf1Q8CFK2 Gm22809-201ENSMUST00000082743 156 ntBASIC1.5□□□□□ -2.17
Brf1Q8CFK2 Gm26168-201ENSMUST00000083787 112 ntBASIC1.5□□□□□ -2.17
Brf1Q8CFK2 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Brf1Q8CFK2 Gm24865-201ENSMUST00000103246 96 ntBASIC1.49□□□□□ -2.17
Brf1Q8CFK2 Gm25759-201ENSMUST00000103988 129 ntBASIC1.49□□□□□ -2.17
Brf1Q8CFK2 Gm23766-201ENSMUST00000103894 80 ntBASIC1.48□□□□□ -2.17
Brf1Q8CFK2 Gm15654-201ENSMUST00000152660 300 ntBASIC1.48□□□□□ -2.17
Brf1Q8CFK2 Gm24913-201ENSMUST00000157286 107 ntBASIC1.48□□□□□ -2.17
Brf1Q8CFK2 Gm22551-201ENSMUST00000157795 103 ntBASIC1.48□□□□□ -2.17
Brf1Q8CFK2 Gm16307-201ENSMUST00000161269 210 ntBASIC1.48□□□□□ -2.17
Brf1Q8CFK2 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.48□□□□□ -2.17
Brf1Q8CFK2 Mir532-201ENSMUST00000093630 96 ntBASIC1.48□□□□□ -2.17
Brf1Q8CFK2 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Brf1Q8CFK2 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Brf1Q8CFK2 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Brf1Q8CFK2 Gm25992-201ENSMUST00000102437 109 ntBASIC1.47□□□□□ -2.17
Brf1Q8CFK2 Gm23907-201ENSMUST00000104595 189 ntBASIC1.47□□□□□ -2.17
Brf1Q8CFK2 Gm24894-201ENSMUST00000122744 118 ntBASIC1.47□□□□□ -2.17
Brf1Q8CFK2 Gm25329-201ENSMUST00000158041 126 ntBASIC1.47□□□□□ -2.17
Brf1Q8CFK2 Traj60-201ENSMUST00000167781 54 ntBASIC1.47□□□□□ -2.17
Brf1Q8CFK2 Mir3098-201ENSMUST00000175416 87 ntBASIC1.47□□□□□ -2.17
Brf1Q8CFK2 Gm26498-201ENSMUST00000177799 79 ntBASIC1.47□□□□□ -2.17
Brf1Q8CFK2 Gm8034-201ENSMUST00000178853 132 ntBASIC1.47□□□□□ -2.17
Brf1Q8CFK2 Gm26230-201ENSMUST00000180141 79 ntBASIC1.47□□□□□ -2.17
Brf1Q8CFK2 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.47□□□□□ -2.17
Brf1Q8CFK2 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.47□□□□□ -2.17
Brf1Q8CFK2 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC1.47□□□□□ -2.17
Brf1Q8CFK2 Snora41-201ENSMUST00000082668 132 ntBASIC1.47□□□□□ -2.17
Brf1Q8CFK2 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.47□□□□□ -2.17
Brf1Q8CFK2 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.46□□□□□ -2.18
Brf1Q8CFK2 Gm20118-201ENSMUST00000187207 162 ntBASIC1.46□□□□□ -2.18
Brf1Q8CFK2 Mir468-201ENSMUST00000197332 78 ntBASIC1.46□□□□□ -2.18
Brf1Q8CFK2 Gm42935-201ENSMUST00000202004 151 ntBASIC1.46□□□□□ -2.18
Brf1Q8CFK2 mt-Ts2-201ENSMUST00000082416 59 ntBASIC1.46□□□□□ -2.18
Brf1Q8CFK2 Gm25753-201ENSMUST00000116792 121 ntBASIC1.45□□□□□ -2.18
Brf1Q8CFK2 Gm14039-201ENSMUST00000118705 101 ntBASIC1.45□□□□□ -2.18
Brf1Q8CFK2 Traj61-201ENSMUST00000165025 72 ntBASIC1.45□□□□□ -2.18
Brf1Q8CFK2 Gm27420-201ENSMUST00000183823 79 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 178.1 ms