Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm23622-201ENSMUST00000082460 107 ntBASIC0.41□□□□□ -2.34
Ccdc38Q8CDN8 Gm23378-201ENSMUST00000082942 107 ntBASIC0.41□□□□□ -2.34
Ccdc38Q8CDN8 Gm22759-201ENSMUST00000102276 96 ntBASIC0.4□□□□□ -2.35
Ccdc38Q8CDN8 Gm22790-201ENSMUST00000157229 129 ntBASIC0.4□□□□□ -2.35
Ccdc38Q8CDN8 Gm27476-201ENSMUST00000183366 104 ntBASIC0.4□□□□□ -2.35
Ccdc38Q8CDN8 Gm45541-201ENSMUST00000210443 54 ntBASIC0.4□□□□□ -2.35
Ccdc38Q8CDN8 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.4□□□□□ -2.35
Ccdc38Q8CDN8 Gm22287-201ENSMUST00000083197 107 ntBASIC0.4□□□□□ -2.35
Ccdc38Q8CDN8 Gm25611-201ENSMUST00000104017 133 ntBASIC0.39□□□□□ -2.35
Ccdc38Q8CDN8 Gm22706-201ENSMUST00000157907 112 ntBASIC0.39□□□□□ -2.35
Ccdc38Q8CDN8 Gm24728-201ENSMUST00000158226 125 ntBASIC0.39□□□□□ -2.35
Ccdc38Q8CDN8 Gm16546-201ENSMUST00000159442 355 ntBASIC0.39□□□□□ -2.35
Ccdc38Q8CDN8 Gm24488-201ENSMUST00000179934 127 ntBASIC0.39□□□□□ -2.35
Ccdc38Q8CDN8 Gm25701-201ENSMUST00000179988 127 ntBASIC0.39□□□□□ -2.35
Ccdc38Q8CDN8 Gm26431-201ENSMUST00000180199 127 ntBASIC0.39□□□□□ -2.35
Ccdc38Q8CDN8 Mir669l-201ENSMUST00000103771 98 ntBASIC0.38□□□□□ -2.35
Ccdc38Q8CDN8 Gm25390-201ENSMUST00000157341 103 ntBASIC0.38□□□□□ -2.35
Ccdc38Q8CDN8 Gm24963-201ENSMUST00000157916 144 ntBASIC0.38□□□□□ -2.35
Ccdc38Q8CDN8 Gm25364-201ENSMUST00000158851 107 ntBASIC0.38□□□□□ -2.35
Ccdc38Q8CDN8 Mir100-201ENSMUST00000175270 80 ntBASIC0.38□□□□□ -2.35
Ccdc38Q8CDN8 Mir219b-201ENSMUST00000198317 65 ntBASIC0.38□□□□□ -2.35
Ccdc38Q8CDN8 Gm44490-201ENSMUST00000198566 127 ntBASIC0.38□□□□□ -2.35
Ccdc38Q8CDN8 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
Ccdc38Q8CDN8 AC122320.1-201ENSMUST00000227233 105 ntBASIC0.38□□□□□ -2.35
Ccdc38Q8CDN8 Gm25814-201ENSMUST00000082754 107 ntBASIC0.38□□□□□ -2.35
Ccdc38Q8CDN8 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.37□□□□□ -2.35
Ccdc38Q8CDN8 Gm24276-201ENSMUST00000102181 110 ntBASIC0.37□□□□□ -2.35
Ccdc38Q8CDN8 Gm23126-201ENSMUST00000104260 134 ntBASIC0.37□□□□□ -2.35
Ccdc38Q8CDN8 Gm23989-201ENSMUST00000117030 66 ntBASIC0.37□□□□□ -2.35
Ccdc38Q8CDN8 Gm24476-201ENSMUST00000157437 131 ntBASIC0.37□□□□□ -2.35
Ccdc38Q8CDN8 Gm22983-201ENSMUST00000158308 104 ntBASIC0.37□□□□□ -2.35
Ccdc38Q8CDN8 Gm44828-201ENSMUST00000203745 106 ntBASIC0.37□□□□□ -2.35
Ccdc38Q8CDN8 Snord82-201ENSMUST00000082889 70 ntBASIC0.37□□□□□ -2.35
Ccdc38Q8CDN8 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
Ccdc38Q8CDN8 Gm22850-201ENSMUST00000157714 82 ntBASIC0.36□□□□□ -2.35
Ccdc38Q8CDN8 Gm22332-201ENSMUST00000158072 126 ntBASIC0.36□□□□□ -2.35
Ccdc38Q8CDN8 Gm16550-201ENSMUST00000162550 126 ntBASIC0.36□□□□□ -2.35
Ccdc38Q8CDN8 Gm24030-201ENSMUST00000083931 164 ntBASIC0.36□□□□□ -2.35
Ccdc38Q8CDN8 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.35□□□□□ -2.35
Ccdc38Q8CDN8 Gm26420-201ENSMUST00000104273 103 ntBASIC0.35□□□□□ -2.35
Ccdc38Q8CDN8 Gm22079-201ENSMUST00000157592 106 ntBASIC0.35□□□□□ -2.35
Ccdc38Q8CDN8 Gm25223-201ENSMUST00000158200 110 ntBASIC0.35□□□□□ -2.35
Ccdc38Q8CDN8 Gm23969-201ENSMUST00000083324 74 ntBASIC0.35□□□□□ -2.35
Ccdc38Q8CDN8 Gm26303-201ENSMUST00000116845 119 ntBASIC0.34□□□□□ -2.36
Ccdc38Q8CDN8 Gm27579-201ENSMUST00000158113 63 ntBASIC0.34□□□□□ -2.36
Ccdc38Q8CDN8 Gm23545-201ENSMUST00000158205 104 ntBASIC0.34□□□□□ -2.36
Ccdc38Q8CDN8 Gm22431-201ENSMUST00000158545 107 ntBASIC0.34□□□□□ -2.36
Ccdc38Q8CDN8 Gm25718-201ENSMUST00000158632 118 ntBASIC0.34□□□□□ -2.36
Ccdc38Q8CDN8 Gm44457-201ENSMUST00000198109 76 ntBASIC0.34□□□□□ -2.36
Ccdc38Q8CDN8 Mir186-201ENSMUST00000083497 71 ntBASIC0.34□□□□□ -2.36
Ccdc38Q8CDN8 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
Ccdc38Q8CDN8 Gm26152-201ENSMUST00000157427 101 ntBASIC0.33□□□□□ -2.36
Ccdc38Q8CDN8 Gm25300-201ENSMUST00000175284 84 ntBASIC0.33□□□□□ -2.36
Ccdc38Q8CDN8 Gm26116-201ENSMUST00000175600 77 ntBASIC0.33□□□□□ -2.36
Ccdc38Q8CDN8 Gm27402-201ENSMUST00000183890 120 ntBASIC0.33□□□□□ -2.36
Ccdc38Q8CDN8 Gm44455-201ENSMUST00000200061 82 ntBASIC0.33□□□□□ -2.36
Ccdc38Q8CDN8 Gm22744-201ENSMUST00000083444 65 ntBASIC0.33□□□□□ -2.36
Ccdc38Q8CDN8 Gm14039-201ENSMUST00000118705 101 ntBASIC0.32□□□□□ -2.36
Ccdc38Q8CDN8 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC0.32□□□□□ -2.36
Ccdc38Q8CDN8 Gm25769-201ENSMUST00000158569 127 ntBASIC0.32□□□□□ -2.36
Ccdc38Q8CDN8 Gm26360-201ENSMUST00000158872 103 ntBASIC0.32□□□□□ -2.36
Ccdc38Q8CDN8 Gm25749-201ENSMUST00000175485 111 ntBASIC0.32□□□□□ -2.36
Ccdc38Q8CDN8 Mir6369-201ENSMUST00000183772 106 ntBASIC0.32□□□□□ -2.36
Ccdc38Q8CDN8 Mir7079-201ENSMUST00000184697 69 ntBASIC0.32□□□□□ -2.36
Ccdc38Q8CDN8 Mir6928-201ENSMUST00000185166 70 ntBASIC0.32□□□□□ -2.36
Ccdc38Q8CDN8 Gm28767-201ENSMUST00000188601 114 ntBASIC0.32□□□□□ -2.36
Ccdc38Q8CDN8 Mir30f-201ENSMUST00000196073 92 ntBASIC0.32□□□□□ -2.36
Ccdc38Q8CDN8 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.32□□□□□ -2.36
Ccdc38Q8CDN8 Gm23301-201ENSMUST00000082713 65 ntBASIC0.32□□□□□ -2.36
Ccdc38Q8CDN8 Mir411-201ENSMUST00000083543 82 ntBASIC0.32□□□□□ -2.36
Ccdc38Q8CDN8 Gm23772-201ENSMUST00000104433 102 ntBASIC0.31□□□□□ -2.36
Ccdc38Q8CDN8 Gm14838-201ENSMUST00000118913 248 ntBASIC0.31□□□□□ -2.36
Ccdc38Q8CDN8 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
Ccdc38Q8CDN8 Gm27475-201ENSMUST00000183420 61 ntBASIC0.31□□□□□ -2.36
Ccdc38Q8CDN8 Mir7065-201ENSMUST00000185110 61 ntBASIC0.31□□□□□ -2.36
Ccdc38Q8CDN8 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC0.31□□□□□ -2.36
Ccdc38Q8CDN8 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.31□□□□□ -2.36
Ccdc38Q8CDN8 Mir1899-201ENSMUST00000122798 96 ntBASIC0.3□□□□□ -2.36
Ccdc38Q8CDN8 Gm15654-201ENSMUST00000152660 300 ntBASIC0.3□□□□□ -2.36
Ccdc38Q8CDN8 Gm24729-201ENSMUST00000158225 137 ntBASIC0.3□□□□□ -2.36
Ccdc38Q8CDN8 Gm22239-201ENSMUST00000175220 103 ntBASIC0.3□□□□□ -2.36
Ccdc38Q8CDN8 Mir7010-201ENSMUST00000183464 63 ntBASIC0.3□□□□□ -2.36
Ccdc38Q8CDN8 Mir7229-201ENSMUST00000197062 53 ntBASIC0.3□□□□□ -2.36
Ccdc38Q8CDN8 Gm44409-201ENSMUST00000198810 166 ntBASIC0.3□□□□□ -2.36
Ccdc38Q8CDN8 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.3□□□□□ -2.36
Ccdc38Q8CDN8 Gm23347-201ENSMUST00000083823 82 ntBASIC0.3□□□□□ -2.36
Ccdc38Q8CDN8 Gm25787-201ENSMUST00000104709 92 ntBASIC0.29□□□□□ -2.36
Ccdc38Q8CDN8 Gm24833-201ENSMUST00000116775 120 ntBASIC0.29□□□□□ -2.36
Ccdc38Q8CDN8 Gm23783-201ENSMUST00000157941 102 ntBASIC0.29□□□□□ -2.36
Ccdc38Q8CDN8 Gm37116-201ENSMUST00000195161 147 ntBASIC0.29□□□□□ -2.36
Ccdc38Q8CDN8 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.29□□□□□ -2.36
Ccdc38Q8CDN8 Gm22612-201ENSMUST00000158293 101 ntBASIC0.28□□□□□ -2.36
Ccdc38Q8CDN8 Gm37586-201ENSMUST00000193654 204 ntBASIC0.28□□□□□ -2.36
Ccdc38Q8CDN8 Mir721-201ENSMUST00000200230 88 ntBASIC0.28□□□□□ -2.36
Ccdc38Q8CDN8 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Ccdc38Q8CDN8 Gm22148-201ENSMUST00000104445 107 ntBASIC0.27□□□□□ -2.37
Ccdc38Q8CDN8 Gm25633-201ENSMUST00000178565 107 ntBASIC0.27□□□□□ -2.37
Ccdc38Q8CDN8 Mir6342-201ENSMUST00000183870 125 ntBASIC0.27□□□□□ -2.37
Ccdc38Q8CDN8 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.27□□□□□ -2.37
Ccdc38Q8CDN8 Gm44807-201ENSMUST00000206115 154 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 173.4 ms