Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.5□□□□□ -2.01
Usp40Q8BWR4 Mir1950-201ENSMUST00000158526 74 ntBASIC2.5□□□□□ -2.01
Usp40Q8BWR4 Gm45544-201ENSMUST00000211130 88 ntBASIC2.5□□□□□ -2.01
Usp40Q8BWR4 Gm26441-201ENSMUST00000082590 104 ntBASIC2.5□□□□□ -2.01
Usp40Q8BWR4 Gm24536-201ENSMUST00000083144 107 ntBASIC2.5□□□□□ -2.01
Usp40Q8BWR4 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.5□□□□□ -2.01
Usp40Q8BWR4 Gm22761-201ENSMUST00000102278 96 ntBASIC2.49□□□□□ -2.01
Usp40Q8BWR4 Gm22151-201ENSMUST00000116963 58 ntBASIC2.49□□□□□ -2.01
Usp40Q8BWR4 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC2.49□□□□□ -2.01
Usp40Q8BWR4 Mir6237-201ENSMUST00000183808 91 ntBASIC2.49□□□□□ -2.01
Usp40Q8BWR4 Gm25697-201ENSMUST00000082902 98 ntBASIC2.49□□□□□ -2.01
Usp40Q8BWR4 Mir1a-1-201ENSMUST00000093635 77 ntBASIC2.49□□□□□ -2.01
Usp40Q8BWR4 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
Usp40Q8BWR4 Gm22556-201ENSMUST00000157803 100 ntBASIC2.48□□□□□ -2.01
Usp40Q8BWR4 Gm25329-201ENSMUST00000158041 126 ntBASIC2.48□□□□□ -2.01
Usp40Q8BWR4 Gm22535-201ENSMUST00000158174 119 ntBASIC2.48□□□□□ -2.01
Usp40Q8BWR4 Gm27544-201ENSMUST00000185069 155 ntBASIC2.48□□□□□ -2.01
Usp40Q8BWR4 Gm37778-201ENSMUST00000191732 190 ntBASIC2.48□□□□□ -2.01
Usp40Q8BWR4 Mir7021-201ENSMUST00000197026 63 ntBASIC2.48□□□□□ -2.01
Usp40Q8BWR4 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC2.48□□□□□ -2.01
Usp40Q8BWR4 Gm44555-201ENSMUST00000209008 148 ntBASIC2.48□□□□□ -2.01
Usp40Q8BWR4 Gm20108-201ENSMUST00000219977 153 ntBASIC2.48□□□□□ -2.01
Usp40Q8BWR4 Gm25357-201ENSMUST00000082745 72 ntBASIC2.48□□□□□ -2.01
Usp40Q8BWR4 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.48□□□□□ -2.01
Usp40Q8BWR4 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.48□□□□□ -2.01
Usp40Q8BWR4 Gm42795-201ENSMUST00000198847 76 ntBASIC2.47□□□□□ -2.01
Usp40Q8BWR4 Mir3087-201ENSMUST00000199405 56 ntBASIC2.47□□□□□ -2.01
Usp40Q8BWR4 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.47□□□□□ -2.01
Usp40Q8BWR4 mt-Tl2-201ENSMUST00000082417 71 ntBASIC2.47□□□□□ -2.01
Usp40Q8BWR4 Gm25855-201ENSMUST00000082787 72 ntBASIC2.47□□□□□ -2.01
Usp40Q8BWR4 Gm24527-201ENSMUST00000082920 107 ntBASIC2.47□□□□□ -2.01
Usp40Q8BWR4 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Usp40Q8BWR4 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Usp40Q8BWR4 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Usp40Q8BWR4 Gm25279-201ENSMUST00000122608 133 ntBASIC2.46□□□□□ -2.02
Usp40Q8BWR4 Mir21c-201ENSMUST00000184910 78 ntBASIC2.46□□□□□ -2.02
Usp40Q8BWR4 Mir6376-201ENSMUST00000185149 131 ntBASIC2.46□□□□□ -2.02
Usp40Q8BWR4 Gm3702-201ENSMUST00000211754 346 ntBASIC2.46□□□□□ -2.02
Usp40Q8BWR4 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC2.46□□□□□ -2.02
Usp40Q8BWR4 AC153950.1-201ENSMUST00000219916 3238 ntBASIC2.45□□□□□ -2.02
Usp40Q8BWR4 Mir802-201ENSMUST00000103258 97 ntBASIC2.45□□□□□ -2.02
Usp40Q8BWR4 Gm22089-201ENSMUST00000158336 102 ntBASIC2.45□□□□□ -2.02
Usp40Q8BWR4 Gm23761-201ENSMUST00000158347 104 ntBASIC2.45□□□□□ -2.02
Usp40Q8BWR4 AC117232.1-201ENSMUST00000197964 119 ntBASIC2.45□□□□□ -2.02
Usp40Q8BWR4 Snord118-201ENSMUST00000082965 135 ntBASIC2.45□□□□□ -2.02
Usp40Q8BWR4 Gm25337-201ENSMUST00000083723 104 ntBASIC2.45□□□□□ -2.02
Usp40Q8BWR4 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Usp40Q8BWR4 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
Usp40Q8BWR4 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Usp40Q8BWR4 Gm24183-201ENSMUST00000122572 93 ntBASIC2.44□□□□□ -2.02
Usp40Q8BWR4 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Usp40Q8BWR4 Gm23983-201ENSMUST00000157142 114 ntBASIC2.44□□□□□ -2.02
Usp40Q8BWR4 Gm23826-201ENSMUST00000157394 119 ntBASIC2.44□□□□□ -2.02
Usp40Q8BWR4 Gm22731-201ENSMUST00000158086 94 ntBASIC2.44□□□□□ -2.02
Usp40Q8BWR4 Gm25371-201ENSMUST00000158162 101 ntBASIC2.44□□□□□ -2.02
Usp40Q8BWR4 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Usp40Q8BWR4 Mir7215-201ENSMUST00000200383 51 ntBASIC2.44□□□□□ -2.02
Usp40Q8BWR4 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.44□□□□□ -2.02
Usp40Q8BWR4 Gm22458-201ENSMUST00000082576 107 ntBASIC2.44□□□□□ -2.02
Usp40Q8BWR4 Gm25696-201ENSMUST00000082900 105 ntBASIC2.44□□□□□ -2.02
Usp40Q8BWR4 Mir30c-2-201ENSMUST00000083633 84 ntBASIC2.44□□□□□ -2.02
Usp40Q8BWR4 Gm25832-201ENSMUST00000104140 130 ntBASIC2.43□□□□□ -2.02
Usp40Q8BWR4 Gm22522-201ENSMUST00000158271 151 ntBASIC2.43□□□□□ -2.02
Usp40Q8BWR4 Gm5900-201ENSMUST00000179862 375 ntBASIC2.43□□□□□ -2.02
Usp40Q8BWR4 Trbv25-201ENSMUST00000194700 273 ntBASIC2.43□□□□□ -2.02
Usp40Q8BWR4 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.43□□□□□ -2.02
Usp40Q8BWR4 Mir301b-201ENSMUST00000102333 97 ntBASIC2.42□□□□□ -2.02
Usp40Q8BWR4 Mir293-201ENSMUST00000104841 80 ntBASIC2.42□□□□□ -2.02
Usp40Q8BWR4 Gm24238-201ENSMUST00000157792 98 ntBASIC2.42□□□□□ -2.02
Usp40Q8BWR4 Gm22554-201ENSMUST00000157798 147 ntBASIC2.42□□□□□ -2.02
Usp40Q8BWR4 Gm23033-201ENSMUST00000157996 134 ntBASIC2.42□□□□□ -2.02
Usp40Q8BWR4 Gm25229-201ENSMUST00000178587 79 ntBASIC2.42□□□□□ -2.02
Usp40Q8BWR4 Gm23249-201ENSMUST00000083369 161 ntBASIC2.42□□□□□ -2.02
Usp40Q8BWR4 Gm24064-201ENSMUST00000157486 106 ntBASIC2.41□□□□□ -2.02
Usp40Q8BWR4 Gm24076-201ENSMUST00000158179 94 ntBASIC2.41□□□□□ -2.02
Usp40Q8BWR4 Gm25636-201ENSMUST00000082666 133 ntBASIC2.41□□□□□ -2.02
Usp40Q8BWR4 Snora20-201ENSMUST00000082703 128 ntBASIC2.41□□□□□ -2.02
Usp40Q8BWR4 Gm24038-201ENSMUST00000082872 159 ntBASIC2.41□□□□□ -2.02
Usp40Q8BWR4 Snord104-201ENSMUST00000083192 70 ntBASIC2.41□□□□□ -2.02
Usp40Q8BWR4 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.4□□□□□ -2.02
Usp40Q8BWR4 Gm22677-201ENSMUST00000116977 108 ntBASIC2.4□□□□□ -2.03
Usp40Q8BWR4 Gm11333-201ENSMUST00000119479 148 ntBASIC2.4□□□□□ -2.03
Usp40Q8BWR4 Gm26369-201ENSMUST00000157825 100 ntBASIC2.4□□□□□ -2.03
Usp40Q8BWR4 Gm24000-201ENSMUST00000158063 89 ntBASIC2.4□□□□□ -2.03
Usp40Q8BWR4 Mir6950-201ENSMUST00000184438 73 ntBASIC2.4□□□□□ -2.03
Usp40Q8BWR4 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.4□□□□□ -2.03
Usp40Q8BWR4 Mir148b-201ENSMUST00000083626 97 ntBASIC2.4□□□□□ -2.03
Usp40Q8BWR4 Mir490-201ENSMUST00000093567 84 ntBASIC2.4□□□□□ -2.03
Usp40Q8BWR4 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
Usp40Q8BWR4 Gm22338-201ENSMUST00000157715 129 ntBASIC2.39□□□□□ -2.03
Usp40Q8BWR4 Gm23181-201ENSMUST00000158685 110 ntBASIC2.39□□□□□ -2.03
Usp40Q8BWR4 Gm25740-201ENSMUST00000180247 107 ntBASIC2.39□□□□□ -2.03
Usp40Q8BWR4 Gm27987-201ENSMUST00000184023 93 ntBASIC2.39□□□□□ -2.03
Usp40Q8BWR4 Gm27975-201ENSMUST00000184400 101 ntBASIC2.39□□□□□ -2.03
Usp40Q8BWR4 Gm18433-201ENSMUST00000192747 197 ntBASIC2.39□□□□□ -2.03
Usp40Q8BWR4 Gm42807-201ENSMUST00000200141 329 ntBASIC2.39□□□□□ -2.03
Usp40Q8BWR4 AC122335.1-201ENSMUST00000217587 175 ntBASIC2.39□□□□□ -2.03
Usp40Q8BWR4 Mir301-201ENSMUST00000083655 86 ntBASIC2.39□□□□□ -2.03
Usp40Q8BWR4 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.38□□□□□ -2.03
Usp40Q8BWR4 Gm22082-201ENSMUST00000157587 161 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 233.4 ms