Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm23838-201ENSMUST00000158067 162 ntBASIC2.14□□□□□ -2.07
Ubp1Q811S7 Gm26038-201ENSMUST00000158151 106 ntBASIC2.14□□□□□ -2.07
Ubp1Q811S7 Gm22159-201ENSMUST00000158412 130 ntBASIC2.14□□□□□ -2.07
Ubp1Q811S7 Mir7675-201ENSMUST00000184262 58 ntBASIC2.14□□□□□ -2.07
Ubp1Q811S7 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.14□□□□□ -2.07
Ubp1Q811S7 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Ubp1Q811S7 Gm44240-201ENSMUST00000204015 2654 ntBASIC2.13□□□□□ -2.07
Ubp1Q811S7 Mir20b-201ENSMUST00000102087 80 ntBASIC2.13□□□□□ -2.07
Ubp1Q811S7 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.13□□□□□ -2.07
Ubp1Q811S7 Gm16510-201ENSMUST00000153501 249 ntBASIC2.13□□□□□ -2.07
Ubp1Q811S7 Mir7118-201ENSMUST00000197760 61 ntBASIC2.13□□□□□ -2.07
Ubp1Q811S7 Gm26342-201ENSMUST00000104557 129 ntBASIC2.12□□□□□ -2.07
Ubp1Q811S7 Gm23551-201ENSMUST00000116852 121 ntBASIC2.12□□□□□ -2.07
Ubp1Q811S7 Gm13433-201ENSMUST00000121701 240 ntBASIC2.12□□□□□ -2.07
Ubp1Q811S7 Gm24509-201ENSMUST00000157086 101 ntBASIC2.12□□□□□ -2.07
Ubp1Q811S7 Gm25358-201ENSMUST00000157189 101 ntBASIC2.12□□□□□ -2.07
Ubp1Q811S7 Gm23601-201ENSMUST00000157259 131 ntBASIC2.12□□□□□ -2.07
Ubp1Q811S7 Gm24947-201ENSMUST00000158334 110 ntBASIC2.12□□□□□ -2.07
Ubp1Q811S7 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.12□□□□□ -2.07
Ubp1Q811S7 Mir30f-201ENSMUST00000196073 92 ntBASIC2.12□□□□□ -2.07
Ubp1Q811S7 Gm25068-201ENSMUST00000103895 110 ntBASIC2.11□□□□□ -2.07
Ubp1Q811S7 Snord78-201ENSMUST00000104032 66 ntBASIC2.11□□□□□ -2.07
Ubp1Q811S7 Gm23384-201ENSMUST00000158593 103 ntBASIC2.11□□□□□ -2.07
Ubp1Q811S7 Gm22664-201ENSMUST00000158719 105 ntBASIC2.11□□□□□ -2.07
Ubp1Q811S7 Gm16307-201ENSMUST00000161269 210 ntBASIC2.11□□□□□ -2.07
Ubp1Q811S7 Mir5118-201ENSMUST00000175551 67 ntBASIC2.11□□□□□ -2.07
Ubp1Q811S7 Mir21c-201ENSMUST00000184910 78 ntBASIC2.11□□□□□ -2.07
Ubp1Q811S7 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Ubp1Q811S7 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Ubp1Q811S7 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Ubp1Q811S7 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Ubp1Q811S7 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Ubp1Q811S7 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Ubp1Q811S7 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Ubp1Q811S7 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Ubp1Q811S7 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Ubp1Q811S7 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Ubp1Q811S7 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC2.11□□□□□ -2.07
Ubp1Q811S7 mt-Tv-201ENSMUST00000082389 69 ntBASIC2.11□□□□□ -2.07
Ubp1Q811S7 Gm24151-201ENSMUST00000082758 141 ntBASIC2.11□□□□□ -2.07
Ubp1Q811S7 Mir344e-201ENSMUST00000104677 66 ntBASIC2.1□□□□□ -2.07
Ubp1Q811S7 Gm22666-201ENSMUST00000158717 164 ntBASIC2.1□□□□□ -2.07
Ubp1Q811S7 Gm22093-201ENSMUST00000158980 111 ntBASIC2.1□□□□□ -2.07
Ubp1Q811S7 Gm26398-201ENSMUST00000179015 127 ntBASIC2.1□□□□□ -2.07
Ubp1Q811S7 AC160962.3-201ENSMUST00000225914 112 ntBASIC2.1□□□□□ -2.07
Ubp1Q811S7 Gm23106-201ENSMUST00000157554 101 ntBASIC2.09□□□□□ -2.07
Ubp1Q811S7 Gm27365-201ENSMUST00000184041 177 ntBASIC2.09□□□□□ -2.07
Ubp1Q811S7 Gm44384-201ENSMUST00000200208 114 ntBASIC2.09□□□□□ -2.07
Ubp1Q811S7 Gm25650-201ENSMUST00000083784 162 ntBASIC2.09□□□□□ -2.07
Ubp1Q811S7 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Ubp1Q811S7 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Ubp1Q811S7 Gm25680-201ENSMUST00000116917 126 ntBASIC2.08□□□□□ -2.08
Ubp1Q811S7 Gm22635-201ENSMUST00000116962 126 ntBASIC2.08□□□□□ -2.08
Ubp1Q811S7 Gm15536-201ENSMUST00000121411 114 ntBASIC2.08□□□□□ -2.08
Ubp1Q811S7 n-R5s39-201ENSMUST00000122613 108 ntBASIC2.08□□□□□ -2.08
Ubp1Q811S7 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC2.08□□□□□ -2.08
Ubp1Q811S7 Gm25636-201ENSMUST00000082666 133 ntBASIC2.08□□□□□ -2.08
Ubp1Q811S7 Gm23244-201ENSMUST00000083375 92 ntBASIC2.08□□□□□ -2.08
Ubp1Q811S7 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC2.07□□□□□ -2.08
Ubp1Q811S7 Gm14923-201ENSMUST00000118270 155 ntBASIC2.06□□□□□ -2.08
Ubp1Q811S7 Gm24650-201ENSMUST00000157105 103 ntBASIC2.06□□□□□ -2.08
Ubp1Q811S7 Gm22319-201ENSMUST00000157147 122 ntBASIC2.06□□□□□ -2.08
Ubp1Q811S7 Gm22082-201ENSMUST00000157587 161 ntBASIC2.06□□□□□ -2.08
Ubp1Q811S7 Gm24237-201ENSMUST00000157790 132 ntBASIC2.06□□□□□ -2.08
Ubp1Q811S7 Gm22963-201ENSMUST00000157960 91 ntBASIC2.06□□□□□ -2.08
Ubp1Q811S7 Gm27511-201ENSMUST00000183502 127 ntBASIC2.06□□□□□ -2.08
Ubp1Q811S7 AC159093.2-201ENSMUST00000227881 297 ntBASIC2.05□□□□□ -2.08
Ubp1Q811S7 Gm12941-201ENSMUST00000117934 220 ntBASIC2.04□□□□□ -2.08
Ubp1Q811S7 Mir378a-201ENSMUST00000198300 66 ntBASIC2.04□□□□□ -2.08
Ubp1Q811S7 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Ubp1Q811S7 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Ubp1Q811S7 Gm25094-201ENSMUST00000103992 131 ntBASIC2.03□□□□□ -2.08
Ubp1Q811S7 Gm14039-201ENSMUST00000118705 101 ntBASIC2.03□□□□□ -2.08
Ubp1Q811S7 Gm22227-201ENSMUST00000157356 259 ntBASIC2.03□□□□□ -2.08
Ubp1Q811S7 Gm22803-201ENSMUST00000158049 283 ntBASIC2.03□□□□□ -2.08
Ubp1Q811S7 Gm25820-202ENSMUST00000197479 128 ntBASIC2.03□□□□□ -2.08
Ubp1Q811S7 Gm24524-201ENSMUST00000082925 170 ntBASIC2.03□□□□□ -2.08
Ubp1Q811S7 Mir222-201ENSMUST00000083537 79 ntBASIC2.03□□□□□ -2.08
Ubp1Q811S7 Gm24494-201ENSMUST00000083804 81 ntBASIC2.03□□□□□ -2.08
Ubp1Q811S7 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
Ubp1Q811S7 Mir450b-201ENSMUST00000102095 82 ntBASIC2.02□□□□□ -2.09
Ubp1Q811S7 Gm25663-201ENSMUST00000157698 135 ntBASIC2.02□□□□□ -2.09
Ubp1Q811S7 Gm22164-201ENSMUST00000158413 106 ntBASIC2.02□□□□□ -2.09
Ubp1Q811S7 Gm25958-201ENSMUST00000175114 71 ntBASIC2.02□□□□□ -2.09
Ubp1Q811S7 Gm22264-201ENSMUST00000178200 107 ntBASIC2.02□□□□□ -2.09
Ubp1Q811S7 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC2.02□□□□□ -2.09
Ubp1Q811S7 Snora69-201ENSMUST00000083708 131 ntBASIC2.02□□□□□ -2.09
Ubp1Q811S7 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Ubp1Q811S7 Mir802-201ENSMUST00000103258 97 ntBASIC2.01□□□□□ -2.09
Ubp1Q811S7 Gm26077-201ENSMUST00000104064 123 ntBASIC2.01□□□□□ -2.09
Ubp1Q811S7 Gm22785-201ENSMUST00000104087 132 ntBASIC2.01□□□□□ -2.09
Ubp1Q811S7 U6.1-201ENSMUST00000157443 101 ntBASIC2.01□□□□□ -2.09
Ubp1Q811S7 Gm22845-201ENSMUST00000157712 104 ntBASIC2.01□□□□□ -2.09
Ubp1Q811S7 Gm25976-201ENSMUST00000158695 130 ntBASIC2.01□□□□□ -2.09
Ubp1Q811S7 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.01□□□□□ -2.09
Ubp1Q811S7 Gm28767-201ENSMUST00000188601 114 ntBASIC2.01□□□□□ -2.09
Ubp1Q811S7 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Ubp1Q811S7 Gm22887-201ENSMUST00000178586 107 ntBASIC2□□□□□ -2.09
Ubp1Q811S7 Mir6369-201ENSMUST00000183772 106 ntBASIC2□□□□□ -2.09
Ubp1Q811S7 CT485608.2-201ENSMUST00000227210 291 ntBASIC2□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 151.9 ms