Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.96□□□□□ -2.56
Nup98Q6PFD9 Snora26-201ENSMUST00000175614 121 ntBASIC-0.96□□□□□ -2.56
Nup98Q6PFD9 Gm23571-201ENSMUST00000180073 127 ntBASIC-0.96□□□□□ -2.56
Nup98Q6PFD9 AC125311.1-201ENSMUST00000226950 220 ntBASIC-0.96□□□□□ -2.56
Nup98Q6PFD9 Gm16550-201ENSMUST00000162550 126 ntBASIC-0.97□□□□□ -2.56
Nup98Q6PFD9 Gm9227-201ENSMUST00000194733 566 ntBASIC-0.97□□□□□ -2.56
Nup98Q6PFD9 Gm44419-201ENSMUST00000203338 229 ntBASIC-0.97□□□□□ -2.56
Nup98Q6PFD9 Mir582-201ENSMUST00000103758 81 ntBASIC-0.98□□□□□ -2.57
Nup98Q6PFD9 Gm25464-201ENSMUST00000175481 107 ntBASIC-0.98□□□□□ -2.57
Nup98Q6PFD9 Gm26233-201ENSMUST00000175530 70 ntBASIC-0.98□□□□□ -2.57
Nup98Q6PFD9 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC-0.98□□□□□ -2.57
Nup98Q6PFD9 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.98□□□□□ -2.57
Nup98Q6PFD9 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.98□□□□□ -2.57
Nup98Q6PFD9 Gm24276-201ENSMUST00000102181 110 ntBASIC-0.99□□□□□ -2.57
Nup98Q6PFD9 Gm14906-201ENSMUST00000119265 390 ntBASIC-0.99□□□□□ -2.57
Nup98Q6PFD9 Gm12686-201ENSMUST00000120546 397 ntBASIC-0.99□□□□□ -2.57
Nup98Q6PFD9 Gm22598-201ENSMUST00000157600 127 ntBASIC-0.99□□□□□ -2.57
Nup98Q6PFD9 Gm25600-201ENSMUST00000158357 106 ntBASIC-0.99□□□□□ -2.57
Nup98Q6PFD9 Gm24129-201ENSMUST00000158537 97 ntBASIC-0.99□□□□□ -2.57
Nup98Q6PFD9 Gm22166-201ENSMUST00000178419 121 ntBASIC-0.99□□□□□ -2.57
Nup98Q6PFD9 Gm23288-201ENSMUST00000179213 121 ntBASIC-0.99□□□□□ -2.57
Nup98Q6PFD9 AC192333.2-201ENSMUST00000224771 196 ntBASIC-0.99□□□□□ -2.57
Nup98Q6PFD9 Gm24704-201ENSMUST00000093715 107 ntBASIC-0.99□□□□□ -2.57
Nup98Q6PFD9 Mir717-201ENSMUST00000102259 109 ntBASIC-0.99□□□□□ -2.57
Nup98Q6PFD9 Gm26076-201ENSMUST00000104065 105 ntBASIC-0.99□□□□□ -2.57
Nup98Q6PFD9 Gm14766-201ENSMUST00000121689 367 ntBASIC-0.99□□□□□ -2.57
Nup98Q6PFD9 Zfp950-206ENSMUST00000178819 171 ntBASIC-0.99□□□□□ -2.57
Nup98Q6PFD9 Gm13801-201ENSMUST00000120750 160 ntBASIC-1□□□□□ -2.57
Nup98Q6PFD9 Gm25323-201ENSMUST00000122555 103 ntBASIC-1□□□□□ -2.57
Nup98Q6PFD9 Mir30f-201ENSMUST00000196073 92 ntBASIC-1□□□□□ -2.57
Nup98Q6PFD9 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-1□□□□□ -2.57
Nup98Q6PFD9 Gm25078-201ENSMUST00000082530 107 ntBASIC-1□□□□□ -2.57
Nup98Q6PFD9 Gm24037-201ENSMUST00000082871 180 ntBASIC-1□□□□□ -2.57
Nup98Q6PFD9 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-1□□□□□ -2.57
Nup98Q6PFD9 Gm24635-201ENSMUST00000122712 128 ntBASIC-1.01□□□□□ -2.57
Nup98Q6PFD9 Gm25522-201ENSMUST00000158394 105 ntBASIC-1.01□□□□□ -2.57
Nup98Q6PFD9 Gm26007-201ENSMUST00000158798 120 ntBASIC-1.01□□□□□ -2.57
Nup98Q6PFD9 Gm44811-201ENSMUST00000209120 228 ntBASIC-1.01□□□□□ -2.57
Nup98Q6PFD9 Gm23625-201ENSMUST00000082457 100 ntBASIC-1.01□□□□□ -2.57
Nup98Q6PFD9 Gm25507-201ENSMUST00000116981 144 ntBASIC-1.01□□□□□ -2.57
Nup98Q6PFD9 Gm23831-201ENSMUST00000158895 85 ntBASIC-1.01□□□□□ -2.57
Nup98Q6PFD9 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC-1.01□□□□□ -2.57
Nup98Q6PFD9 Gm26131-201ENSMUST00000082725 110 ntBASIC-1.01□□□□□ -2.57
Nup98Q6PFD9 Gm23016-201ENSMUST00000158431 62 ntBASIC-1.02□□□□□ -2.57
Nup98Q6PFD9 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC-1.02□□□□□ -2.57
Nup98Q6PFD9 Gm23660-201ENSMUST00000178362 79 ntBASIC-1.02□□□□□ -2.57
Nup98Q6PFD9 Gm24088-201ENSMUST00000179100 79 ntBASIC-1.02□□□□□ -2.57
Nup98Q6PFD9 Gm37763-201ENSMUST00000193445 120 ntBASIC-1.02□□□□□ -2.57
Nup98Q6PFD9 mt-Tc-201ENSMUST00000082400 66 ntBASIC-1.02□□□□□ -2.57
Nup98Q6PFD9 Scarna9-201ENSMUST00000104318 70 ntBASIC-1.03□□□□□ -2.57
Nup98Q6PFD9 Gm22767-201ENSMUST00000158365 165 ntBASIC-1.03□□□□□ -2.57
Nup98Q6PFD9 Gm22841-201ENSMUST00000158443 62 ntBASIC-1.03□□□□□ -2.57
Nup98Q6PFD9 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-1.03□□□□□ -2.57
Nup98Q6PFD9 Gm23423-201ENSMUST00000082782 106 ntBASIC-1.03□□□□□ -2.57
Nup98Q6PFD9 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC-1.03□□□□□ -2.57
Nup98Q6PFD9 Gm12770-201ENSMUST00000121734 462 ntBASIC-1.03□□□□□ -2.57
Nup98Q6PFD9 Gm26133-201ENSMUST00000157363 100 ntBASIC-1.03□□□□□ -2.57
Nup98Q6PFD9 Mir6369-201ENSMUST00000183772 106 ntBASIC-1.03□□□□□ -2.57
Nup98Q6PFD9 Gm27410-201ENSMUST00000183851 115 ntBASIC-1.03□□□□□ -2.57
Nup98Q6PFD9 AC116589.3-202ENSMUST00000221770 649 ntBASIC-1.03□□□□□ -2.57
Nup98Q6PFD9 AC116589.6-201ENSMUST00000222252 649 ntBASIC-1.03□□□□□ -2.57
Nup98Q6PFD9 Gm26329-201ENSMUST00000093723 110 ntBASIC-1.03□□□□□ -2.57
Nup98Q6PFD9 Gm25317-201ENSMUST00000116824 129 ntBASIC-1.04□□□□□ -2.58
Nup98Q6PFD9 Gm23536-201ENSMUST00000157541 134 ntBASIC-1.04□□□□□ -2.58
Nup98Q6PFD9 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.04□□□□□ -2.58
Nup98Q6PFD9 Gm26291-201ENSMUST00000158889 137 ntBASIC-1.04□□□□□ -2.58
Nup98Q6PFD9 Mir677-202ENSMUST00000197076 78 ntBASIC-1.04□□□□□ -2.58
Nup98Q6PFD9 Gm24149-201ENSMUST00000082757 107 ntBASIC-1.04□□□□□ -2.58
Nup98Q6PFD9 Gm24275-201ENSMUST00000116780 146 ntBASIC-1.05□□□□□ -2.58
Nup98Q6PFD9 Gm26255-201ENSMUST00000122492 103 ntBASIC-1.05□□□□□ -2.58
Nup98Q6PFD9 Gm27944-201ENSMUST00000185155 103 ntBASIC-1.05□□□□□ -2.58
Nup98Q6PFD9 AC132437.1-201ENSMUST00000218308 320 ntBASIC-1.05□□□□□ -2.58
Nup98Q6PFD9 Gm25586-201ENSMUST00000082499 112 ntBASIC-1.05□□□□□ -2.58
Nup98Q6PFD9 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.05□□□□□ -2.58
Nup98Q6PFD9 Gm26202-201ENSMUST00000082910 65 ntBASIC-1.05□□□□□ -2.58
Nup98Q6PFD9 Mir759-201ENSMUST00000103254 98 ntBASIC-1.05□□□□□ -2.58
Nup98Q6PFD9 Gm14919-201ENSMUST00000120839 390 ntBASIC-1.05□□□□□ -2.58
Nup98Q6PFD9 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC-1.05□□□□□ -2.58
Nup98Q6PFD9 Gm23904-201ENSMUST00000157567 124 ntBASIC-1.05□□□□□ -2.58
Nup98Q6PFD9 Gm23072-201ENSMUST00000158243 123 ntBASIC-1.05□□□□□ -2.58
Nup98Q6PFD9 Gm25314-201ENSMUST00000178810 79 ntBASIC-1.05□□□□□ -2.58
Nup98Q6PFD9 Mir6961-201ENSMUST00000183874 67 ntBASIC-1.05□□□□□ -2.58
Nup98Q6PFD9 Gm26495-201ENSMUST00000083152 137 ntBASIC-1.05□□□□□ -2.58
Nup98Q6PFD9 Gm25579-201ENSMUST00000083407 106 ntBASIC-1.05□□□□□ -2.58
Nup98Q6PFD9 Gm25510-201ENSMUST00000116986 123 ntBASIC-1.06□□□□□ -2.58
Nup98Q6PFD9 Gm14301-201ENSMUST00000120181 324 ntBASIC-1.06□□□□□ -2.58
Nup98Q6PFD9 Gm23715-201ENSMUST00000157354 106 ntBASIC-1.06□□□□□ -2.58
Nup98Q6PFD9 Gm37624-201ENSMUST00000193751 219 ntBASIC-1.06□□□□□ -2.58
Nup98Q6PFD9 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.06□□□□□ -2.58
Nup98Q6PFD9 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-1.06□□□□□ -2.58
Nup98Q6PFD9 Snord67-201ENSMUST00000104033 111 ntBASIC-1.07□□□□□ -2.58
Nup98Q6PFD9 Gm28917-201ENSMUST00000187294 237 ntBASIC-1.07□□□□□ -2.58
Nup98Q6PFD9 Gm22169-201ENSMUST00000083229 107 ntBASIC-1.07□□□□□ -2.58
Nup98Q6PFD9 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.08□□□□□ -2.58
Nup98Q6PFD9 Mir7055-201ENSMUST00000197423 59 ntBASIC-1.08□□□□□ -2.58
Nup98Q6PFD9 Gm43381-201ENSMUST00000198553 165 ntBASIC-1.08□□□□□ -2.58
Nup98Q6PFD9 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.08□□□□□ -2.58
Nup98Q6PFD9 Gm25588-201ENSMUST00000082501 140 ntBASIC-1.08□□□□□ -2.58
Nup98Q6PFD9 Gm14001-201ENSMUST00000118847 247 ntBASIC-1.08□□□□□ -2.58
Nup98Q6PFD9 Gm25828-201ENSMUST00000157087 95 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 76,532 protein–RNA pairs in 253.5 ms