Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Gm23299-201ENSMUST00000082708 79 ntBASIC2.19□□□□□ -2.06
Cpsf6Q6NVF9 Gm22677-201ENSMUST00000116977 108 ntBASIC2.18□□□□□ -2.06
Cpsf6Q6NVF9 Gm24475-201ENSMUST00000157435 143 ntBASIC2.18□□□□□ -2.06
Cpsf6Q6NVF9 Gm22089-201ENSMUST00000158336 102 ntBASIC2.18□□□□□ -2.06
Cpsf6Q6NVF9 Gm26213-201ENSMUST00000158582 110 ntBASIC2.18□□□□□ -2.06
Cpsf6Q6NVF9 Gm26290-201ENSMUST00000158891 145 ntBASIC2.18□□□□□ -2.06
Cpsf6Q6NVF9 Gm28900-201ENSMUST00000185232 156 ntBASIC2.18□□□□□ -2.06
Cpsf6Q6NVF9 Mir429-201ENSMUST00000083493 83 ntBASIC2.18□□□□□ -2.06
Cpsf6Q6NVF9 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
Cpsf6Q6NVF9 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Cpsf6Q6NVF9 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Cpsf6Q6NVF9 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Cpsf6Q6NVF9 Gm22151-201ENSMUST00000116963 58 ntBASIC2.17□□□□□ -2.06
Cpsf6Q6NVF9 Gm22522-201ENSMUST00000158271 151 ntBASIC2.17□□□□□ -2.06
Cpsf6Q6NVF9 Gm16561-201ENSMUST00000163001 192 ntBASIC2.17□□□□□ -2.06
Cpsf6Q6NVF9 Gm27975-201ENSMUST00000184400 101 ntBASIC2.17□□□□□ -2.06
Cpsf6Q6NVF9 Mir6388-201ENSMUST00000184417 75 ntBASIC2.17□□□□□ -2.06
Cpsf6Q6NVF9 Mir30f-201ENSMUST00000196073 92 ntBASIC2.17□□□□□ -2.06
Cpsf6Q6NVF9 Mir7118-201ENSMUST00000197760 61 ntBASIC2.17□□□□□ -2.06
Cpsf6Q6NVF9 Mir7232-201ENSMUST00000197929 74 ntBASIC2.17□□□□□ -2.06
Cpsf6Q6NVF9 Mir3069-201ENSMUST00000198802 65 ntBASIC2.17□□□□□ -2.06
Cpsf6Q6NVF9 Gm23889-201ENSMUST00000122689 104 ntBASIC2.16□□□□□ -2.06
Cpsf6Q6NVF9 Gm24384-201ENSMUST00000122693 75 ntBASIC2.16□□□□□ -2.06
Cpsf6Q6NVF9 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Cpsf6Q6NVF9 Gm23763-201ENSMUST00000158345 60 ntBASIC2.16□□□□□ -2.06
Cpsf6Q6NVF9 Gm25044-201ENSMUST00000158603 104 ntBASIC2.16□□□□□ -2.06
Cpsf6Q6NVF9 Gm23375-201ENSMUST00000175407 83 ntBASIC2.16□□□□□ -2.06
Cpsf6Q6NVF9 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.16□□□□□ -2.06
Cpsf6Q6NVF9 Gm25899-201ENSMUST00000082672 141 ntBASIC2.16□□□□□ -2.06
Cpsf6Q6NVF9 Gm25854-201ENSMUST00000082792 72 ntBASIC2.16□□□□□ -2.06
Cpsf6Q6NVF9 Snord104-201ENSMUST00000083192 70 ntBASIC2.16□□□□□ -2.06
Cpsf6Q6NVF9 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.16□□□□□ -2.06
Cpsf6Q6NVF9 Mir221-201ENSMUST00000083488 95 ntBASIC2.16□□□□□ -2.06
Cpsf6Q6NVF9 Gm24988-201ENSMUST00000104460 121 ntBASIC2.15□□□□□ -2.07
Cpsf6Q6NVF9 Gm25542-201ENSMUST00000116889 94 ntBASIC2.15□□□□□ -2.07
Cpsf6Q6NVF9 Gm22083-201ENSMUST00000157586 102 ntBASIC2.15□□□□□ -2.07
Cpsf6Q6NVF9 Mir6419-201ENSMUST00000184784 113 ntBASIC2.15□□□□□ -2.07
Cpsf6Q6NVF9 Gm27369-201ENSMUST00000185182 71 ntBASIC2.15□□□□□ -2.07
Cpsf6Q6NVF9 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.15□□□□□ -2.07
Cpsf6Q6NVF9 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
Cpsf6Q6NVF9 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Cpsf6Q6NVF9 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
Cpsf6Q6NVF9 Gm11333-201ENSMUST00000119479 148 ntBASIC2.14□□□□□ -2.07
Cpsf6Q6NVF9 Gm24900-201ENSMUST00000158128 134 ntBASIC2.14□□□□□ -2.07
Cpsf6Q6NVF9 Gm25011-201ENSMUST00000158398 126 ntBASIC2.14□□□□□ -2.07
Cpsf6Q6NVF9 Gm25241-201ENSMUST00000174909 84 ntBASIC2.14□□□□□ -2.07
Cpsf6Q6NVF9 Gm26217-201ENSMUST00000175212 84 ntBASIC2.14□□□□□ -2.07
Cpsf6Q6NVF9 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Cpsf6Q6NVF9 AC069074.1-201ENSMUST00000220048 381 ntBASIC2.14□□□□□ -2.07
Cpsf6Q6NVF9 Gm25696-201ENSMUST00000082900 105 ntBASIC2.14□□□□□ -2.07
Cpsf6Q6NVF9 Mir410-201ENSMUST00000083563 81 ntBASIC2.14□□□□□ -2.07
Cpsf6Q6NVF9 Gm23344-201ENSMUST00000083818 68 ntBASIC2.14□□□□□ -2.07
Cpsf6Q6NVF9 Gm24064-201ENSMUST00000157486 106 ntBASIC2.13□□□□□ -2.07
Cpsf6Q6NVF9 Gm23033-201ENSMUST00000157996 134 ntBASIC2.13□□□□□ -2.07
Cpsf6Q6NVF9 Gm26214-201ENSMUST00000158581 107 ntBASIC2.13□□□□□ -2.07
Cpsf6Q6NVF9 Gm22500-201ENSMUST00000158982 99 ntBASIC2.13□□□□□ -2.07
Cpsf6Q6NVF9 Gm27987-201ENSMUST00000184023 93 ntBASIC2.13□□□□□ -2.07
Cpsf6Q6NVF9 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.13□□□□□ -2.07
Cpsf6Q6NVF9 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
Cpsf6Q6NVF9 Gm25847-201ENSMUST00000116793 96 ntBASIC2.12□□□□□ -2.07
Cpsf6Q6NVF9 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC2.12□□□□□ -2.07
Cpsf6Q6NVF9 Gm16510-201ENSMUST00000153501 249 ntBASIC2.12□□□□□ -2.07
Cpsf6Q6NVF9 Gm16307-201ENSMUST00000161269 210 ntBASIC2.12□□□□□ -2.07
Cpsf6Q6NVF9 Snora24-201ENSMUST00000174989 130 ntBASIC2.12□□□□□ -2.07
Cpsf6Q6NVF9 Mir3075-201ENSMUST00000175340 85 ntBASIC2.12□□□□□ -2.07
Cpsf6Q6NVF9 Mir6369-201ENSMUST00000183772 106 ntBASIC2.12□□□□□ -2.07
Cpsf6Q6NVF9 Mir6925-201ENSMUST00000197857 70 ntBASIC2.12□□□□□ -2.07
Cpsf6Q6NVF9 Gm26379-202ENSMUST00000200225 132 ntBASIC2.12□□□□□ -2.07
Cpsf6Q6NVF9 Gm25788-201ENSMUST00000082721 131 ntBASIC2.12□□□□□ -2.07
Cpsf6Q6NVF9 Gm22884-201ENSMUST00000083127 140 ntBASIC2.12□□□□□ -2.07
Cpsf6Q6NVF9 Gm24162-201ENSMUST00000093665 102 ntBASIC2.12□□□□□ -2.07
Cpsf6Q6NVF9 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.12□□□□□ -2.07
Cpsf6Q6NVF9 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.11□□□□□ -2.07
Cpsf6Q6NVF9 Gm23203-201ENSMUST00000104374 107 ntBASIC2.11□□□□□ -2.07
Cpsf6Q6NVF9 Gm24274-201ENSMUST00000116787 124 ntBASIC2.11□□□□□ -2.07
Cpsf6Q6NVF9 Gm23996-201ENSMUST00000158062 131 ntBASIC2.11□□□□□ -2.07
Cpsf6Q6NVF9 Gm26398-201ENSMUST00000179015 127 ntBASIC2.11□□□□□ -2.07
Cpsf6Q6NVF9 Gm25354-201ENSMUST00000179110 105 ntBASIC2.11□□□□□ -2.07
Cpsf6Q6NVF9 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Cpsf6Q6NVF9 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Cpsf6Q6NVF9 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Cpsf6Q6NVF9 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Cpsf6Q6NVF9 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Cpsf6Q6NVF9 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Cpsf6Q6NVF9 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Cpsf6Q6NVF9 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Cpsf6Q6NVF9 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Cpsf6Q6NVF9 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Cpsf6Q6NVF9 Mir497-201ENSMUST00000200557 84 ntBASIC2.11□□□□□ -2.07
Cpsf6Q6NVF9 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.11□□□□□ -2.07
Cpsf6Q6NVF9 Gm24523-201ENSMUST00000083965 132 ntBASIC2.11□□□□□ -2.07
Cpsf6Q6NVF9 Mir127-201ENSMUST00000093568 70 ntBASIC2.11□□□□□ -2.07
Cpsf6Q6NVF9 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Cpsf6Q6NVF9 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
Cpsf6Q6NVF9 Gm24183-201ENSMUST00000122572 93 ntBASIC2.1□□□□□ -2.07
Cpsf6Q6NVF9 mt-Tl2-201ENSMUST00000082417 71 ntBASIC2.1□□□□□ -2.07
Cpsf6Q6NVF9 Gm25796-201ENSMUST00000082645 163 ntBASIC2.1□□□□□ -2.07
Cpsf6Q6NVF9 Gm22866-201ENSMUST00000083947 177 ntBASIC2.1□□□□□ -2.07
Cpsf6Q6NVF9 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Cpsf6Q6NVF9 Gm22750-201ENSMUST00000102076 103 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 161.5 ms