Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.18□□□□□ -2.06
Trim28Q62318 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.18□□□□□ -2.06
Trim28Q62318 Mir320-201ENSMUST00000083594 82 ntBASIC2.18□□□□□ -2.06
Trim28Q62318 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Trim28Q62318 Gm22545-201ENSMUST00000104350 132 ntBASIC2.17□□□□□ -2.06
Trim28Q62318 n-R5s73-201ENSMUST00000122508 107 ntBASIC2.17□□□□□ -2.06
Trim28Q62318 Gm25113-201ENSMUST00000157185 143 ntBASIC2.17□□□□□ -2.06
Trim28Q62318 Gm25884-201ENSMUST00000157782 62 ntBASIC2.17□□□□□ -2.06
Trim28Q62318 Gm25658-201ENSMUST00000158472 128 ntBASIC2.17□□□□□ -2.06
Trim28Q62318 Gm28383-201ENSMUST00000187563 139 ntBASIC2.17□□□□□ -2.06
Trim28Q62318 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Trim28Q62318 Gm42960-201ENSMUST00000202160 241 ntBASIC2.17□□□□□ -2.06
Trim28Q62318 Mir301-201ENSMUST00000083655 86 ntBASIC2.17□□□□□ -2.06
Trim28Q62318 Mir151-201ENSMUST00000083678 68 ntBASIC2.17□□□□□ -2.06
Trim28Q62318 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Trim28Q62318 Mir301b-201ENSMUST00000102333 97 ntBASIC2.16□□□□□ -2.06
Trim28Q62318 Gm25610-201ENSMUST00000104016 129 ntBASIC2.16□□□□□ -2.06
Trim28Q62318 Gm24984-201ENSMUST00000104454 133 ntBASIC2.16□□□□□ -2.06
Trim28Q62318 Gm25370-201ENSMUST00000158159 94 ntBASIC2.16□□□□□ -2.06
Trim28Q62318 Gm43977-201ENSMUST00000203970 189 ntBASIC2.16□□□□□ -2.06
Trim28Q62318 Gm43865-201ENSMUST00000204721 127 ntBASIC2.16□□□□□ -2.06
Trim28Q62318 Gm22283-201ENSMUST00000082556 161 ntBASIC2.16□□□□□ -2.06
Trim28Q62318 Gm26150-201ENSMUST00000157426 151 ntBASIC2.15□□□□□ -2.07
Trim28Q62318 Gm22731-201ENSMUST00000158086 94 ntBASIC2.15□□□□□ -2.07
Trim28Q62318 Gm23261-201ENSMUST00000158316 136 ntBASIC2.15□□□□□ -2.07
Trim28Q62318 Gm23349-201ENSMUST00000158432 98 ntBASIC2.15□□□□□ -2.07
Trim28Q62318 Mir1931-201ENSMUST00000158589 119 ntBASIC2.15□□□□□ -2.07
Trim28Q62318 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.15□□□□□ -2.07
Trim28Q62318 Gm25357-201ENSMUST00000082745 72 ntBASIC2.15□□□□□ -2.07
Trim28Q62318 Gm25697-201ENSMUST00000082902 98 ntBASIC2.15□□□□□ -2.07
Trim28Q62318 Gm24524-201ENSMUST00000082925 170 ntBASIC2.15□□□□□ -2.07
Trim28Q62318 Mir107-201ENSMUST00000083660 87 ntBASIC2.15□□□□□ -2.07
Trim28Q62318 Gm24261-201ENSMUST00000083744 104 ntBASIC2.15□□□□□ -2.07
Trim28Q62318 Gm44240-201ENSMUST00000204015 2654 ntBASIC2.14□□□□□ -2.07
Trim28Q62318 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.14□□□□□ -2.07
Trim28Q62318 Gm23983-201ENSMUST00000157142 114 ntBASIC2.14□□□□□ -2.07
Trim28Q62318 Gm23083-201ENSMUST00000157851 116 ntBASIC2.14□□□□□ -2.07
Trim28Q62318 Gm24345-201ENSMUST00000158706 124 ntBASIC2.14□□□□□ -2.07
Trim28Q62318 Gm24174-201ENSMUST00000158933 111 ntBASIC2.14□□□□□ -2.07
Trim28Q62318 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Trim28Q62318 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.13□□□□□ -2.07
Trim28Q62318 Gm11792-201ENSMUST00000120640 168 ntBASIC2.13□□□□□ -2.07
Trim28Q62318 Gm26425-201ENSMUST00000122529 82 ntBASIC2.13□□□□□ -2.07
Trim28Q62318 Gm25112-201ENSMUST00000122680 104 ntBASIC2.13□□□□□ -2.07
Trim28Q62318 Gm24649-201ENSMUST00000157106 134 ntBASIC2.13□□□□□ -2.07
Trim28Q62318 Mir1949-201ENSMUST00000157434 141 ntBASIC2.13□□□□□ -2.07
Trim28Q62318 Gm25371-201ENSMUST00000158162 101 ntBASIC2.13□□□□□ -2.07
Trim28Q62318 Gm20409-201ENSMUST00000173457 130 ntBASIC2.13□□□□□ -2.07
Trim28Q62318 Mir7217-201ENSMUST00000200304 62 ntBASIC2.13□□□□□ -2.07
Trim28Q62318 Gm24536-201ENSMUST00000083144 107 ntBASIC2.13□□□□□ -2.07
Trim28Q62318 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.12□□□□□ -2.07
Trim28Q62318 Gm22067-201ENSMUST00000122790 107 ntBASIC2.12□□□□□ -2.07
Trim28Q62318 Gm23351-201ENSMUST00000158427 125 ntBASIC2.12□□□□□ -2.07
Trim28Q62318 Gm24770-201ENSMUST00000158505 92 ntBASIC2.12□□□□□ -2.07
Trim28Q62318 Gm26073-201ENSMUST00000179906 127 ntBASIC2.12□□□□□ -2.07
Trim28Q62318 Gm25855-201ENSMUST00000082787 72 ntBASIC2.12□□□□□ -2.07
Trim28Q62318 Gm23377-201ENSMUST00000082943 126 ntBASIC2.12□□□□□ -2.07
Trim28Q62318 AC153950.1-201ENSMUST00000219916 3238 ntBASIC2.12□□□□□ -2.07
Trim28Q62318 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Trim28Q62318 Gm14937-201ENSMUST00000119709 208 ntBASIC2.11□□□□□ -2.07
Trim28Q62318 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.11□□□□□ -2.07
Trim28Q62318 Gm22540-201ENSMUST00000158168 117 ntBASIC2.11□□□□□ -2.07
Trim28Q62318 Gm22387-201ENSMUST00000158191 131 ntBASIC2.11□□□□□ -2.07
Trim28Q62318 Gm25994-201ENSMUST00000175392 101 ntBASIC2.11□□□□□ -2.07
Trim28Q62318 Mir34a-201ENSMUST00000083559 102 ntBASIC2.11□□□□□ -2.07
Trim28Q62318 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Trim28Q62318 Gm24946-201ENSMUST00000158332 106 ntBASIC2.1□□□□□ -2.07
Trim28Q62318 Gm22768-201ENSMUST00000158366 153 ntBASIC2.1□□□□□ -2.07
Trim28Q62318 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Trim28Q62318 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.1□□□□□ -2.07
Trim28Q62318 Snord118-201ENSMUST00000082965 135 ntBASIC2.1□□□□□ -2.07
Trim28Q62318 Mir30d-201ENSMUST00000083503 82 ntBASIC2.1□□□□□ -2.07
Trim28Q62318 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
Trim28Q62318 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Trim28Q62318 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Trim28Q62318 Gm14882-201ENSMUST00000117216 218 ntBASIC2.09□□□□□ -2.07
Trim28Q62318 n-R5s39-201ENSMUST00000122613 108 ntBASIC2.09□□□□□ -2.07
Trim28Q62318 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.09□□□□□ -2.07
Trim28Q62318 Gm22963-201ENSMUST00000157960 91 ntBASIC2.09□□□□□ -2.07
Trim28Q62318 Gm23065-201ENSMUST00000158236 130 ntBASIC2.09□□□□□ -2.07
Trim28Q62318 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC2.09□□□□□ -2.07
Trim28Q62318 Mir429-201ENSMUST00000083493 83 ntBASIC2.09□□□□□ -2.07
Trim28Q62318 Mir411-201ENSMUST00000083543 82 ntBASIC2.09□□□□□ -2.07
Trim28Q62318 Mir293-201ENSMUST00000104841 80 ntBASIC2.08□□□□□ -2.08
Trim28Q62318 Gm22338-201ENSMUST00000157715 129 ntBASIC2.08□□□□□ -2.08
Trim28Q62318 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.08□□□□□ -2.08
Trim28Q62318 Traj61-201ENSMUST00000165025 72 ntBASIC2.08□□□□□ -2.08
Trim28Q62318 Gm28794-201ENSMUST00000185276 136 ntBASIC2.08□□□□□ -2.08
Trim28Q62318 Gm42795-201ENSMUST00000198847 76 ntBASIC2.08□□□□□ -2.08
Trim28Q62318 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.08□□□□□ -2.08
Trim28Q62318 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.08□□□□□ -2.08
Trim28Q62318 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Trim28Q62318 Gm26080-201ENSMUST00000104069 131 ntBASIC2.07□□□□□ -2.08
Trim28Q62318 Gm24783-201ENSMUST00000157639 100 ntBASIC2.07□□□□□ -2.08
Trim28Q62318 Gm24333-201ENSMUST00000175101 84 ntBASIC2.07□□□□□ -2.08
Trim28Q62318 Mir6377-201ENSMUST00000183760 114 ntBASIC2.07□□□□□ -2.08
Trim28Q62318 Gm27248-201ENSMUST00000184004 166 ntBASIC2.07□□□□□ -2.08
Trim28Q62318 Gm45544-201ENSMUST00000211130 88 ntBASIC2.07□□□□□ -2.08
Trim28Q62318 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.07□□□□□ -2.08
Trim28Q62318 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 219.3 ms