Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm22640-201ENSMUST00000179035 79 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 Gm25984-201ENSMUST00000179129 79 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 Gm25585-201ENSMUST00000179469 79 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 Gm26374-201ENSMUST00000179737 79 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 Gm24040-201ENSMUST00000179786 79 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 Gm25017-201ENSMUST00000179805 79 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 Gm26073-201ENSMUST00000179906 127 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 Gm23618-201ENSMUST00000179912 79 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 Gm26284-201ENSMUST00000180107 79 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 Gm24570-201ENSMUST00000180314 79 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 Gm24654-201ENSMUST00000180315 79 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 Gm43602-201ENSMUST00000196772 300 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 Gm45544-201ENSMUST00000211130 88 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 Gm22743-201ENSMUST00000083445 133 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 Gm25006-201ENSMUST00000083813 107 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
CtcfQ61164 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.58□□□□□ -2.16
CtcfQ61164 Gm24234-201ENSMUST00000104316 107 ntBASIC1.58□□□□□ -2.16
CtcfQ61164 Gm22545-201ENSMUST00000104350 132 ntBASIC1.58□□□□□ -2.16
CtcfQ61164 Gm23708-201ENSMUST00000104367 123 ntBASIC1.58□□□□□ -2.16
CtcfQ61164 Gm23253-201ENSMUST00000157441 104 ntBASIC1.58□□□□□ -2.16
CtcfQ61164 Gm22387-201ENSMUST00000158191 131 ntBASIC1.58□□□□□ -2.16
CtcfQ61164 Gm24842-201ENSMUST00000158681 54 ntBASIC1.58□□□□□ -2.16
CtcfQ61164 Gm25364-201ENSMUST00000158851 107 ntBASIC1.58□□□□□ -2.16
CtcfQ61164 Gm25855-201ENSMUST00000082787 72 ntBASIC1.58□□□□□ -2.16
CtcfQ61164 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
CtcfQ61164 Gm22796-201ENSMUST00000157234 106 ntBASIC1.57□□□□□ -2.16
CtcfQ61164 Gm24246-201ENSMUST00000157315 132 ntBASIC1.57□□□□□ -2.16
CtcfQ61164 Gm24718-201ENSMUST00000157521 136 ntBASIC1.57□□□□□ -2.16
CtcfQ61164 Gm24902-201ENSMUST00000158126 123 ntBASIC1.57□□□□□ -2.16
CtcfQ61164 Gm25769-201ENSMUST00000158569 127 ntBASIC1.57□□□□□ -2.16
CtcfQ61164 Gm24677-201ENSMUST00000158755 150 ntBASIC1.57□□□□□ -2.16
CtcfQ61164 Gm23197-201ENSMUST00000158809 112 ntBASIC1.57□□□□□ -2.16
CtcfQ61164 Gm22565-201ENSMUST00000175540 69 ntBASIC1.57□□□□□ -2.16
CtcfQ61164 Gm44458-201ENSMUST00000196594 143 ntBASIC1.57□□□□□ -2.16
CtcfQ61164 Gm22509-201ENSMUST00000082775 107 ntBASIC1.57□□□□□ -2.16
CtcfQ61164 Gm26421-201ENSMUST00000104279 132 ntBASIC1.56□□□□□ -2.16
CtcfQ61164 Gm14946-201ENSMUST00000119859 296 ntBASIC1.56□□□□□ -2.16
CtcfQ61164 Gm24915-201ENSMUST00000157288 78 ntBASIC1.56□□□□□ -2.16
CtcfQ61164 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.56□□□□□ -2.16
CtcfQ61164 Gm22079-201ENSMUST00000157592 106 ntBASIC1.56□□□□□ -2.16
CtcfQ61164 Gm22888-201ENSMUST00000158640 77 ntBASIC1.56□□□□□ -2.16
CtcfQ61164 Gm24229-201ENSMUST00000158830 118 ntBASIC1.56□□□□□ -2.16
CtcfQ61164 Gm22862-201ENSMUST00000178593 121 ntBASIC1.56□□□□□ -2.16
CtcfQ61164 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.55□□□□□ -2.16
CtcfQ61164 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
CtcfQ61164 Gm22558-201ENSMUST00000157326 95 ntBASIC1.55□□□□□ -2.16
CtcfQ61164 Gm25831-201ENSMUST00000158924 163 ntBASIC1.55□□□□□ -2.16
CtcfQ61164 Mir6928-201ENSMUST00000185166 70 ntBASIC1.55□□□□□ -2.16
CtcfQ61164 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.55□□□□□ -2.16
CtcfQ61164 Gm44962-201ENSMUST00000206460 279 ntBASIC1.55□□□□□ -2.16
CtcfQ61164 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC1.55□□□□□ -2.16
CtcfQ61164 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
CtcfQ61164 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
CtcfQ61164 Gm22164-201ENSMUST00000158413 106 ntBASIC1.54□□□□□ -2.16
CtcfQ61164 Gm25367-201ENSMUST00000158846 106 ntBASIC1.54□□□□□ -2.16
CtcfQ61164 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC1.54□□□□□ -2.16
CtcfQ61164 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
CtcfQ61164 Gm42844-201ENSMUST00000200355 112 ntBASIC1.54□□□□□ -2.16
CtcfQ61164 Gm25038-201ENSMUST00000082928 130 ntBASIC1.54□□□□□ -2.16
CtcfQ61164 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
CtcfQ61164 Gm26076-201ENSMUST00000104065 105 ntBASIC1.53□□□□□ -2.16
CtcfQ61164 Gm23907-201ENSMUST00000104595 189 ntBASIC1.53□□□□□ -2.16
CtcfQ61164 Gm15289-201ENSMUST00000117793 244 ntBASIC1.53□□□□□ -2.16
CtcfQ61164 Gm24894-201ENSMUST00000122744 118 ntBASIC1.53□□□□□ -2.16
CtcfQ61164 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.53□□□□□ -2.16
CtcfQ61164 Gm24250-201ENSMUST00000157320 135 ntBASIC1.53□□□□□ -2.16
CtcfQ61164 Gm23329-201ENSMUST00000157415 108 ntBASIC1.53□□□□□ -2.16
CtcfQ61164 Snord13-201ENSMUST00000157627 104 ntBASIC1.53□□□□□ -2.16
CtcfQ61164 Gm23122-201ENSMUST00000157645 103 ntBASIC1.53□□□□□ -2.16
CtcfQ61164 Gm24000-201ENSMUST00000158063 89 ntBASIC1.53□□□□□ -2.16
CtcfQ61164 Gm23770-201ENSMUST00000178009 108 ntBASIC1.53□□□□□ -2.16
CtcfQ61164 Gm22832-201ENSMUST00000178022 108 ntBASIC1.53□□□□□ -2.16
CtcfQ61164 Gm23863-201ENSMUST00000178265 108 ntBASIC1.53□□□□□ -2.16
CtcfQ61164 Gm24828-201ENSMUST00000178507 108 ntBASIC1.53□□□□□ -2.16
CtcfQ61164 Gm25646-201ENSMUST00000178527 79 ntBASIC1.53□□□□□ -2.16
CtcfQ61164 Gm23052-201ENSMUST00000178633 108 ntBASIC1.53□□□□□ -2.16
CtcfQ61164 Gm25729-201ENSMUST00000179050 108 ntBASIC1.53□□□□□ -2.16
CtcfQ61164 Gm25359-201ENSMUST00000179315 108 ntBASIC1.53□□□□□ -2.16
CtcfQ61164 Gm22624-201ENSMUST00000179913 108 ntBASIC1.53□□□□□ -2.16
CtcfQ61164 Mir7079-201ENSMUST00000184697 69 ntBASIC1.53□□□□□ -2.16
CtcfQ61164 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.52□□□□□ -2.17
CtcfQ61164 Gm14882-201ENSMUST00000117216 218 ntBASIC1.52□□□□□ -2.17
CtcfQ61164 Gm11856-201ENSMUST00000118712 276 ntBASIC1.52□□□□□ -2.17
CtcfQ61164 Gm22963-201ENSMUST00000157960 91 ntBASIC1.52□□□□□ -2.17
CtcfQ61164 Gm24154-201ENSMUST00000175261 130 ntBASIC1.52□□□□□ -2.17
CtcfQ61164 Gm22070-201ENSMUST00000178475 107 ntBASIC1.52□□□□□ -2.17
CtcfQ61164 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.52□□□□□ -2.17
CtcfQ61164 mt-Tf-201ENSMUST00000082387 68 ntBASIC1.52□□□□□ -2.17
CtcfQ61164 Gm26168-201ENSMUST00000083787 112 ntBASIC1.52□□□□□ -2.17
CtcfQ61164 Mir466-201ENSMUST00000093591 73 ntBASIC1.52□□□□□ -2.17
CtcfQ61164 Gm25091-201ENSMUST00000103997 71 ntBASIC1.51□□□□□ -2.17
CtcfQ61164 Gm26081-201ENSMUST00000104068 132 ntBASIC1.51□□□□□ -2.17
CtcfQ61164 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CtcfQ61164 Gm22332-201ENSMUST00000158072 126 ntBASIC1.51□□□□□ -2.17
CtcfQ61164 Gm23221-201ENSMUST00000158118 93 ntBASIC1.51□□□□□ -2.17
CtcfQ61164 Mir3094-201ENSMUST00000175121 64 ntBASIC1.51□□□□□ -2.17
CtcfQ61164 Mir3061-201ENSMUST00000175129 91 ntBASIC1.51□□□□□ -2.17
CtcfQ61164 Gm27711-201ENSMUST00000183802 118 ntBASIC1.51□□□□□ -2.17
CtcfQ61164 Snora20-201ENSMUST00000082703 128 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 266 ms