Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Gm37313-201ENSMUST00000191673 290 ntBASIC-0.53□□□□□ -2.49
Ptch1Q61115 Gm38050-201ENSMUST00000191904 238 ntBASIC-0.53□□□□□ -2.49
Ptch1Q61115 Gm24030-201ENSMUST00000083931 164 ntBASIC-0.53□□□□□ -2.49
Ptch1Q61115 Mir1899-201ENSMUST00000122798 96 ntBASIC-0.54□□□□□ -2.5
Ptch1Q61115 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.54□□□□□ -2.5
Ptch1Q61115 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.54□□□□□ -2.5
Ptch1Q61115 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.54□□□□□ -2.5
Ptch1Q61115 Gm10548-202ENSMUST00000165672 272 ntBASIC-0.54□□□□□ -2.5
Ptch1Q61115 Gm25328-201ENSMUST00000175013 107 ntBASIC-0.54□□□□□ -2.5
Ptch1Q61115 Mir669k-201ENSMUST00000177742 127 ntBASIC-0.54□□□□□ -2.5
Ptch1Q61115 Gm24488-201ENSMUST00000179934 127 ntBASIC-0.54□□□□□ -2.5
Ptch1Q61115 Gm25673-201ENSMUST00000179957 127 ntBASIC-0.54□□□□□ -2.5
Ptch1Q61115 Gm25701-201ENSMUST00000179988 127 ntBASIC-0.54□□□□□ -2.5
Ptch1Q61115 Gm26431-201ENSMUST00000180199 127 ntBASIC-0.54□□□□□ -2.5
Ptch1Q61115 Mir145b-201ENSMUST00000184434 75 ntBASIC-0.54□□□□□ -2.5
Ptch1Q61115 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC-0.54□□□□□ -2.5
Ptch1Q61115 Rny3-201ENSMUST00000083011 102 ntBASIC-0.54□□□□□ -2.5
Ptch1Q61115 Scarna9-201ENSMUST00000104318 70 ntBASIC-0.55□□□□□ -2.5
Ptch1Q61115 Gm25970-201ENSMUST00000157165 86 ntBASIC-0.55□□□□□ -2.5
Ptch1Q61115 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.55□□□□□ -2.5
Ptch1Q61115 Gm37750-201ENSMUST00000193563 129 ntBASIC-0.55□□□□□ -2.5
Ptch1Q61115 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.55□□□□□ -2.5
Ptch1Q61115 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.55□□□□□ -2.5
Ptch1Q61115 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.55□□□□□ -2.5
Ptch1Q61115 Mir363-201ENSMUST00000093598 75 ntBASIC-0.55□□□□□ -2.5
Ptch1Q61115 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.55□□□□□ -2.5
Ptch1Q61115 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-0.55□□□□□ -2.5
Ptch1Q61115 Gm23881-201ENSMUST00000116872 66 ntBASIC-0.55□□□□□ -2.5
Ptch1Q61115 Gm15030-201ENSMUST00000119804 484 ntBASIC-0.55□□□□□ -2.5
Ptch1Q61115 Gm25060-201ENSMUST00000157374 130 ntBASIC-0.55□□□□□ -2.5
Ptch1Q61115 Gm16550-201ENSMUST00000162550 126 ntBASIC-0.55□□□□□ -2.5
Ptch1Q61115 CT025603.4-201ENSMUST00000225777 413 ntBASIC-0.55□□□□□ -2.5
Ptch1Q61115 Snord60-201ENSMUST00000082834 78 ntBASIC-0.55□□□□□ -2.5
Ptch1Q61115 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.55□□□□□ -2.5
Ptch1Q61115 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.56□□□□□ -2.5
Ptch1Q61115 Gm22966-201ENSMUST00000157957 129 ntBASIC-0.56□□□□□ -2.5
Ptch1Q61115 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.56□□□□□ -2.5
Ptch1Q61115 Gm38109-201ENSMUST00000195386 181 ntBASIC-0.56□□□□□ -2.5
Ptch1Q61115 Gm44468-201ENSMUST00000199516 105 ntBASIC-0.56□□□□□ -2.5
Ptch1Q61115 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC-0.56□□□□□ -2.5
Ptch1Q61115 Snord42a-201ENSMUST00000082606 65 ntBASIC-0.56□□□□□ -2.5
Ptch1Q61115 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.56□□□□□ -2.5
Ptch1Q61115 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.56□□□□□ -2.5
Ptch1Q61115 Gm25828-201ENSMUST00000157087 95 ntBASIC-0.57□□□□□ -2.5
Ptch1Q61115 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.57□□□□□ -2.5
Ptch1Q61115 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.57□□□□□ -2.5
Ptch1Q61115 Gm22118-201ENSMUST00000175593 171 ntBASIC-0.57□□□□□ -2.5
Ptch1Q61115 Gm27997-201ENSMUST00000184942 69 ntBASIC-0.57□□□□□ -2.5
Ptch1Q61115 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.57□□□□□ -2.5
Ptch1Q61115 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.58□□□□□ -2.5
Ptch1Q61115 Gm23655-201ENSMUST00000122627 105 ntBASIC-0.58□□□□□ -2.5
Ptch1Q61115 Gm22085-201ENSMUST00000158344 110 ntBASIC-0.58□□□□□ -2.5
Ptch1Q61115 Gm24501-201ENSMUST00000158452 62 ntBASIC-0.58□□□□□ -2.5
Ptch1Q61115 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.58□□□□□ -2.5
Ptch1Q61115 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.58□□□□□ -2.5
Ptch1Q61115 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-0.58□□□□□ -2.5
Ptch1Q61115 Gm7240-201ENSMUST00000220769 664 ntBASIC-0.58□□□□□ -2.5
Ptch1Q61115 Gm25756-201ENSMUST00000103990 136 ntBASIC-0.59□□□□□ -2.5
Ptch1Q61115 Gm26081-201ENSMUST00000104068 132 ntBASIC-0.59□□□□□ -2.5
Ptch1Q61115 Gm26479-201ENSMUST00000122620 106 ntBASIC-0.59□□□□□ -2.5
Ptch1Q61115 Gm23022-201ENSMUST00000158768 180 ntBASIC-0.59□□□□□ -2.5
Ptch1Q61115 Gm25160-201ENSMUST00000158914 102 ntBASIC-0.59□□□□□ -2.5
Ptch1Q61115 Gm18665-201ENSMUST00000189783 270 ntBASIC-0.59□□□□□ -2.5
Ptch1Q61115 Gm44419-201ENSMUST00000203338 229 ntBASIC-0.59□□□□□ -2.5
Ptch1Q61115 Gm44149-201ENSMUST00000204256 226 ntBASIC-0.59□□□□□ -2.5
Ptch1Q61115 Gm22686-201ENSMUST00000082847 100 ntBASIC-0.59□□□□□ -2.5
Ptch1Q61115 Mir183-201ENSMUST00000083685 70 ntBASIC-0.59□□□□□ -2.5
Ptch1Q61115 Gm23845-201ENSMUST00000083834 152 ntBASIC-0.59□□□□□ -2.5
Ptch1Q61115 Gm25848-201ENSMUST00000116790 144 ntBASIC-0.6□□□□□ -2.51
Ptch1Q61115 Gm22555-201ENSMUST00000157801 62 ntBASIC-0.6□□□□□ -2.51
Ptch1Q61115 Gm24197-201ENSMUST00000175085 109 ntBASIC-0.6□□□□□ -2.51
Ptch1Q61115 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.6□□□□□ -2.51
Ptch1Q61115 Gm25935-201ENSMUST00000178746 107 ntBASIC-0.6□□□□□ -2.51
Ptch1Q61115 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.6□□□□□ -2.51
Ptch1Q61115 Gm22984-201ENSMUST00000122751 122 ntBASIC-0.61□□□□□ -2.51
Ptch1Q61115 Mir6369-201ENSMUST00000183772 106 ntBASIC-0.61□□□□□ -2.51
Ptch1Q61115 Gm25793-201ENSMUST00000083287 107 ntBASIC-0.61□□□□□ -2.51
Ptch1Q61115 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC-0.62□□□□□ -2.51
Ptch1Q61115 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.62□□□□□ -2.51
Ptch1Q61115 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-0.62□□□□□ -2.51
Ptch1Q61115 Mir96-201ENSMUST00000083652 106 ntBASIC-0.62□□□□□ -2.51
Ptch1Q61115 Gm12469-201ENSMUST00000117623 207 ntBASIC-0.63□□□□□ -2.51
Ptch1Q61115 Gm22100-201ENSMUST00000157926 63 ntBASIC-0.63□□□□□ -2.51
Ptch1Q61115 Gm24192-201ENSMUST00000157978 145 ntBASIC-0.63□□□□□ -2.51
Ptch1Q61115 Gm25771-201ENSMUST00000158565 144 ntBASIC-0.63□□□□□ -2.51
Ptch1Q61115 Gm26290-201ENSMUST00000158891 145 ntBASIC-0.63□□□□□ -2.51
Ptch1Q61115 Gm27672-201ENSMUST00000183751 204 ntBASIC-0.63□□□□□ -2.51
Ptch1Q61115 Mir7043-201ENSMUST00000184219 70 ntBASIC-0.63□□□□□ -2.51
Ptch1Q61115 Gm38295-201ENSMUST00000191951 151 ntBASIC-0.63□□□□□ -2.51
Ptch1Q61115 AC129019.2-201ENSMUST00000222063 202 ntBASIC-0.63□□□□□ -2.51
Ptch1Q61115 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.63□□□□□ -2.51
Ptch1Q61115 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-0.63□□□□□ -2.51
Ptch1Q61115 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC-0.64□□□□□ -2.51
Ptch1Q61115 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.64□□□□□ -2.51
Ptch1Q61115 Gm22051-201ENSMUST00000117002 127 ntBASIC-0.64□□□□□ -2.51
Ptch1Q61115 Gm26482-201ENSMUST00000158015 62 ntBASIC-0.64□□□□□ -2.51
Ptch1Q61115 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.64□□□□□ -2.51
Ptch1Q61115 Mir30f-201ENSMUST00000196073 92 ntBASIC-0.64□□□□□ -2.51
Ptch1Q61115 n-R5s94-201ENSMUST00000082573 119 ntBASIC-0.64□□□□□ -2.51
Ptch1Q61115 Mir669i-201ENSMUST00000117007 127 ntBASIC-0.64□□□□□ -2.51
Retrieved 100 of 76,532 protein–RNA pairs in 214.5 ms